BLASTX 7.6.2
Query= UN81374 /QuerySize=797
(796 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147742768|gb|ABQ50549.1| hypothetical protein [Brassica rapa] 231 8e-059
gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa] 221 1e-055
gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa] 218 7e-055
gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing... 215 6e-054
gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana] 214 2e-053
gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thal... 210 2e-052
gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing... 210 2e-052
gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-contain... 204 1e-050
gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-contai... 198 8e-049
gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-conta... 196 4e-048
gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing... 194 1e-047
gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis... 194 1e-047
gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thal... 191 9e-047
gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pent... 191 9e-047
gi|334182516|ref|NP_172730.3| helicase domain and pentatricopept... 191 9e-047
gi|225189441|emb|CAR70004.1| pentatricopeptide repeat(PPR)-conta... 190 3e-046
gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT... 189 5e-046
gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing... 154 1e-035
gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-cont... 150 3e-034
gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing... 149 5e-034
>gi|147742768|gb|ABQ50549.1| hypothetical protein [Brassica rapa]
Length = 218
Score = 231 bits (589), Expect = 8e-059
Identities = 118/150 (78%), Positives = 131/150 (87%), Gaps = 2/150 (1%)
Frame = +2
Query: 257 PWKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRL 436
P S +G +SSDR S YKE+LR GLV+IKKDDAVALFQSMI SRPLPTV+DFSRL
Sbjct: 63 PRFSGTGTSIGSSSDRNFS--YKEKLRSGLVDIKKDDAVALFQSMIQSRPLPTVVDFSRL 120
Query: 437 FSGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGY 616
FSGIA+TKQYDLVL LCKQMES+G+AH+ Y+LNIMINCFCRRRKLGFAFS GKMLKLGY
Sbjct: 121 FSGIARTKQYDLVLSLCKQMESNGIAHDNYSLNIMINCFCRRRKLGFAFSVFGKMLKLGY 180
Query: 617 EPTTITFSTLINGLCLKGLVSHAVELVDRM 706
EPTT+TFSTLINGLCL+G VS AVELVDR+
Sbjct: 181 EPTTVTFSTLINGLCLEGRVSEAVELVDRI 210
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 221 bits (561), Expect = 1e-055
Identities = 116/169 (68%), Positives = 137/169 (81%), Gaps = 2/169 (1%)
Frame = +2
Query: 284 SSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQ 463
S +SDRKMSS YKERLR GLV+IKKDDAVALFQSM+ SRPLPTVIDF+RLF +A+TKQ
Sbjct: 47 SGLTSDRKMSS-YKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQ 105
Query: 464 YDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFST 643
YDLVL LCKQME G+A+++YTLNIMINCFCRRRKLGFAFSA GK+ KLGYEP T+TF+T
Sbjct: 106 YDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNT 165
Query: 644 LINGLCLKGLVSHAVELVDRMV-EMKLFQISSYLTLLSWSLSPSRVSEA 787
L+NGLCL+G V AVELVD MV + + + T+++ RVSEA
Sbjct: 166 LLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 218 bits (555), Expect = 7e-055
Identities = 112/165 (67%), Positives = 135/165 (81%), Gaps = 3/165 (1%)
Frame = +2
Query: 296 SDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLV 475
SDR +S Y+ERL G+ +IKKDDAV LFQSMI SRPLP++IDFSRLFS +AKTKQY+LV
Sbjct: 43 SDRNLS--YRERLSSGIADIKKDDAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELV 100
Query: 476 LDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLING 655
L LCKQME G+AH+IYTL+I+INCFCRRRKLGFAFS GK+LKLGYEP T+TFSTL+NG
Sbjct: 101 LSLCKQMELQGIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNG 160
Query: 656 LCLKGLVSHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
LCL+G VS AV +VDRMVEMK+ + + TL++ +VSEA
Sbjct: 161 LCLEGRVSEAVVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEA 205
