BLASTX 7.6.2
Query= UN80853 /QuerySize=679
(678 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|9295701|gb|AAF87007.1|AC005292_16 F26F24.25 [Arabidopsis thal... 110 3e-022
gi|42570557|ref|NP_850951.2| homeobox protein knotted-1-like 6 [... 110 3e-022
gi|8778590|gb|AAF79598.1|AC007945_18 F28C11.2 [Arabidopsis thali... 110 3e-022
gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNA... 108 8e-022
gi|145336056|ref|NP_173752.3| homeobox protein knotted-1-like 6 ... 108 8e-022
gi|297850804|ref|XP_002893283.1| hypothetical protein ARALYDRAFT... 106 5e-021
gi|297838847|ref|XP_002887305.1| hypothetical protein ARALYDRAFT... 65 1e-008
gi|984046|emb|CAA57122.1| ATK1 [Arabidopsis thaliana] 59 7e-007
gi|25386225|pir||A96729 homeotic protein (ATK1), 26548-32058 [im... 59 7e-007
gi|42563111|ref|NP_177208.2| homeobox protein knotted-1-like 2 [... 59 7e-007
>gi|9295701|gb|AAF87007.1|AC005292_16 F26F24.25 [Arabidopsis thaliana]
Length = 324
Score = 110 bits (273), Expect = 3e-022
Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 3/76 (3%)
Frame = -1
Query: 435 ALLLS--GDNRVSDVFGSDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACH 262
ALL S G+NRVSDVFGSDEL SVA SA +SS AS+AP IRRND NVSL VIKAKIACH
Sbjct: 31 ALLCSSAGENRVSDVFGSDELLSVAVSA-LSSEAASIAPEIRRNDDNVSLTVIKAKIACH 89
Query: 261 PAYPRLLQAYMDCQKV 214
P+YPRLLQAY+DCQKV
Sbjct: 90 PSYPRLLQAYIDCQKV 105
>gi|42570557|ref|NP_850951.2| homeobox protein knotted-1-like 6 [Arabidopsis
thaliana]
Length = 327
Score = 110 bits (273), Expect = 3e-022
Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 3/76 (3%)
Frame = -1
Query: 435 ALLLS--GDNRVSDVFGSDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACH 262
ALL S G+NRVSDVFGSDEL SVA SA +SS AS+AP IRRND NVSL VIKAKIACH
Sbjct: 34 ALLCSSAGENRVSDVFGSDELLSVAVSA-LSSEAASIAPEIRRNDDNVSLTVIKAKIACH 92
Query: 261 PAYPRLLQAYMDCQKV 214
P+YPRLLQAY+DCQKV
Sbjct: 93 PSYPRLLQAYIDCQKV 108
Score = 59 bits (142), Expect = 4e-007
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -2
Query: 539 MDGMYGFQPTCDYSDKAGMMMLPDNLMFPSDYRTLLCSS 423
MDGMY F DYSDK+ +MM P++LMFPSDY+ LLCSS
Sbjct: 1 MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSS 39
>gi|8778590|gb|AAF79598.1|AC007945_18 F28C11.2 [Arabidopsis thaliana]
Length = 344
Score = 110 bits (273), Expect = 3e-022
Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 3/76 (3%)
Frame = -1
Query: 435 ALLLS--GDNRVSDVFGSDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACH 262
ALL S G+NRVSDVFGSDEL SVA SA +SS AS+AP IRRND NVSL VIKAKIACH
Sbjct: 31 ALLCSSAGENRVSDVFGSDELLSVAVSA-LSSEAASIAPEIRRNDDNVSLTVIKAKIACH 89
Query: 261 PAYPRLLQAYMDCQKV 214
P+YPRLLQAY+DCQKV
Sbjct: 90 PSYPRLLQAYIDCQKV 105
>gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
Length = 326
Score = 108 bits (269), Expect = 8e-022
Identities = 59/75 (78%), Positives = 64/75 (85%), Gaps = 3/75 (4%)
Frame = -1
Query: 435 ALLLS--GDNRVSDVFGSDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACH 262
ALL S G+NRVSDVFGSDEL SVA SA +SS AS+AP IRRND NVSL VIKAKIACH
Sbjct: 31 ALLCSSAGENRVSDVFGSDELLSVAVSA-LSSEAASIAPEIRRNDDNVSLTVIKAKIACH 89
Query: 261 PAYPRLLQAYMDCQK 217
P+YPRLLQAY+DCQK
Sbjct: 90 PSYPRLLQAYIDCQK 104
>gi|145336056|ref|NP_173752.3| homeobox protein knotted-1-like 6 [Arabidopsis
thaliana]
Length = 329
Score = 108 bits (269), Expect = 8e-022
Identities = 59/75 (78%), Positives = 64/75 (85%), Gaps = 3/75 (4%)
