BLASTX 7.6.2
Query= UN80461 /QuerySize=725
(724 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport facto... 167 7e-042
TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport facto... 167 7e-042
TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport facto... 106 2e-023
TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport facto... 106 2e-023
TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport facto... 99 2e-021
TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport facto... 99 2e-021
TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport facto... 93 1e-019
TAIR9_protein||AT3G55540.1 | Symbols: | nuclear transport facto... 90 1e-018
TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport facto... 88 5e-018
>TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035007 FORWARD
Length = 390
Score = 167 bits (422), Expect = 7e-042
Identities = 97/186 (52%), Positives = 128/186 (68%), Gaps = 9/186 (4%)
Frame = +2
Query: 179 SEEGVHEAHKVSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINK 358
+E V A ++ FV QYY ++G+L HEA RLYVDASVVSRP GT++SFTS+E INK
Sbjct: 3 TEGVVPSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINK 62
Query: 359 HFLSCD-STTTFEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVV 535
H LSCD T FEVLS +Q+S+E+GIFI VIGF+ G+DN +RKFSQMFYLARQNT VV
Sbjct: 63 HILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LVV 121
Query: 536 VNDIFRYVDDEESS---TPAAAVVESVAETEWW--SQSMLLLKQDVSEVKSCYPLDMGVQ 700
+ND+ RYVD E+SS TP V E V + ++ L +++V+ V+ ++ V+
Sbjct: 122 LNDMLRYVDQEDSSTTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEK--SVNAAVE 179
Query: 701 KSAETL 718
K+A L
Sbjct: 180 KNAAPL 185
>TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035301 FORWARD
Length = 428
Score = 167 bits (422), Expect = 7e-042
Identities = 97/186 (52%), Positives = 128/186 (68%), Gaps = 9/186 (4%)
Frame = +2
Query: 179 SEEGVHEAHKVSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINK 358
+E V A ++ FV QYY ++G+L HEA RLYVDASVVSRP GT++SFTS+E INK
Sbjct: 3 TEGVVPSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINK 62
Query: 359 HFLSCD-STTTFEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVV 535
H LSCD T FEVLS +Q+S+E+GIFI VIGF+ G+DN +RKFSQMFYLARQNT VV
Sbjct: 63 HILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LVV 121
Query: 536 VNDIFRYVDDEESS---TPAAAVVESVAETEWW--SQSMLLLKQDVSEVKSCYPLDMGVQ 700
+ND+ RYVD E+SS TP V E V + ++ L +++V+ V+ ++ V+
Sbjct: 122 LNDMLRYVDQEDSSTTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEK--SVNAAVE 179
Query: 701 KSAETL 718
K+A L
Sbjct: 180 KNAAPL 185
>TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 423
Score = 106 bits (263), Expect = 2e-023
Identities = 54/137 (39%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Frame = +2
Query: 209 VSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINKHFLSCD-STT 385
V FV +YY + T E H+ Y++ S++SRPG DG +++ S++ IN +S D ++
Sbjct: 15 VGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLKGINDQIMSIDYKSS 74
Query: 386 TFEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVVVNDIFRYVDD 565
E+L+A +QS+++ G+ V G +IG D +RKFSQ F+L +N +Y V+ND FRYV D
Sbjct: 75 RIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYVSD 134
Query: 566 EESSTPAAAVVESVAET 616
E A VE T
Sbjct: 135 EFVEPEATKEVEESQST 151
>TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 424
Score = 106 bits (263), Expect = 2e-023
Identities = 54/137 (39%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Frame = +2
Query: 209 VSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINKHFLSCD-STT 385
V FV +YY + T E H+ Y++ S++SRPG DG +++ S++ IN +S D ++
Sbjct: 15 VGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLKGINDQIMSIDYKSS 74
Query: 386 TFEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVVVNDIFRYVDD 565
E+L+A +QS+++ G+ V G +IG D +RKFSQ F+L +N +Y V+ND FRYV D
Sbjct: 75 RIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYVSD 134
Query: 566 EESSTPAAAVVESVAET 616
E A VE T
Sbjct: 135 EFVEPEATKEVEESQST 151
>TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 460
Score = 99 bits (246), Expect = 2e-021