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 637
Score = 215 bits (547), Expect = 6e-054
Identities = 110/143 (76%), Positives = 122/143 (85%), Gaps = 2/143 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
S SDR +S Y+ERLR GLV+IK DDA+ LF+ MI SRPLPTVIDFSRLFS IAKTKQY
Sbjct: 47 SAFSDRNLS--YRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
DLVL LCKQME G+AHN+YTL+IMINCFCR RKL AFSA GK++KLGYEP TITFSTL
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 647 INGLCLKGLVSHAVELVDRMVEM 715
INGLCL+G VS A+ELVDRMVEM
Sbjct: 165 INGLCLEGRVSEALELVDRMVEM 187
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 214 bits (543), Expect = 2e-053
Identities = 108/141 (76%), Positives = 122/141 (86%), Gaps = 2/141 (1%)
Frame = +2
Query: 293 SSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDL 472
++DR +S Y+ERLR GLV+IK DDA+ LF+ MI SRPLPTVIDFSRLFS IAKTKQYDL
Sbjct: 147 ANDRNLS--YRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 204
Query: 473 VLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLIN 652
VL LCKQME G+AHN+YTL+IMINCFCR RKL AFSA GK++KLGYEP TITFSTLIN
Sbjct: 205 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 264
Query: 653 GLCLKGLVSHAVELVDRMVEM 715
GLCL+G VS A+ELVDRMVEM
Sbjct: 265 GLCLEGRVSEALELVDRMVEM 285
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 210 bits (534), Expect = 2e-052
Identities = 106/150 (70%), Positives = 122/150 (81%)
Frame = +2
Query: 266 SLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSG 445
S G V S+ SD K Y+ERLR G+V+IK+DDAV LFQ M SRP P +IDFSRLFS
Sbjct: 22 SCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSV 81
Query: 446 IAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPT 625
+A+TKQYDLVLDLCKQME G+AHN+YTL+IMINC CR RKL AFSA GK++KLGYEP
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPD 141
Query: 626 TITFSTLINGLCLKGLVSHAVELVDRMVEM 715
T+TFSTLINGLCL+G VS A+ELVDRMVEM
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEM 171
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 621
Score = 210 bits (534), Expect = 2e-052
Identities = 106/150 (70%), Positives = 122/150 (81%)
Frame = +2
Query: 266 SLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSG 445
S G V S+ SD K Y+ERLR G+V+IK+DDAV LFQ M SRP P +IDFSRLFS
Sbjct: 22 SCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSV 81
Query: 446 IAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPT 625
+A+TKQYDLVLDLCKQME G+AHN+YTL+IMINC CR RKL AFSA GK++KLGYEP
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPD 141
Query: 626 TITFSTLINGLCLKGLVSHAVELVDRMVEM 715
T+TFSTLINGLCL+G VS A+ELVDRMVEM
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEM 171
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 644
Score = 204 bits (518), Expect = 1e-050
Identities = 102/143 (71%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
ST SDR +S Y+++L GLV IK DDAV LF+ MI SRPLPTVIDF+RLFS IAKTKQY
Sbjct: 47 STFSDRNLS--YRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
+LVL LCKQMES G+AH+IYTL+IMINCFCR RKL +AFS GK++KLGYEP T+ F+TL
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 647 INGLCLKGLVSHAVELVDRMVEM 715
+NGLCL+ VS A+ELVDRMVEM
Sbjct: 165 LNGLCLECRVSEALELVDRMVEM 187
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 618
Score = 198 bits (503), Expect = 8e-049
Identities = 101/168 (60%), Positives = 130/168 (77%), Gaps = 3/168 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
S S+ K+S YKERLR G+V+IK ++A+ LF+SMI SRPLP++IDFS+LFS +A+ K+Y
Sbjct: 28 SCISEAKVS--YKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEY 85
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
DLVL CK+M+ +G+ HN+YT+NIMINCFCR+RKL FAFS G+ LK G+EP TITFSTL
Sbjct: 86 DLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTL 145
Query: 647 INGLCLKGLVSHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
ING CL+G VS AV LVDRMVEMK + + TL++ RV+EA
