BLASTX 7.6.2
Query= UN81244 /QuerySize=710
(709 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculu... 55 3e-007
sp|Q9U299|XRN2_CAEEL 5'-3' exoribonuclease 2 homolog OS=Caenorha... 55 5e-007
sp|A3PY75|IF2_MYCSJ Translation initiation factor IF-2 OS=Mycoba... 52 4e-006
sp|A1UER8|IF2_MYCSK Translation initiation factor IF-2 OS=Mycoba... 52 4e-006
sp|Q1BA94|IF2_MYCSS Translation initiation factor IF-2 OS=Mycoba... 52 4e-006
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1
SV=2
Length = 1380
Score = 55 bits (132), Expect = 3e-007
Identities = 39/93 (41%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +1
Query: 214 GFGRGRGGNNREGSGGNNRYSGGYSKPSEERDVTKPSYERRGGGGGGGYGGPPRGGRRGE 393
G+G G GG GSGG Y GG E ++ SY GGGGGGY G +GG R
Sbjct: 1277 GYGGGGGGGYGGGSGG---YGGGGYGGGEGYSISPNSYRGNYGGGGGGYRGGSQGGYRNN 1333
Query: 394 AGEGERPRRAFERRSGTG-RG-GDFKRRNTRAG 486
G R R SG G RG G F+RR G
Sbjct: 1334 FGGDYRGSSGDYRGSGGGYRGSGGFQRRGYGGG 1366
>sp|Q9U299|XRN2_CAEEL 5'-3' exoribonuclease 2 homolog OS=Caenorhabditis elegans
GN=xrn-2 PE=1 SV=2
Length = 975
Score = 55 bits (130), Expect = 5e-007
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +1
Query: 205 RR*GFGRGRGGNNREGSGGN--NRYSGGYSKPSEERDVTKPSYERRGGGGGGGYGGPPRG 378
RR G G G G N+R+ G N R GG + +++ + Y+ GGG GGGYGG G
Sbjct: 867 RRGGGGGGGGYNDRQDFGRNYGGRDGGGPQRYHDQQQQRQGGYQ--GGGYGGGYGGGGGG 924
Query: 379 GRRGEAGEGERPRRAFERRSGTGRGG 456
G G G +P +RR G G GG
Sbjct: 925 GGGGGGGSYHQPYNQDQRRGGRGGGG 950
>sp|A3PY75|IF2_MYCSJ Translation initiation factor IF-2 OS=Mycobacterium sp.
(strain JLS) GN=infB PE=3 SV=1
Length = 920
Score = 52 bits (122), Expect = 4e-006
Identities = 37/98 (37%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = +1
Query: 208 R*GFGRGRGGNNREGSGGNNRYSGGYSKPSEERDVTKPSYERRGGGGGGGYGGPPRGGRR 387
R G GR G R G GG GG +P +Y G GGGGG GG GG R
Sbjct: 210 RPGAPAGRPGGPRPGPGGRGP-GGGGGRPGGPGGGGGGNYRGGGAGGGGGAGGAAAGGFR 268
Query: 388 GEAGEGERPRR------AFERRSGTGRGGDFKRRNTRA 483
G G G RP + AF R G + G +R RA
Sbjct: 269 GRPGGGGRPGQRGGAAGAFGRPGGAPKRGRKSKRAKRA 306
>sp|A1UER8|IF2_MYCSK Translation initiation factor IF-2 OS=Mycobacterium sp.
(strain KMS) GN=infB PE=3 SV=1
Length = 920
Score = 52 bits (122), Expect = 4e-006
Identities = 37/98 (37%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = +1
Query: 208 R*GFGRGRGGNNREGSGGNNRYSGGYSKPSEERDVTKPSYERRGGGGGGGYGGPPRGGRR 387
R G GR G R G GG GG +P +Y G GGGGG GG GG R
Sbjct: 210 RPGAPAGRPGGPRPGPGGRGP-GGGGGRPGGPGGGGGGNYRGGGAGGGGGAGGAAAGGFR 268
Query: 388 GEAGEGERPRR------AFERRSGTGRGGDFKRRNTRA 483
G G G RP + AF R G + G +R RA
Sbjct: 269 GRPGGGGRPGQRGGAAGAFGRPGGAPKRGRKSKRAKRA 306
>sp|Q1BA94|IF2_MYCSS Translation initiation factor IF-2 OS=Mycobacterium sp.
(strain MCS) GN=infB PE=3 SV=1
Length = 920
Score = 52 bits (122), Expect = 4e-006
Identities = 37/98 (37%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = +1
Query: 208 R*GFGRGRGGNNREGSGGNNRYSGGYSKPSEERDVTKPSYERRGGGGGGGYGGPPRGGRR 387
R G GR G R G GG GG +P +Y G GGGGG GG GG R
Sbjct: 210 RPGAPAGRPGGPRPGPGGRGP-GGGGGRPGGPGGGGGGNYRGGGAGGGGGAGGAAAGGFR 268
Query: 388 GEAGEGERPRR------AFERRSGTGRGGDFKRRNTRA 483
G G G RP + AF R G + G +R RA
Sbjct: 269 GRPGGGGRPGQRGGAAGAFGRPGGAPKRGRKSKRAKRA 306
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,818,014,972
Number of Sequences: 518415
Number of Extensions: 259818014972
Number of Successful Extensions: 1673700095
Number of sequences better than 0.0: 0
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