BLASTX 7.6.2
Query= UN80647 /QuerySize=433
(432 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G28610.1 | Symbols: | FUNCTIONS IN: molecular... 179 9e-046
TAIR9_protein||AT5G28630.1 | Symbols: | glycine-rich protein | ... 174 3e-044
TAIR9_protein||AT5G66540.1 | Symbols: | FUNCTIONS IN: molecular... 57 5e-009
TAIR9_protein||AT4G02810.1 | Symbols: | unknown protein | chr4:... 56 7e-009
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 56 7e-009
>TAIR9_protein||AT5G28610.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, seed,
leaf; EXPRESSED DURING: E expanded cotyledon stage, LP.12 twelve leaves
visible; BEST Arabidopsis thaliana protein match is: glycine-rich
protein (TAIR:AT5G28630.1); Has 1909 Blast hits to 1356 proteins in 121
species: Archae - 0; Bacteria - 8; Metazoa - 1295; Fungi - 112; Plants
- 60; Viruses - 39; Other Eukaryotes - 395 (source: NCBI BLink). |
chr5:10610976-10611347 FORWARD
Length = 124
Score = 179 bits (452), Expect = 9e-046
Identities = 91/126 (72%), Positives = 101/126 (80%), Gaps = 11/126 (8%)
Frame = +1
Query: 55 ETAHVERGIRESSPEKKKEKSHKHRGIFHLHHHSKDEKEEDKKKEGSKREKIAAAMVGLG 234
E AH+ERGI +SSPEK+ K+HKHRG+FHLHHHSKDEK+EDKKKEGSKREKIAAAMVGLG
Sbjct: 2 EAAHIERGI-DSSPEKEMAKTHKHRGLFHLHHHSKDEKDEDKKKEGSKREKIAAAMVGLG 60
Query: 235 ATLKKIKPKGRHGGGGNHEGGGEEEEEEEEEQEEQEEEEEEEEEEEEGDDGGDEEGGGKF 414
ATLKK+K HG GG +EE+E +EEE EEEEEEEE DDGGDEE GGKF
Sbjct: 61 ATLKKVKHPRHHGSGG----------QEEQEGAAEEEEVEEEEEEEEEDDGGDEEEGGKF 110
Query: 415 SAFISM 432
SAFISM
Sbjct: 111 SAFISM 116
>TAIR9_protein||AT5G28630.1 | Symbols: | glycine-rich protein |
chr5:10636690-10637136 FORWARD
Length = 149
Score = 174 bits (439), Expect = 3e-044
Identities = 97/143 (67%), Positives = 106/143 (74%), Gaps = 10/143 (6%)
Frame = +1
Query: 28 MEKQLDETVETAHVERGI--RESSPEKKKEKSHKHRGIFHLHHHSKDEKEEDKKKEGSKR 201
MEK+L E+ + ERGI +SSPEK+KEKSHKHRG+FHL HHSKDEK+ DKKKEGSKR
Sbjct: 1 MEKELHESKVATYTERGIGSHDSSPEKEKEKSHKHRGLFHL-HHSKDEKDGDKKKEGSKR 59
Query: 202 EKIAAAMVGLGATLKKIKPKG------RHGGGGNHEGGGEEEEEEEEEQEEQEEEEEEEE 363
EKIAAAMVGLGAT K K KG R GGGG E GG EEE EEEE E EEEEEE
Sbjct: 60 EKIAAAMVGLGATFMKKKHKGGGKKEKRGGGGGKEEEGGGEEEGEEEE-ESSSSEEEEEE 118
Query: 364 EEEEGDDGGDEEGGGKFSAFISM 432
EE G G +EEGGGKFSAFI+M
Sbjct: 119 EEGGGGGGDEEEGGGKFSAFITM 141
>TAIR9_protein||AT5G66540.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus,
nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth
stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar
ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10
protein (InterPro:IPR007151); Has 76240 Blast hits to 38667 proteins in
1479 species: Archae - 252; Bacteria - 6537; Metazoa - 31185; Fungi -
9935; Plants - 3937; Viruses - 750; Other Eukaryotes - 23644 (source:
NCBI BLink). | chr5:26556653-26559310 REVERSE
Length = 525
Score = 57 bits (135), Expect = 5e-009
Identities = 24/39 (61%), Positives = 35/39 (89%)
Frame = +1
Query: 283 NHEGGGEEEEEEEEEQEEQEEEEEEEEEEEEGDDGGDEE 399
+++ GE+EEEEEE++EE+EEEEEEEEEE++GD+ G E+
Sbjct: 133 SNDSEGEDEEEEEEDEEEEEEEEEEEEEEKDGDNEGIED 171
>TAIR9_protein||AT4G02810.1 | Symbols: | unknown protein | chr4:1256253-1257068
FORWARD
Length = 272
Score = 56 bits (134), Expect = 7e-009
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1
Query: 301 EEEEEEEEEQEEQEEEEEEEEEEEEGDDGGDEEGGGK 411
EEEEEEEEE+EE+EEEEEEEEE+EEG G +E GK
Sbjct: 199 EEEEEEEEEEEEEEEEEEEEEEDEEGIVGNNENFEGK 235
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 56 bits (134), Expect = 7e-009
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 280 GNHEGGGEEEEEEEEEQEEQEEEEEEEEEEEEGDDGGDEE 399
G E EEEEEEEEE+EE+EEEEEEEEEEEE ++ +EE
Sbjct: 5 GEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 44
Score = 56 bits (133), Expect = 9e-009
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +1
Query: 301 EEEEEEEEEQEEQEEEEEEEEEEEEGDDGGDEEGGGKFSAFI 426
EEEEEEEEE+EE+EEEEEEEEEEEE ++ D E + AF+
Sbjct: 37 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDREREERAFAFV 78
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|