BLASTX 7.6.2
Query= UN80389 /QuerySize=669
(668 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing... 111 4e-025
TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing... 111 4e-025
TAIR9_protein||AT4G39240.1 | Symbols: | kelch repeat-containing... 110 1e-024
TAIR9_protein||AT5G02980.1 | Symbols: | kelch repeat-containing... 97 1e-020
TAIR9_protein||AT3G43710.1 | Symbols: | kelch repeat-containing... 92 2e-019
TAIR9_protein||AT5G03020.1 | Symbols: | kelch repeat-containing... 86 2e-017
TAIR9_protein||AT4G38940.1 | Symbols: | kelch repeat-containing... 84 7e-017
TAIR9_protein||AT1G60570.1 | Symbols: | kelch repeat-containing... 83 1e-016
TAIR9_protein||AT3G06570.1 | Symbols: | kelch repeat-containing... 75 4e-014
TAIR9_protein||AT4G39590.1 | Symbols: | kelch repeat-containing... 72 2e-013
TAIR9_protein||AT4G39570.1 | Symbols: | kelch repeat-containing... 72 4e-013
TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing... 70 1e-012
TAIR9_protein||AT3G08810.1 | Symbols: | kelch repeat-containing... 69 2e-012
TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing... 69 2e-012
TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing... 69 3e-012
TAIR9_protein||AT5G48990.1 | Symbols: | kelch repeat-containing... 68 4e-012
TAIR9_protein||AT5G49000.1 | Symbols: | FUNCTIONS IN: molecular... 67 7e-012
TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular... 67 7e-012
TAIR9_protein||AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 intera... 67 1e-011
TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing... 66 2e-011
>TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 111 bits (277), Expect = 4e-025
Identities = 78/206 (37%), Positives = 108/206 (52%), Gaps = 19/206 (9%)
Frame = +2
Query: 89 MSSKIRAEKKQSPSDP----------ITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSL 238
MSS ++ KK++ + P I SLP D+ + ILARV R DYP +SLVSK FRSL
Sbjct: 1 MSSPVKKMKKKTTTSPILSPTPHSTQILSLPVDLLISILARVSRLDYPILSLVSKSFRSL 60
Query: 239 VSSPEVYARRSSSGWAEHCLYISVRNVENGDDRLYTRI------GHRLALIPGLPDLPC- 397
++SPE+Y RS G E CLY+ + + + R +T GH +A I P
Sbjct: 61 IASPELYETRSLLGRTESCLYLCLGIPSDFNPRWFTLCRKPKPSGHVMAAISIPNSRPVH 120
Query: 398 CRSVVAVGSMIYVFGGLNFDDLKITSSAFSIDCRSHTVQPLSSMPFPMCEPVGAFMDGRI 577
C +VAVGS IY GG ++ +SS +DCR HT + +M +DG+I
Sbjct: 121 CSGLVAVGSDIYNIGGSIINE--HSSSVSILDCRYHTWRDAPNMLVERNSHAANVIDGKI 178
Query: 578 YVIGSDDFYSESKKVVVLNTETQTWE 655
YV G + S + V + +TQTWE
Sbjct: 179 YVAGGSRDSNSSNWMEVFDIKTQTWE 204
>TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 111 bits (277), Expect = 4e-025
Identities = 78/206 (37%), Positives = 108/206 (52%), Gaps = 19/206 (9%)
Frame = +2
Query: 89 MSSKIRAEKKQSPSDP----------ITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSL 238
MSS ++ KK++ + P I SLP D+ + ILARV R DYP +SLVSK FRSL
Sbjct: 1 MSSPVKKMKKKTTTSPILSPTPHSTQILSLPVDLLISILARVSRLDYPILSLVSKSFRSL 60
Query: 239 VSSPEVYARRSSSGWAEHCLYISVRNVENGDDRLYTRI------GHRLALIPGLPDLPC- 397
++SPE+Y RS G E CLY+ + + + R +T GH +A I P
Sbjct: 61 IASPELYETRSLLGRTESCLYLCLGIPSDFNPRWFTLCRKPKPSGHVMAAISIPNSRPVH 120
