BLASTX 7.6.2
Query= UN81244 /QuerySize=710
(709 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G16830.1 | Symbols: | nuclear RNA-binding pro... 124 7e-029
TAIR9_protein||AT4G16830.3 | Symbols: | nuclear RNA-binding pro... 124 7e-029
TAIR9_protein||AT4G16830.2 | Symbols: | nuclear RNA-binding pro... 52 3e-007
TAIR9_protein||AT1G31290.1 | Symbols: | PAZ domain-containing p... 51 5e-007
TAIR9_protein||AT3G22800.1 | Symbols: | leucine-rich repeat fam... 49 2e-006
TAIR9_protein||AT5G46730.1 | Symbols: | glycine-rich protein | ... 48 5e-006
TAIR9_protein||AT1G54215.1 | Symbols: | proline-rich family pro... 47 8e-006
>TAIR9_protein||AT4G16830.1 | Symbols: | nuclear RNA-binding protein (RGGA) |
chr4:9470621-9472308 FORWARD
Length = 356
Score = 124 bits (310), Expect = 7e-029
Identities = 66/102 (64%), Positives = 71/102 (69%), Gaps = 11/102 (10%)
Frame = +1
Query: 208 R*GFGRGRGGNNREGSGGNNRYSGGYSKPSEERDVTKPSYERRGGGG---------GGGY 360
R GF RGRGG NR+ GNN YSGGY+KPS E DV+K SYERRGGGG GGG
Sbjct: 72 RGGFNRGRGGYNRD--DGNNGYSGGYTKPSGEGDVSKSSYERRGGGGAPRGSFRGEGGGP 129
Query: 361 GGPPRGGRRGEAGEGERPRRAFERRSGTGRGGDFKRRNTRAG 486
GG RGG E G+GERPRRAFERRSGTGRG DFKR + G
Sbjct: 130 GGGRRGGFSNEGGDGERPRRAFERRSGTGRGSDFKRDGSGRG 171
>TAIR9_protein||AT4G16830.3 | Symbols: | nuclear RNA-binding protein (RGGA) |
chr4:9470652-9472308 FORWARD
Length = 346
Score = 124 bits (310), Expect = 7e-029
Identities = 66/102 (64%), Positives = 71/102 (69%), Gaps = 11/102 (10%)
Frame = +1
Query: 208 R*GFGRGRGGNNREGSGGNNRYSGGYSKPSEERDVTKPSYERRGGGG---------GGGY 360
R GF RGRGG NR+ GNN YSGGY+KPS E DV+K SYERRGGGG GGG
Sbjct: 62 RGGFNRGRGGYNRD--DGNNGYSGGYTKPSGEGDVSKSSYERRGGGGAPRGSFRGEGGGP 119
Query: 361 GGPPRGGRRGEAGEGERPRRAFERRSGTGRGGDFKRRNTRAG 486
GG RGG E G+GERPRRAFERRSGTGRG DFKR + G
Sbjct: 120 GGGRRGGFSNEGGDGERPRRAFERRSGTGRGSDFKRDGSGRG 161
>TAIR9_protein||AT4G16830.2 | Symbols: | nuclear RNA-binding protein (RGGA) |
chr4:9470979-9472308 FORWARD
Length = 266
Score = 52 bits (123), Expect = 3e-007
Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = +1
Query: 385 RGEA-GEGERPRRAFERRSGTGRGGDFKRRNTRAG 486
RG A G+GERPRRAFERRSGTGRG DFKR + G
Sbjct: 47 RGVAGGDGERPRRAFERRSGTGRGSDFKRDGSGRG 81
>TAIR9_protein||AT1G31290.1 | Symbols: | PAZ domain-containing protein / piwi
domain-containing protein | chr1:11188293-11192317 FORWARD
Length = 1195
Score = 51 bits (121), Expect = 5e-007
Identities = 35/92 (38%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 214 GFGRGRGGNNREGSGGNNRYSG-GYSKPSEERDVTKPSYERRGGGGGGGYGGPPRGGRRG 390
G GRGRGG G G + R G G + + RGGGG G G RG RG
Sbjct: 11 GDGRGRGGGGDRGRGYSGRGDGRGRGGDGDRGYSGRGDGHGRGGGGDRGRGYSGRGDGRG 70
Query: 391 EAGEGERPRRAFERRSGTGRGGDFKRRNTRAG 486
G G+R R R G GRGG R +G
Sbjct: 71 RGGGGDRGRGYSGRGDGHGRGGGGDRGRGYSG 102
>TAIR9_protein||AT3G22800.1 | Symbols: | leucine-rich repeat family protein /
extensin family protein | chr3:8063063-8064475 REVERSE
Length = 471
Score = 49 bits (116), Expect = 2e-006
Identities = 26/63 (41%), Positives = 28/63 (44%)
Frame = -3
Query: 407 SPSPASPRLPPRGGPPYPPPPPPPRLS*EGFVTSLSSEGLLYPPEYRLLPPEPSRLLPPR 228
SP P P PP PP PPPPPPP +V PP Y PP P + PP
Sbjct: 378 SPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPP 437
Query: 227 PRP 219
P P
Sbjct: 438 PSP 440
>TAIR9_protein||AT5G46730.1 | Symbols: | glycine-rich protein |
chr5:18964030-18964902 FORWARD
Length = 291
Score = 48 bits (113), Expect = 5e-006
Identities = 30/83 (36%), Positives = 35/83 (42%), Gaps = 17/83 (20%)
Frame = +1
Query: 214 GFGRGRGGNNREGS--GGNNRYSGGYSKPSEERDVTKPSYERRGGGGGGGYGGPPRGGRR 387
G+G G GG + G GG + GGY GGG GGGYGG GG
Sbjct: 208 GYGGGGGGGSGGGGAYGGGGAHGGGYGS---------------GGGEGGGYGGGAAGGYG 252
Query: 388 GEAGEGERPRRAFERRSGTGRGG 456
G G GE ++ G G GG
Sbjct: 253 GGGGGGEGGGGSYGGEHGGGSGG 275
>TAIR9_protein||AT1G54215.1 | Symbols: | proline-rich family protein |
chr1:20243118-20243627 FORWARD
Length = 170
Score = 47 bits (111), Expect = 8e-006
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 20/93 (21%)
Frame = -3
Query: 410 RSPSPASPRLPPRGGPPYPPPPPPPRLS*EGFVTSLSSEGLLYPPEYRLL---------- 261
+SP P P PP PP PPPPPPP ++S E + PP +
Sbjct: 40 QSPPPPPPPPPPPPPPPPPPPPPPP-------AVNMSVETGIPPPPPPVTDMIKPLSSPP 92
Query: 260 PPEPSRLLPPRPRP---NPQRRHPTDQKGSKLP 171
PP+P P P+P N RRHP + + P
Sbjct: 93 PPQPPPRSQPPPKPPQKNLPRRHPPPPRSPEKP 125
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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