BLASTX 7.6.2
Query= UN80417 /QuerySize=774
(773 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297806513|ref|XP_002871140.1| hypothetical protein ARALYDRAFT... 86 5e-015
gi|42567655|ref|NP_196133.3| Transcription elongation factor (TF... 84 2e-014
gi|297829634|ref|XP_002882699.1| hypothetical protein ARALYDRAFT... 77 2e-012
gi|255552481|ref|XP_002517284.1| conserved hypothetical protein ... 75 9e-012
gi|224139684|ref|XP_002323227.1| predicted protein [Populus tric... 74 3e-011
gi|224139692|ref|XP_002323230.1| predicted protein [Populus tric... 74 3e-011
gi|6630548|gb|AAF19567.1|AC011708_10 hypothetical protein [Arabi... 72 8e-011
gi|186509965|ref|NP_187693.2| transcription elongation factor-li... 72 8e-011
gi|224089941|ref|XP_002308874.1| predicted protein [Populus tric... 72 8e-011
gi|334185233|ref|NP_001189856.1| transcription elongation factor... 72 8e-011
gi|297791353|ref|XP_002863561.1| predicted protein [Arabidopsis ... 64 3e-008
gi|255647376|gb|ACU24154.1| unknown [Glycine max] 63 5e-008
gi|297807211|ref|XP_002871489.1| hypothetical protein ARALYDRAFT... 60 2e-007
>gi|297806513|ref|XP_002871140.1| hypothetical protein ARALYDRAFT_487303
[Arabidopsis lyrata subsp. lyrata]
Length = 436
Score = 86 bits (211), Expect = 5e-015
Identities = 47/60 (78%), Positives = 50/60 (83%), Gaps = 5/60 (8%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGEDEG 634
IF IIDHAIMVAATDCPNKFKSRRDKIAELL SCRV+R C GC H +LSVP G+DEG
Sbjct: 21 IFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVSR-CIGC---DHLELSVP-GDDEG 75
>gi|42567655|ref|NP_196133.3| Transcription elongation factor (TFIIS) family
protein [Arabidopsis thaliana]
Length = 436
Score = 84 bits (207), Expect = 2e-014
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGED 628
IF IIDHAIMVAATDCPNKFKSRRDKIAELL SCRV R C GC H +LSVPG ++
Sbjct: 22 IFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNR-CVGC---DHLELSVPGDDE 75
>gi|297829634|ref|XP_002882699.1| hypothetical protein ARALYDRAFT_317880
[Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 77 bits (188), Expect = 2e-012
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGEDEG 634
IF IIDHAIMVAA D PN+FKSRRD+IAELL SCRV+R C GC H +LS+ G E+
Sbjct: 21 IFGIIDHAIMVAAADWPNEFKSRRDRIAELLFSCRVSR-CIGC---DHLELSIAGDEEAN 76
Query: 635 ------VDVGAGSKESKANSSRGDNNHTNQIVSNNYNNYD 736
VG G + + D + IV N D
Sbjct: 77 HGCRTVETVGGGGDRDDSGVATDDGEEASVIVDEVMRNRD 116
>gi|255552481|ref|XP_002517284.1| conserved hypothetical protein [Ricinus
communis]
Length = 473
Score = 75 bits (183), Expect = 9e-012
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGEDEG 634
IF IIDHAIMVAA+DCP +F+ RRD+IAE L SCR+TR C+GC +H L+VP E E
Sbjct: 20 IFAIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRLTR-CSGC---NHVDLAVPAHEGEN 75
Query: 635 VDVGA 649
D GA
Sbjct: 76 DDGGA 80
>gi|224139684|ref|XP_002323227.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 74 bits (179), Expect = 3e-011
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPG-GEDE 631
IF IIDHAI+VAA+DCP +FK RRD+IAE L SCR+ + C+GC + +L+VPG EDE
Sbjct: 20 IFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIK-CSGC---NQVELAVPGHDEDE 75
Query: 632 GVDVGAGSKESKANSSRGDNN 694
D G SK ++S D++
Sbjct: 76 RDDRGCCSKRRDGDNSGSDDD 96
>gi|224139692|ref|XP_002323230.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 74 bits (179), Expect = 3e-011
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPG-GEDE 631
IF IIDHAI+VAA+DCP +FK RRD+IAE L SCR+ + C+GC + +L+VPG EDE
Sbjct: 20 IFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIK-CSGC---NQVELAVPGHDEDE 75
Query: 632 GVDVGAGSKESKANSSRGDNN 694
D G SK ++S D++
Sbjct: 76 RDDRGCCSKRRDGDNSGSDDD 96