Query: 398 CRSVVAVGSMIYVFGGLNFDDLKITSSAFSIDCRSHTVQPLSSMPFPMCEPVGAFMDGRI 577
C +VAVGS IY GG ++ +SS +DCR HT + +M +DG+I
Sbjct: 121 CSGLVAVGSDIYNIGGSIINE--HSSSVSILDCRYHTWRDAPNMLVERNSHAANVIDGKI 178
Query: 578 YVIGSDDFYSESKKVVVLNTETQTWE 655
YV G + S + V + +TQTWE
Sbjct: 179 YVAGGSRDSNSSNWMEVFDIKTQTWE 204
>TAIR9_protein||AT4G39240.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18269599-18270726 REVERSE
Length = 376
Score = 110 bits (273), Expect = 1e-024
Identities = 71/175 (40%), Positives = 97/175 (55%), Gaps = 18/175 (10%)
Frame = +2
Query: 110 EKKQSPSDPITS----LPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSSS 277
+K+ PS +S LPD++ + LAR+P+ YP +SLVSK FR L++SPE+Y RS
Sbjct: 21 KKQHDPSPSCSSYLLLLPDEIILNCLARLPKCYYPVISLVSKTFRRLIASPEIYVERSLL 80
Query: 278 GWAEHCLYISVRNVENGDDRLYT---------RIGHRLALIPGLPDLPCC-RSVVAVGSM 427
E LY+ +R+ R YT HRL IP P +PC S+VA+ S
Sbjct: 81 RRTERVLYVVLRSHATETPRWYTLNFKPFGNDSNNHRLVPIPSFPSIPCWGMSIVAIDSE 140
Query: 428 IYVFGGLNFDDLKITSSAFSIDCRSHTVQPLSSMPFPM-CEPVGAFMDGRIYVIG 589
IYV GG D ++ S+ F ++C SHT + L SM C VG F DG++YVIG
Sbjct: 141 IYVLGGC--IDNELVSTGFVVECPSHTCRLLPSMKQARGCAAVG-FFDGKLYVIG 192
>TAIR9_protein||AT5G02980.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:697993-699000 FORWARD
Length = 336
Score = 97 bits (239), Expect = 1e-020
Identities = 68/188 (36%), Positives = 94/188 (50%), Gaps = 26/188 (13%)
Frame = +2
Query: 125 PSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSSSGWAEHCLYI 304
PS +SLP D+ + LARV R YP +SLVSK F+SL++S E+YA RS G E LYI
Sbjct: 10 PSRTFSSLPYDIILNCLARVSRYHYPTLSLVSKEFQSLIASRELYATRSRIGKTERFLYI 69
Query: 305 SVRNVENGDDRLYTRIGHRLALIPGLPD----LPC--------CRSVVAVGSMIYVFGGL 448
+ ++ +R +P +P+ LP +V + S IY+ GGL
Sbjct: 70 CLNLTKSNPK-------YRWFTLPPVPNEQKLLPVPLFTYHLNSSTVSSTDSEIYIIGGL 122
Query: 449 NFDDLKITSSAFSIDCRSHTVQPLSSMPFPMCEPVGAFMDGRIYVIGSDDFYSESKKVVV 628
+ + +S F DCRSH + L M FP +DG+IYVIG + E V
Sbjct: 123 VWGNRSKKASIF--DCRSHQTRRLPKMRFPRASAAAHVIDGKIYVIGGGEIRGE-----V 175
Query: 629 LNTETQTW 652
+ TQTW
Sbjct: 176 YDPTTQTW 183
>TAIR9_protein||AT3G43710.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:15605608-15606744 FORWARD
Length = 379
Score = 92 bits (228), Expect = 2e-019
Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 20/205 (9%)
Frame = +2
Query: 80 TPPMSSKI----RAEKKQSPSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSS 247
T P SK E+++S + I LPDD+ + LARVPR YP +SLVSKRFRS ++S
Sbjct: 3 TTPKRSKTLLMSNGEERRSMTFGIEMLPDDLVLSCLARVPRMYYPILSLVSKRFRSFLTS 62
Query: 248 PEVYARRSSSGWAEHCLYISVRNVENGDD-RLYT--RIGHRL--ALIPGL-PD-----LP 394
E+Y R+ G E L++ +R V + + RL+T R + L ++P L PD LP
Sbjct: 63 TELYQTRNLLGSTESFLFVCLRIVNDSNPLRLFTLCRRPNSLTKVMVPILSPDSIPKFLP 122
Query: 395 CCRSVVAVGSMIYVFGGLNFDDLKITSSAFSIDCRSHTVQPLSSMPFPMCEPVGAFMDGR 574
VV VGS IYV GGL ++ + +DCRSHT + P +DG+
Sbjct: 123 ---DVVLVGSNIYVIGGLINNN--ASHKVMVMDCRSHTWREAQGTCVARVSPSACVLDGK 177
Query: 575 IYVIGSDDFYSESKKVVVLNTETQT 649
IYV G + + V +T+T++
Sbjct: 178 IYVAGGCKNLDATMWMEVFDTKTES 202