Sbjct: 146 INGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein
At1g12700 [Arabidopsis thaliana]
Length = 602
Score = 196 bits (497), Expect = 4e-048
Identities = 94/131 (71%), Positives = 112/131 (85%)
Frame = +2
Query: 320 YKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQME 499
++ERLR G+V+IKKDDA+ALFQ MI SRPLP ++DFSR FS IA+TKQ++LVLD CKQ+E
Sbjct: 56 FRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLE 115
Query: 500 SSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLVS 679
+G+AHNIYTLNIMINCFCR K FA+S GK++KLGYEP T TF+TLINGLCL+G VS
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVS 175
Query: 680 HAVELVDRMVE 712
AV LVDRMVE
Sbjct: 176 KAVVLVDRMVE 186
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 619
Score = 194 bits (492), Expect = 1e-047
Identities = 101/168 (60%), Positives = 128/168 (76%), Gaps = 3/168 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
S+ ++ K+S YKERLR G+V+IK +DA+ LF+SMI SRPLPT IDF+RL S +A+TKQY
Sbjct: 29 SSITEAKLS--YKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 86
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
DLVL CK ME +G+ H++YT+ IMINC+CR++KL FAFS G+ KLGYEP TITFSTL
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 647 INGLCLKGLVSHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
+NG CL+G VS AV LVDRMVEMK + + TL++ RVSEA
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 194 bits (492), Expect = 1e-047
Identities = 101/168 (60%), Positives = 128/168 (76%), Gaps = 3/168 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
S+ ++ K+S YKERLR G+V+IK +DA+ LF+SMI SRPLPT IDF+RL S +A+TKQY
Sbjct: 58 SSITEAKLS--YKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 115
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
DLVL CK ME +G+ H++YT+ IMINC+CR++KL FAFS G+ KLGYEP TITFSTL
Sbjct: 116 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 175
Query: 647 INGLCLKGLVSHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
+NG CL+G VS AV LVDRMVEMK + + TL++ RVSEA
Sbjct: 176 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 191 bits (485), Expect = 9e-047
Identities = 97/151 (64%), Positives = 118/151 (78%), Gaps = 3/151 (1%)
Frame = +2
Query: 260 WKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLF 439
+ S D SS S+ ++ERLR G+V+IKKDDA+ALFQ MI SRPLP+++DFSR F
Sbjct: 29 FSSCERDFSSISNGNVC---FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFF 85
Query: 440 SGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYE 619
S IA+TKQ++LVLD CKQ+E +G+AHNIYTLNIMINCFCR K FA+S GK++KLGYE
Sbjct: 86 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 145
Query: 620 PTTITFSTLINGLCLKGLVSHAVELVDRMVE 712
P T TF+TLI GL L+G VS AV LVDRMVE
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 176
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 191 bits (485), Expect = 9e-047
Identities = 97/151 (64%), Positives = 118/151 (78%), Gaps = 3/151 (1%)
Frame = +2
Query: 260 WKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLF 439
+ S D SS S+ ++ERLR G+V+IKKDDA+ALFQ MI SRPLP+++DFSR F
Sbjct: 39 FSSCERDFSSISNGNVC---FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFF 95
Query: 440 SGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYE 619
S IA+TKQ++LVLD CKQ+E +G+AHNIYTLNIMINCFCR K FA+S GK++KLGYE
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 620 PTTITFSTLINGLCLKGLVSHAVELVDRMVE 712
P T TF+TLI GL L+G VS AV LVDRMVE
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 735
Score = 191 bits (485), Expect = 9e-047
Identities = 97/151 (64%), Positives = 118/151 (78%), Gaps = 3/151 (1%)
Frame = +2
Query: 260 WKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLF 439
+ S D SS S+ ++ERLR G+V+IKKDDA+ALFQ MI SRPLP+++DFSR F
Sbjct: 39 FSSCERDFSSISNGNVC---FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFF 95
Query: 440 SGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYE 619
S IA+TKQ++LVLD CKQ+E +G+AHNIYTLNIMINCFCR K FA+S GK++KLGYE