>gi|6630548|gb|AAF19567.1|AC011708_10 hypothetical protein [Arabidopsis
thaliana]
Length = 416
Score = 72 bits (175), Expect = 8e-011
Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGED-- 628
IF IIDHAIMVAA D P +FKSR D+IAELL SC+V+R C GC H +LS+ G E
Sbjct: 24 IFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSR-CIGC---DHLELSIAGDEAAV 79
Query: 629 EGVDVGAGSKESKANSSRGDNNHTNQIVS------NNYNNYDDEAE 748
E V VG G + + G+ + V + +N DDE +
Sbjct: 80 EIVGVGGGGDRGDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKD 125
>gi|186509965|ref|NP_187693.2| transcription elongation factor-like protein
[Arabidopsis thaliana]
Length = 288
Score = 72 bits (175), Expect = 8e-011
Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGED-- 628
IF IIDHAIMVAA D P +FKSR D+IAELL SC+V+R C GC H +LS+ G E
Sbjct: 24 IFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSR-CIGC---DHLELSIAGDEAAV 79
Query: 629 EGVDVGAGSKESKANSSRGDNNHTNQIVS------NNYNNYDDEAE 748
E V VG G + + G+ + V + +N DDE +
Sbjct: 80 EIVGVGGGGDRGDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKD 125
>gi|224089941|ref|XP_002308874.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 72 bits (175), Expect = 8e-011
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGEDEG 634
IF IIDHAI+VAA+DCP +FK RRD+IAE L SCR+ + C+GC + +L+VP G DEG
Sbjct: 20 IFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIK-CSGC---NRVELAVP-GHDEG 74
Query: 635 V--DVGAGSKESKANSSRG 685
V D G SK ++S G
Sbjct: 75 VSDDGGCCSKRRDGDNSGG 93
>gi|334185233|ref|NP_001189856.1| transcription elongation factor-like protein
[Arabidopsis thaliana]
Length = 580
Score = 72 bits (175), Expect = 8e-011
Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGED-- 628
IF IIDHAIMVAA D P +FKSR D+IAELL SC+V+R C GC H +LS+ G E
Sbjct: 24 IFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSR-CIGC---DHLELSIAGDEAAV 79
Query: 629 EGVDVGAGSKESKANSSRGDNNHTNQIVS------NNYNNYDDEAE 748
E V VG G + + G+ + V + +N DDE +
Sbjct: 80 EIVGVGGGGDRGDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKD 125
>gi|297791353|ref|XP_002863561.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 149
Score = 64 bits (153), Expect = 3e-008
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Frame = +2
Query: 482 MVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGEDEGVDVGAGSKE 661
MVAATDCPNKFKSR DKIAELL SCRV+R C GC H +LS+ G D+ + G G+
Sbjct: 1 MVAATDCPNKFKSRGDKIAELLFSCRVSR-CIGC---DHLELSIHG--DDEANRGRGTTG 54
Query: 662 SKANSSRGDNNH 697
+ D ++
Sbjct: 55 DGGGGTAVDEDY 66
>gi|255647376|gb|ACU24154.1| unknown [Glycine max]
Length = 336
Score = 63 bits (151), Expect = 5e-008
Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Frame = +2
Query: 455 IFEIIDHAIMVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGEDE 631
IF IIDHAIMVAA+DCP +F RRD IAE L SCR++R C GC +L+VP +D+
Sbjct: 22 IFGIIDHAIMVAASDCPKEFTLRRDGIAERLFSCRLSR-CLGC---ERVELAVPVDDDD 76
>gi|297807211|ref|XP_002871489.1| hypothetical protein ARALYDRAFT_909137
[Arabidopsis lyrata subsp. lyrata]
Length = 155
Score = 60 bits (145), Expect = 2e-007
Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Frame = +2
Query: 482 MVAATDCPNKFKSRRDKIAELLSSCRVTRCCTGCHHHHHRKLSVPGGEDEGVDVGAGSKE 661
MVAATDCPNKFKS DK A+LL SCRV R C GC H +LSVPG D+ + G G+
Sbjct: 1 MVAATDCPNKFKSIGDKFAQLLFSCRVGR-CIGC---DHLELSVPG--DDEANRGRGTTG 54
Query: 662 SKANSSRGDNNH 697
+ D ++
Sbjct: 55 DGGGGTAVDEDY 66
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,178,980,611,991
Number of Sequences: 15229318
Number of Extensions: 1178980611991
Number of Successful Extensions: 310660920
Number of sequences better than 0.0: 0
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