BLASTX 7.6.2
Query= UN80558 /QuerySize=788
(787 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 282 3e-076
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 282 bits (719), Expect = 3e-076
Identities = 155/197 (78%), Positives = 163/197 (82%), Gaps = 14/197 (7%)
Frame = +2
Query: 92 MAVSTVTSFILPSF------PNPTRHKVPLLSLFPSSSSTHGSIGSSLLNKPSPLFTNKV 253
MAVSTV+SF+LPSF P+ TR KV LL SSSTHG + S +L KPS T KV
Sbjct: 1 MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLL----PSSSTHGGLSSCVLTKPSVSLT-KV 55
Query: 254 FAAPETI---YEQSSEEFSEVLSSSSISVDSDKMAPKQKIRIKLRSYWVPLIEDSCKQIL 424
FA P+T+ E E SEV SSSSISVD+DKMAPKQKIRIKLRSYWVPLIEDSCKQIL
Sbjct: 56 FAVPDTLDPTPEILDEPASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQIL 115
Query: 425 DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDS 604
DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDS
Sbjct: 116 DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDS 175
Query: 605 LMQLDLPAGVDVEVKL* 655
LMQLDLPAGVDVEVKL*
Sbjct: 176 LMQLDLPAGVDVEVKL* 192
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 359 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 535
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 536 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 652
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 359 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 535
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 536 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 652
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 359 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 535
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 536 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 652
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 359 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 535
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 536 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 652
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 359 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 535
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 536 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 652
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 359 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 535
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 536 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 652
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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