BLASTX 7.6.2
Query= UN81374 /QuerySize=797
(796 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G12300.1 | Symbols: | pentatricopeptide (PPR)... 215 3e-056
TAIR9_protein||AT1G12620.1 | Symbols: | pentatricopeptide (PPR)... 210 8e-055
TAIR9_protein||AT1G12775.1 | Symbols: | LOCATED IN: mitochondri... 204 6e-053
TAIR9_protein||AT3G22470.1 | Symbols: | pentatricopeptide (PPR)... 194 6e-050
TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-contain... 191 4e-049
TAIR9_protein||AT1G63400.1 | Symbols: | pentatricopeptide (PPR)... 154 5e-038
TAIR9_protein||AT1G63080.1 | Symbols: | pentatricopeptide (PPR)... 149 2e-036
TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)... 149 3e-036
TAIR9_protein||AT1G62910.1 | Symbols: | pentatricopeptide (PPR)... 147 1e-035
TAIR9_protein||AT1G62670.1 | Symbols: | pentatricopeptide (PPR)... 146 1e-035
TAIR9_protein||AT1G63130.1 | Symbols: | pentatricopeptide (PPR)... 141 6e-034
TAIR9_protein||AT1G62680.1 | Symbols: | LOCATED IN: chloroplast... 141 8e-034
TAIR9_protein||AT1G63150.1 | Symbols: | pentatricopeptide (PPR)... 140 1e-033
TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)... 138 7e-033
TAIR9_protein||AT5G41170.1 | Symbols: | pentatricopeptide (PPR)... 137 1e-032
TAIR9_protein||AT5G16640.1 | Symbols: | pentatricopeptide (PPR)... 137 1e-032
TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological... 136 2e-032
TAIR9_protein||AT1G06580.1 | Symbols: | pentatricopeptide (PPR)... 132 3e-031
TAIR9_protein||AT1G64580.1 | Symbols: | pentatricopeptide (PPR)... 129 3e-030
>TAIR9_protein||AT1G12300.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:4184163-4186076 REVERSE
Length = 638
Score = 215 bits (547), Expect = 3e-056
Identities = 110/143 (76%), Positives = 122/143 (85%), Gaps = 2/143 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
S SDR +S Y+ERLR GLV+IK DDA+ LF+ MI SRPLPTVIDFSRLFS IAKTKQY
Sbjct: 47 SAFSDRNLS--YRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
DLVL LCKQME G+AHN+YTL+IMINCFCR RKL AFSA GK++KLGYEP TITFSTL
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 647 INGLCLKGLVSHAVELVDRMVEM 715
INGLCL+G VS A+ELVDRMVEM
Sbjct: 165 INGLCLEGRVSEALELVDRMVEM 187
>TAIR9_protein||AT1G12620.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:4294883-4296748 REVERSE
Length = 622
Score = 210 bits (534), Expect = 8e-055
Identities = 106/150 (70%), Positives = 122/150 (81%)
Frame = +2
Query: 266 SLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSG 445
S G V S+ SD K Y+ERLR G+V+IK+DDAV LFQ M SRP P +IDFSRLFS
Sbjct: 22 SCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSV 81
Query: 446 IAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPT 625
+A+TKQYDLVLDLCKQME G+AHN+YTL+IMINC CR RKL AFSA GK++KLGYEP
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPD 141
Query: 626 TITFSTLINGLCLKGLVSHAVELVDRMVEM 715
T+TFSTLINGLCL+G VS A+ELVDRMVEM
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEM 171
>TAIR9_protein||AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED
IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, D bilateral stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G12300.1);
Has 27792 Blast hits to 6269 proteins in 197 species: Archae - 2;
Bacteria - 23; Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). | chr1:4353906-4355840
FORWARD
Length = 645
Score = 204 bits (518), Expect = 6e-053
Identities = 102/143 (71%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
ST SDR +S Y+++L GLV IK DDAV LF+ MI SRPLPTVIDF+RLFS IAKTKQY
Sbjct: 47 STFSDRNLS--YRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
+LVL LCKQMES G+AH+IYTL+IMINCFCR RKL +AFS GK++KLGYEP T+ F+TL
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 647 INGLCLKGLVSHAVELVDRMVEM 715
+NGLCL+ VS A+ELVDRMVEM
Sbjct: 165 LNGLCLECRVSEALELVDRMVEM 187
>TAIR9_protein||AT3G22470.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:7966066-7967925 REVERSE
Length = 620
Score = 194 bits (492), Expect = 6e-050
Identities = 101/168 (60%), Positives = 128/168 (76%), Gaps = 3/168 (1%)
Frame = +2
Query: 287 STSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQY 466
S+ ++ K+S YKERLR G+V+IK +DA+ LF+SMI SRPLPT IDF+RL S +A+TKQY
Sbjct: 29 SSITEAKLS--YKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 86
Query: 467 DLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTL 646
DLVL CK ME +G+ H++YT+ IMINC+CR++KL FAFS G+ KLGYEP TITFSTL
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 647 INGLCLKGLVSHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
+NG CL+G VS AV LVDRMVEMK + + TL++ RVSEA
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
>TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 829
Score = 191 bits (485), Expect = 4e-049
Identities = 97/151 (64%), Positives = 118/151 (78%), Gaps = 3/151 (1%)
Frame = +2
Query: 260 WKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLF 439
