BLASTX 7.6.2
Query= UN80560 /QuerySize=699
(698 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G03600.1 | Symbols: | photosystem II family p... 285 2e-077
>TAIR9_protein||AT1G03600.1 | Symbols: | photosystem II family protein |
chr1:898916-899440 FORWARD
Length = 175
Score = 285 bits (728), Expect = 2e-077
Identities = 149/177 (84%), Positives = 163/177 (92%), Gaps = 2/177 (1%)
Frame = +3
Query: 12 MASASPTAALLKPSSVPPQHKPVITASVSPPLPPPRRHNLLRRDVLSLSAATTLLLTQSL 191
MASAS TA LLKP ++PP +I +SVSPPLPPPRR++LLRRD LSL AAT+ LLTQS+
Sbjct: 1 MASASATATLLKP-NLPPHKPTIIASSVSPPLPPPRRNHLLRRDFLSL-AATSTLLTQSI 58
Query: 192 PFLAPSPASAAEDEEYVKDTSAVISKVRTTLSMERTDPNVADAVAELREASNSWVAKYRK 371
FLAP+P SAAEDEEY+KDTSAVISKVR+TLSM++TDPNVADAVAELREASNSWVAKYRK
Sbjct: 59 QFLAPAPVSAAEDEEYIKDTSAVISKVRSTLSMQKTDPNVADAVAELREASNSWVAKYRK 118
Query: 372 EKALLGKASFRDIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKALSRGR* 542
EKALLGKASFRDIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKAL+RGR*
Sbjct: 119 EKALLGKASFRDIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKALTRGR* 175
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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