>TAIR9_protein||AT5G03020.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:707263-708306 FORWARD
Length = 348
Score = 86 bits (210), Expect = 2e-017
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Frame = +2
Query: 89 MSSKIRAEKKQSPSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARR 268
M+ ++ E P +SLPDDV++ AR+ R YP +SLVSK FR+L++SPE+ A R
Sbjct: 1 MTEEMSKESPPPPPTSFSSLPDDVALDCRARISRFHYPTLSLVSKGFRTLIASPELEATR 60
Query: 269 SSSGWAEHCLYISVRNVENGDDR--LYTRIGHR--LALIPGLPD--LPCCRSVVAVGSMI 430
S G E+ L + +R +N + +++ I + ++P P+ P +VV+ GS I
Sbjct: 61 SFIGKPENHLCVCLRLYKNPNPLWFIFSPIPKQKLKPIVPWFPNQQYPQYPTVVSNGSQI 120
Query: 431 YVFGGLNFDDLKITSSAFSIDCRSHTVQPLSSMPFPMCEPVGAFMDGRIYVIG 589
Y+ GG F + ++ D R++ + L M P P + +DG+IYVIG
Sbjct: 121 YIIGG--FVRRRRSNRVSIFDYRTYQWRRLPKMRQPRVYPAASVIDGKIYVIG 171
>TAIR9_protein||AT4G38940.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18152848-18153960 FORWARD
Length = 371
Score = 84 bits (206), Expect = 7e-017
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +2
Query: 101 IRAEKKQSPSDP--ITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSS 274
IRA KKQ P P I+ LP+++ V I+ARVPR YP +S VS+RFRSLV+SPE+Y RRS
Sbjct: 7 IRAPKKQPPEPPCLISLLPEEIVVDIVARVPRCYYPTLSQVSRRFRSLVASPEIYKRRSF 66
Query: 275 SGWAEHCLYISVRNVENGDDRLYT 346
G E CLYI++ + D +T
Sbjct: 67 FGCTEQCLYIAISKDQTSDIHWFT 90
>TAIR9_protein||AT1G60570.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:22311836-22312981 FORWARD
Length = 382
Score = 83 bits (204), Expect = 1e-016
Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Frame = +2
Query: 137 ITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSSSGWAEHCLYISVRN 316
I SLP+++ + ILARV R Y +SLV KRF SL++S E+Y RS SG+ E+CLY+ +R
Sbjct: 22 IPSLPEELILSILARVSRLSYRSLSLVCKRFHSLLTSGEIYRFRSLSGYTENCLYVCLRF 81
Query: 317 VENGDDRLYTRIGHR-----LALIPGLPDLPCCRSVVAVGSMIYVFGG--LNFDDLKITS 475
G + + + L P +P S S I G + S
Sbjct: 82 SHTGRSHRWFMLREKNKSSGYVLAP----IPISHSPSLHASSIVAVGSKIYKIGGVMDGS 137
Query: 476 SAFSIDCRSHTVQPLSSMPFPMCEPVGAFMDGRIYVIGS--DDFYSESKKVVVLNTETQT 649
S +DC SH SM P +DG+IYV G Y+ SK + V + +T+T
Sbjct: 138 SVSILDCWSHRWLEAPSMQMERDRPSANLIDGKIYVTGGCHRGSYNPSKWMEVFDLKTET 197
Query: 650 W 652
W
Sbjct: 198 W 198
>TAIR9_protein||AT3G06570.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:2047369-2048541 REVERSE
Length = 391
Score = 75 bits (182), Expect = 4e-014
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +2
Query: 77 LTPPMSS-KIRAEKKQSPSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPE 253
L+PP+ KI A + QS S SLPDD+ + I+ARVPR + VSLV K FRSL+ SPE
Sbjct: 5 LSPPVKKRKIVAPQSQSASASFQSLPDDLILSIVARVPRLYHRTVSLVCKSFRSLLVSPE 64
Query: 254 VYARRSSSGWAEHCLYISV 310
+Y RS SG E CLY+S+
Sbjct: 65 LYKARSVSGHTESCLYLSI 83
>TAIR9_protein||AT4G39590.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18387515-18388723 REVERSE
Length = 403
Score = 72 bits (176), Expect = 2e-013
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Frame = +2
Query: 104 RAEKKQSPSDPIT-------SLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYA 262