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 620 PTTITFSTLINGLCLKGLVSHAVELVDRMVE 712
P T TF+TLI GL L+G VS AV LVDRMVE
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
>gi|225189441|emb|CAR70004.1| pentatricopeptide repeat(PPR)-containing protein
At1g12700 [Arabidopsis thaliana]
Length = 278
Score = 190 bits (481), Expect = 3e-046
Identities = 97/151 (64%), Positives = 118/151 (78%), Gaps = 3/151 (1%)
Frame = +2
Query: 260 WKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLF 439
+ S D SS S+ ++ERLR G+V+IKKDDA+ALFQ MI SRPLP+++DFSR F
Sbjct: 39 FSSCERDFSSISNGNVC---FRERLRIGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFF 95
Query: 440 SGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYE 619
S IA+TKQ++LVLD CKQ+E +G+AHNIYTLNIMINCFCR K FA+S GK++KLGYE
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 620 PTTITFSTLINGLCLKGLVSHAVELVDRMVE 712
P T TF+TLI GL L+G VS AV LVDRMVE
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420
[Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 189 bits (479), Expect = 5e-046
Identities = 91/131 (69%), Positives = 109/131 (83%)
Frame = +2
Query: 320 YKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQME 499
Y ERLR G+V+IK+DDA+ LFQ MI SRPLP+++DFSR FSG+A TKQ++LVLD CK+ME
Sbjct: 33 YGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKME 92
Query: 500 SSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLVS 679
+G+AHNIYTLNIMINCFCR K FA+S GK++KLGYEP T TF+TLINGLCL+ VS
Sbjct: 93 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVS 152
Query: 680 HAVELVDRMVE 712
AV LV RMVE
Sbjct: 153 EAVVLVARMVE 163
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 577
Score = 154 bits (389), Expect = 1e-035
Identities = 71/135 (52%), Positives = 101/135 (74%)
Frame = +2
Query: 311 SSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCK 490
S Y+E LR GL ++K DDA+ LF M+ SRPLP++ +F++L S IAK K++DLV+ L +
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 491 QMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKG 670
+M+ G++HN+YT NI+INCFCRR ++ A + GKM+KLGYEP+ +T S+L+NG C
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 671 LVSHAVELVDRMVEM 715
+S AV LVD+MVEM
Sbjct: 170 RISDAVALVDQMVEM 184
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana]
Length = 630
Score = 150 bits (377), Expect = 3e-034
Identities = 73/138 (52%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
Frame = +2
Query: 305 KMSSRYKERL-RGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLD 481
K S Y+E+L R GL +K DDAVALF M+ SRP P++I+FS+L S IAK ++D+V+
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 102
Query: 482 LCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLC 661
L +QM++ G+ HN YT +I++NCFCRR +L A + GKM+KLGYEP +T S+L+NG C
Sbjct: 103 LGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 162
Query: 662 LKGLVSHAVELVDRMVEM 715
+S AV LVD+MVEM
Sbjct: 163 HGKRISEAVALVDQMVEM 180
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 614
Score = 149 bits (375), Expect = 5e-034
Identities = 75/158 (47%), Positives = 109/158 (68%), Gaps = 2/158 (1%)
Frame = +2
Query: 320 YKERL-RGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQM 496
Y+E+L R L+++K D+AV LF M+ SRP P++++FS+L S IAK K++DLV+ ++M
Sbjct: 32 YREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM 91
Query: 497 ESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLV 676
E GV+HN+YT NIMINC CRR +L FA + GKM+KLGY P+ +T ++L+NG C +
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 677 SHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
S AV LVD+MVEM ++ TL+ ++ SEA
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,207,887,359,536
Number of Sequences: 15229318
Number of Extensions: 1207887359536
Number of Successful Extensions: 328079447
Number of sequences better than 0.0: 0
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