Frame = -1
Query: 435 ALLLS--GDNRVSDVFGSDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACH 262
ALL S G+NRVSDVFGSDEL SVA SA +SS AS+AP IRRND NVSL VIKAKIACH
Sbjct: 34 ALLCSSAGENRVSDVFGSDELLSVAVSA-LSSEAASIAPEIRRNDDNVSLTVIKAKIACH 92
Query: 261 PAYPRLLQAYMDCQK 217
P+YPRLLQAY+DCQK
Sbjct: 93 PSYPRLLQAYIDCQK 107
Score = 59 bits (142), Expect = 4e-007
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -2
Query: 539 MDGMYGFQPTCDYSDKAGMMMLPDNLMFPSDYRTLLCSS 423
MDGMY F DYSDK+ +MM P++LMFPSDY+ LLCSS
Sbjct: 1 MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSS 39
>gi|297850804|ref|XP_002893283.1| hypothetical protein ARALYDRAFT_472599
[Arabidopsis lyrata subsp. lyrata]
Length = 329
Score = 106 bits (262), Expect = 5e-021
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 3/75 (4%)
Frame = -1
Query: 435 ALLLS--GDNRVSDVFGSDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACH 262
ALL S G+N VSDVFGSDEL S AASA +SS AS+AP IRRND NVSL VIK KIACH
Sbjct: 34 ALLCSSAGENHVSDVFGSDELLSAAASA-LSSEAASIAPEIRRNDDNVSLSVIKTKIACH 92
Query: 261 PAYPRLLQAYMDCQK 217
P+YPRLLQAY+DCQK
Sbjct: 93 PSYPRLLQAYIDCQK 107
Score = 59 bits (142), Expect = 4e-007
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -2
Query: 539 MDGMYGFQPTCDYSDKAGMMMLPDNLMFPSDYRTLLCSS 423
MDGMY F DYSDK+ +MM P++LMFPSDY+ LLCSS
Sbjct: 1 MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSS 39
>gi|297838847|ref|XP_002887305.1| hypothetical protein ARALYDRAFT_476175
[Arabidopsis lyrata subsp. lyrata]
Length = 310
Score = 65 bits (156), Expect = 1e-008
Identities = 34/60 (56%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = -1
Query: 393 GSDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACHPAYPRLLQAYMDCQKV 214
G + +F AT S A P IR+ D N SL VIK+KIACHP YPRLLQ Y+DCQKV
Sbjct: 34 GDNRVFGSDELATALSSEA--PPRIRKADDNFSLSVIKSKIACHPLYPRLLQTYIDCQKV 91
>gi|984046|emb|CAA57122.1| ATK1 [Arabidopsis thaliana]
Length = 311
Score = 59 bits (140), Expect = 7e-007
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = -1
Query: 390 SDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACHPAYPRLLQAYMDCQKV 214
+ LF AT S + + P IR+ + N SL VIK+KIA HP YPRLLQ Y+DCQKV
Sbjct: 36 NQRLFGSDELATALS--SELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKV 92
>gi|25386225|pir||A96729 homeotic protein (ATK1), 26548-32058 [imported] -
Arabidopsis thaliana
Length = 311
Score = 59 bits (140), Expect = 7e-007
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = -1
Query: 390 SDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACHPAYPRLLQAYMDCQKV 214
+ LF AT S + + P IR+ + N SL VIK+KIA HP YPRLLQ Y+DCQKV
Sbjct: 36 NQRLFGSDELATALS--SELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKV 92
>gi|42563111|ref|NP_177208.2| homeobox protein knotted-1-like 2 [Arabidopsis
thaliana]
Length = 310
Score = 59 bits (140), Expect = 7e-007
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = -1
Query: 390 SDELFSVAASATMSSGVASMAPGIRRNDGNVSLGVIKAKIACHPAYPRLLQAYMDCQKV 214
+ LF AT S + + P IR+ + N SL VIK+KIA HP YPRLLQ Y+DCQKV
Sbjct: 36 NQRLFGSDELATALS--SELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKV 92
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,178,980,611,991
Number of Sequences: 15229318
Number of Extensions: 1178980611991
Number of Successful Extensions: 310660920
Number of sequences better than 0.0: 0
|