+ S D SS S+ ++ERLR G+V+IKKDDA+ALFQ MI SRPLP+++DFSR F
Sbjct: 29 FSSCERDFSSISNGNVC---FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFF 85
Query: 440 SGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYE 619
S IA+TKQ++LVLD CKQ+E +G+AHNIYTLNIMINCFCR K FA+S GK++KLGYE
Sbjct: 86 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 145
Query: 620 PTTITFSTLINGLCLKGLVSHAVELVDRMVE 712
P T TF+TLI GL L+G VS AV LVDRMVE
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 176
>TAIR9_protein||AT1G63400.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23507320-23509053 FORWARD
Length = 578
Score = 154 bits (389), Expect = 5e-038
Identities = 71/135 (52%), Positives = 101/135 (74%)
Frame = +2
Query: 311 SSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCK 490
S Y+E LR GL ++K DDA+ LF M+ SRPLP++ +F++L S IAK K++DLV+ L +
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 491 QMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKG 670
+M+ G++HN+YT NI+INCFCRR ++ A + GKM+KLGYEP+ +T S+L+NG C
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 671 LVSHAVELVDRMVEM 715
+S AV LVD+MVEM
Sbjct: 170 RISDAVALVDQMVEM 184
>TAIR9_protein||AT1G63080.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23388884-23390728 REVERSE
Length = 615
Score = 149 bits (375), Expect = 2e-036
Identities = 75/158 (47%), Positives = 109/158 (68%), Gaps = 2/158 (1%)
Frame = +2
Query: 320 YKERL-RGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQM 496
Y+E+L R L+++K D+AV LF M+ SRP P++++FS+L S IAK K++DLV+ ++M
Sbjct: 32 YREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM 91
Query: 497 ESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLV 676
E GV+HN+YT NIMINC CRR +L FA + GKM+KLGY P+ +T ++L+NG C +
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 677 SHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
S AV LVD+MVEM ++ TL+ ++ SEA
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
>TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23177294-23179198 REVERSE
Length = 635
Score = 149 bits (374), Expect = 3e-036
Identities = 68/135 (50%), Positives = 99/135 (73%)
Frame = +2
Query: 311 SSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCK 490
S Y+E LR GL ++K DDA+ LF M+ SRPLP++++F++L S IAK K++D+V+ L +
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 491 QMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKG 670
+M+ + H +YT NI+INCFCRR ++ A + GKM+KLGYEP+ +T S+L+NG C
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 671 LVSHAVELVDRMVEM 715
+S AV LVD+MVEM
Sbjct: 170 RISDAVALVDQMVEM 184
>TAIR9_protein||AT1G62910.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23299060-23303162 FORWARD
Length = 1134
Score = 147 bits (369), Expect = 1e-035
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2
Query: 320 YKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQME 499
Y+E LR GL +I+ DDA+ LF M SRP P++I+FS+L S IAK ++DLV+ ++ME
Sbjct: 651 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 710
Query: 500 SSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLVS 679
G++HN+YT NI+INCFCR +L A + GKM+KLGYEP +T ++L+NG C +S
Sbjct: 711 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 770
Query: 680 HAVELVDRMVEM 715
AV LVD+MVEM
Sbjct: 771 DAVALVDQMVEM 782
Score = 140 bits (352), Expect = 1e-033
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
Frame = +2
Query: 311 SSRYKERLRGGLVN-IKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLC 487
S Y+E LR L + IK DDAV LF M+ SRP P++++F++L S +AK +++LV+ L
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 488 KQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLK 667
+QM++ G++H++YT +I INCFCRR +L A + KM+KLGYEP +T S+L+NG C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 668 GLVSHAVELVDRMVEM 715
+S AV LVD+MVEM
Sbjct: 167 KRISDAVALVDQMVEM 182
>TAIR9_protein||AT1G62670.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23204773-23206665 REVERSE
Length = 631
Score = 146 bits (368), Expect = 1e-035
Identities = 71/135 (52%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Frame = +2
Query: 305 KMSSRYKERL-RGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLD 481
K S Y+E+L R GL +K DDAVALF M+ SRP P++I+FS+L S IAK ++D+V+
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 102
Query: 482 LCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLC 661
L +QM++ G+ HN YT +I+INCFCRR +L A + GKM+KLGYEP +T S+L+NG C
Sbjct: 103 LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 162
Query: 662 LKGLVSHAVELVDRM 706
+S AV LVD+M
Sbjct: 163 HSKRISEAVALVDQM 177
>TAIR9_protein||AT1G63130.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23412854-23414746 FORWARD
Length = 631
Score = 141 bits (354), Expect = 6e-034
Identities = 71/150 (47%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
Frame = +2
Query: 344 LVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQMESSGVAHNI 523