R + K++PS P+T SLP+D+ + ARV R YP +S VSKRFRS+V+SPE+Y
Sbjct: 21 RKKNKETPS-PVTREPTSIDSLPNDLLLNCFARVSRMYYPALSRVSKRFRSIVTSPEIYN 79
Query: 263 RRSSSGWAEHCLYISVRNVENGDDRLYT-------RIGHRLALIPGLPDLPCCRS--VVA 415
RS E CLY+ +R + + +T + ++ L P P S +VA
Sbjct: 80 TRSLLNRTEKCLYLCLRFPFDNNTHWFTLYQNPNRTVSDKVFLQIPSPQYPLTLSSNLVA 139
Query: 416 VGSMIYVFGGLNFDD 460
VGS IY GG DD
Sbjct: 140 VGSNIYRIGGTVGDD 154
>TAIR9_protein||AT4G39570.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18384254-18385441 REVERSE
Length = 396
Score = 72 bits (174), Expect = 4e-013
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +2
Query: 77 LTPPMSSKIRAEKKQSP-SDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPE 253
+T + ++ +KK SP PI SLPDD+ V I ARV R YP +SLVSK FRSL+ SPE
Sbjct: 11 VTSTKNPSVKKKKKISPVPTPIPSLPDDLLVSIFARVSRLYYPILSLVSKSFRSLLRSPE 70
Query: 254 VYARRSSSGWAEHCLYISVR 313
+Y RS G E CLY+ ++
Sbjct: 71 LYETRSLLGRTESCLYLCLQ 90
>TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:6917020-6918138 FORWARD
Length = 345
Score = 70 bits (170), Expect = 1e-012
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +2
Query: 110 EKKQSPSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSSSGWAE 289
+K + P++ I SLP+D+ V ILARV R DYP +SLVSKRF S+++ PE+Y RS G E
Sbjct: 2 KKNKVPTELIFSLPNDLLVNILARVSRLDYPILSLVSKRFSSVLTLPELYQTRSLVGLTE 61
Query: 290 HCLYI 304
+CLY+
Sbjct: 62 NCLYV 66
>TAIR9_protein||AT3G08810.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:2675631-2676662 REVERSE
Length = 344
Score = 69 bits (167), Expect = 2e-012
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +2
Query: 104 RAEKKQSPSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSSSGW 283
R K S +P SLPDDV + I ARV R YP +S VS+ FRSL++SPE+Y RS SG
Sbjct: 12 RWSKPHSTQNPSPSLPDDVLLSIFARVSRLYYPTLSHVSESFRSLLASPELYKARSLSGN 71
Query: 284 AEHCLYISVR 313
E CLY+ +R
Sbjct: 72 TEICLYVCLR 81
>TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18380681-18381859 REVERSE
Length = 393
Score = 69 bits (167), Expect = 2e-012
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = +2
Query: 98 KIRAEKKQSP----SDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYAR 265
K + KK SP + P SLPDD+ V LARV R YP +SLVSK FRSL++SP++Y
Sbjct: 7 KRKTTKKPSPTPQSTTPNPSLPDDLVVSCLARVSRLYYPTLSLVSKSFRSLIASPDLYKT 66
Query: 266 RSSSGWAEHCLYISVRNVEN 325
RS G E CLY+ ++ ++
Sbjct: 67 RSLLGRTESCLYVCLQEKDS 86
>TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18385684-18386811 REVERSE
Length = 376
Score = 69 bits (166), Expect = 3e-012
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +2
Query: 146 LPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSSSGWAEHCLYISVRNVEN 325
LPDD+ + L+R+ R YP SLVSK FRSL++SPE+Y RS G E CLY+S+R + +
Sbjct: 26 LPDDILLSSLSRISRLYYPTFSLVSKSFRSLIASPELYQTRSILGRTESCLYVSLRLLND 85
Query: 326 GDDRLYT 346
+ R YT
Sbjct: 86 SNLRWYT 92
>TAIR9_protein||AT5G48990.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:19862340-19863458 FORWARD
Length = 373
Score = 68 bits (165), Expect = 4e-012
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = +2
Query: 89 MSSKIRAEKKQSPSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARR 268
MSS + KK S P SLP+D+ V ILARV R Y +S+VSK FRS+++SPE+Y R
Sbjct: 1 MSSPEKKRKKNQKSSPNPSLPEDLIVSILARVSRSYYTNLSVVSKTFRSILTSPELYKTR 60
Query: 269 SSSGWAEHCLYISVRNVENGDDR 337
+ G E LY+ +R + + R
Sbjct: 61 TLLGKPETFLYVCLRFPDEANPR 83
>TAIR9_protein||AT5G49000.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing F-box family protein
(TAIR:AT4G39550.1); Has 1294 Blast hits to 1195 proteins in 89 species:
Archae - 4; Bacteria - 28; Metazoa - 685; Fungi - 4; Plants - 527;
Viruses - 11; Other Eukaryotes - 35 (source: NCBI BLink). |
chr5:19864527-19865645 FORWARD
Length = 329
Score = 67 bits (163), Expect = 7e-012
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Frame = +2
Query: 89 MSSKIRAEKKQS-----PSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPE 253
MSS R KK+S S P SLPDD+ V ILARV R YP +SLVSK R+LV+SPE
Sbjct: 1 MSSPERKRKKRSLEPSPESTPNPSLPDDLIVSILARVSRLYYPILSLVSKSSRTLVTSPE 60
Query: 254 VYARRSSSGWAEHCLYISVRNVENGDDRLYT 346
+Y RS E CLY+ + + + R +T
Sbjct: 61 LYKTRSFFNRTESCLYVCLDFPPDPNPRWFT 91
>TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing F-box family protein
(TAIR:AT4G39550.1); Has 5235 Blast hits to 3308 proteins in 165
species: Archae - 10; Bacteria - 167; Metazoa - 4114; Fungi - 13;
Plants - 659; Viruses - 110; Other Eukaryotes - 162 (source: NCBI
BLink). | chr5:19864527-19865645 FORWARD
Length = 373
Score = 67 bits (163), Expect = 7e-012
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Frame = +2
Query: 89 MSSKIRAEKKQS-----PSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPE 253
MSS R KK+S S P SLPDD+ V ILARV R YP +SLVSK R+LV+SPE
Sbjct: 1 MSSPERKRKKRSLEPSPESTPNPSLPDDLIVSILARVSRLYYPILSLVSKSSRTLVTSPE 60
Query: 254 VYARRSSSGWAEHCLYISVRNVENGDDRLYT 346
+Y RS E CLY+ + + + R +T
Sbjct: 61 LYKTRSFFNRTESCLYVCLDFPPDPNPRWFT 91
>TAIR9_protein||AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 interacting partner
6); ubiquitin-protein ligase | chr2:9353526-9354644 REVERSE
Length = 373
Score = 67 bits (161), Expect = 1e-011
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Frame = +2
Query: 92 SSKIRAEKKQSPSDPITSLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRS 271
SS + +SP+ I L +DV++ LARVPR YP +SLVSK FRSL +SP +YA R+
Sbjct: 6 SSGDEPPETKSPAQLIPLLSEDVALSCLARVPRCHYPILSLVSKTFRSLPTSPLLYATRA 65
Query: 272 SSGWAEHCLYISVRNVENGDDRLYTRIGHRLALIPG---LPDLPCCRSVVAVGSMIYV 436
G E+ LY+++R +T + L+ L +P C S VGS V
Sbjct: 66 LVGATENILYVAIRIPPESGACWFTLLHRTLSNSTNSKMLVPIPSCPSPSLVGSAYVV 123
>TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18389436-18390539 REVERSE
Length = 368
Score = 66 bits (159), Expect = 2e-011
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +2
Query: 143 SLPDDVSVGILARVPRDDYPRVSLVSKRFRSLVSSPEVYARRSSSGWAEHCLYISVRNVE 322
SLP+D+ V LARV R YP +SLVSK FRSL++SP++Y RS G E CLY+ +R
Sbjct: 16 SLPEDLVVSCLARVSRLYYPTLSLVSKSFRSLIASPDLYKTRSLLGRTESCLYLCLRYSP 75
Query: 323 NGDDRLYT 346
+ R +T
Sbjct: 76 EDNPRWFT 83
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|