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Frame = +2
Query: 200 AHKVSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINKHFLSCD- 376
A V AFV QYY I+ + HR Y D+S ++RP G V + T+++ IN LS
Sbjct: 12 AEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQAINDKILSLKY 71
Query: 377 STTTFEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVVVNDIFRY 556
T E+ +A Q S E G+ + V G L G DN+++KFSQ F+LA Q+ Y V+ND+FR+
Sbjct: 72 EDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRF 131
Query: 557 VDDEESSTPAAAV 595
++++E + A +V
Sbjct: 132 LEEKEVTAQARSV 144
>TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 461
Score = 99 bits (246), Expect = 2e-021
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Frame = +2
Query: 200 AHKVSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINKHFLSCD- 376
A V AFV QYY I+ + HR Y D+S ++RP G V + T+++ IN LS
Sbjct: 12 AEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQAINDKILSLKY 71
Query: 377 STTTFEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVVVNDIFRY 556
T E+ +A Q S E G+ + V G L G DN+++KFSQ F+LA Q+ Y V+ND+FR+
Sbjct: 72 EDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRF 131
Query: 557 VDDEESSTPAAAV 595
++++E + A +V
Sbjct: 132 LEEKEVTAQARSV 144
>TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:4710519-4712332 FORWARD
Length = 429
Score = 93 bits (230), Expect = 1e-019
Identities = 47/131 (35%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +2
Query: 179 SEEGVHEAHKVSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINK 358
S V + + + +FV +YY ++ K + H+ Y+D SV+ RPG DG ++S S++ IN+
Sbjct: 5 SNAPVVDPNTIGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLKAINE 64
Query: 359 HFLSCD-STTTFEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVV 535
+S D + ++L+A +Q+S G+ V G L ++ + +FSQ F+L N +Y V
Sbjct: 65 QIMSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNGSYFV 124
Query: 536 VNDIFRYVDDE 568
+ND+FRYV DE
Sbjct: 125 LNDVFRYVADE 135
>TAIR9_protein||AT3G55540.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein | chr3:20598218-20599614 FORWARD
Length = 335
Score = 90 bits (222), Expect = 1e-018
Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 7/131 (5%)
Frame = +2
Query: 191 VHEAHKVSEAFVAQYYPIVGKLTHEAHRL-YVDASVVSRPGPDGTVLSFTSIEDINKHFL 367
++ + ++ F+ Y+ +G + Y D SV++RPGPDGT++SFTS E I + +
Sbjct: 26 LNTSEALANCFLQSYFLNLGVYPEVVQMMWYADDSVMTRPGPDGTMMSFTSPEAIQEQIV 85
Query: 368 SCD-STTTFEVLSAYTQS---SMEEGIFITVIGFLIGED-NLKRKFSQMFYLA-RQNTAY 529
SCD +F+V+S QS S E+G FI V GFL +D ++R+F Q YLA RQ+ +Y
Sbjct: 86 SCDYEGASFDVMSFAAQSCNTSSEDGAFIMVTGFLTCKDKQVRRRFVQSLYLARRQDRSY 145
Query: 530 VVVNDIFRYVD 562
+VND RY+D
Sbjct: 146 AIVNDFLRYID 156
Score = 63 bits (152), Expect = 1e-010
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Frame = +2
Query: 212 SEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDG--TVLSFTSIEDINKHFLSCDSTT 385
S FV YY + + E +YV+ S++SRP T++ ++ INK +
Sbjct: 167 SAGFVKVYYEL--PMREELGLMYVNESIMSRPTSTSGRTMVEMPGLDAINKRVSNEHKRA 224
Query: 386 TFEVLSA---YTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLAR-QNTAYVVVNDIFR 553
+ +L++ S ++ +FI V GF+ +D +RKF Q FY+ R N +YV+ NDI R
Sbjct: 225 SNFILNSVDYQISRSFKDRMFIMVCGFVTLDDKTERKFLQFFYVTRCHNGSYVIYNDILR 284
Query: 554 YV-----DDEESSTPAAA 592
YV D ESS+ +AA
Sbjct: 285 YVDVTPRDTLESSSQSAA 302
>TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:2300579-2308305 REVERSE
Length = 1295
Score = 88 bits (216), Expect = 5e-018
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 6/141 (4%)
Frame = +2
Query: 209 VSEAFVAQYYPIVGKLTHEAHRLYVDASVVSRPGPDGTVLSFTSIEDINKHFLSCDSTTT 388
V + F QYY + ++LY D S +SRPG DGT+ FT +D+ + S S +
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDLK--WRSPGSFDS 338
Query: 389 FEVLSAYTQSSMEEGIFITVIGFLIGEDNLKRKFSQMFYLARQNTAYVVVNDIFRYVDDE 568
++ S +Q S+++GI + V G+L + R F+Q+F+L Q Y+V D+FR+VD
Sbjct: 339 VKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKGYIVCTDMFRFVDIP 398
Query: 569 ESST---PAAAVV-ESVAETE 619
E++ PA V+ E V ETE
Sbjct: 399 EANAAIPPANDVIEEKVPETE 419
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|