L ++K DDAV LF M+ SRP P++++FS+L S IAK ++DLV+ L +QM++ G++HN+
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 524 YTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLVSHAVELVDR 703
YT +I+INCFCRR +L A + KM+KLGYEP +T ++L+NG C +S AV LV +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 704 MVEMKLFQISSYL--TLLSWSLSPSRVSEA 787
MVEM +Q S+ TL+ +R SEA
Sbjct: 177 MVEMG-YQPDSFTFNTLIHGLFRHNRASEA 205
>TAIR9_protein||AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT1G63130.1); Has 26421 Blast hits to
6237 proteins in 192 species: Archae - 5; Bacteria - 22; Metazoa - 845;
Fungi - 755; Plants - 23373; Viruses - 0; Other Eukaryotes - 1421
(source: NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 549
Score = 141 bits (353), Expect = 8e-034
Identities = 77/177 (43%), Positives = 109/177 (61%), Gaps = 8/177 (4%)
Frame = +2
Query: 260 WKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLF 439
W S VS ++S K RLR +IK +DA+ LF M+ SRP P+++DF+RL
Sbjct: 40 WVRASSSVSGGDLRERLS---KTRLR----DIKLNDAIDLFSDMVKSRPFPSIVDFNRLL 92
Query: 440 SGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYE 619
S I K K+YD+V+ L K+ME G+ +++YT NI+INCFC ++ A S GKMLKLGYE
Sbjct: 93 SAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYE 152
Query: 620 PTTITFSTLINGLCLKGLVSHAVELVDRMVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
P +T +L+NG C + VS AV LVD+MVE+ I +Y ++ RV++A
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
>TAIR9_protein||AT1G63150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23419399-23421288 FORWARD
Length = 630
Score = 140 bits (352), Expect = 1e-033
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
Frame = +2
Query: 311 SSRYKERLRGGLVN-IKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLC 487
S Y+E LR L + IK DDAV LF M+ SRP P++++F++L S +AK +++LV+ L
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 488 KQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLK 667
+QM++ G++H++YT +I INCFCRR +L A + KM+KLGYEP +T S+L+NG C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 668 GLVSHAVELVDRMVEM 715
+S AV LVD+MVEM
Sbjct: 167 KRISDAVALVDQMVEM 182
>TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23385324-23387167 REVERSE
Length = 591
Score = 138 bits (345), Expect = 7e-033
Identities = 67/149 (44%), Positives = 101/149 (67%), Gaps = 1/149 (0%)
Frame = +2
Query: 344 LVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQMESSGVAHNI 523
L ++K DDA+ LF M+ SRP P++++FS+L S IAK ++DLV+ L +QM++ G++HN+
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 110
Query: 524 YTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLVSHAVELVDR 703
YT +I IN FCRR +L A + GKM+KLGY P+ +T ++L+NG C +S AV LVD+
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 704 MVEMKLF-QISSYLTLLSWSLSPSRVSEA 787
MVEM ++ TL+ ++ SEA
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEA 199
>TAIR9_protein||AT5G41170.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:16478860-16480443 REVERSE
Length = 528
Score = 137 bits (343), Expect = 1e-032
Identities = 61/132 (46%), Positives = 99/132 (75%)
Frame = +2
Query: 320 YKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQME 499
Y+E LR GL +++ ++A+ LF M+ SRPLP++IDF++L + IAK K++D+V++LC ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 500 SSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLVS 679
GV+H++YT N+++NCFC+ + A S GKM+KLG+EP +TF++LING CL +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 680 HAVELVDRMVEM 715
A+ +V++MVEM
Sbjct: 160 EAMSMVNQMVEM 171
>TAIR9_protein||AT5G16640.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:5461031-5462545 FORWARD
Length = 505
Score = 137 bits (343), Expect = 1e-032
Identities = 72/162 (44%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Frame = +2
Query: 239 YSYNSFPWKSLSGDVSSTSSDRKM---SSRYKERLRGGLVNIKKDDAVALFQSMIMSRPL 409
YS NS S S + R+ S Y+E LR G+ +K DD++ LF M+ RPL
Sbjct: 19 YSGNSGTSPSSSFSICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPL 78
Query: 410 PTVIDFSRLFSGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSA 589
P++ DFSRL S I+K K+YD+V+ L +QM+ G+ HN+ T NI++NCFCR +L A S
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 590 TGKMLKLGYEPTTITFSTLINGLCLKGLVSHAVELVDRMVEM 715
GKM+KLG+EP+ +TF +L+NG C V A+ + D+MV M
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
>TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1);
Has 29147 Blast hits to 6292 proteins in 192 species: Archae - 8;
Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants - 25291; Viruses -
0; Other Eukaryotes - 1710 (source: NCBI BLink). |
chr1:23306534-23308423 FORWARD
Length = 630
Score = 136 bits (342), Expect = 2e-032
Identities = 64/134 (47%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
Frame = +2
Query: 320 YKERL-RGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQM 496
Y+E+L R L+++K DDAV LF M+ SRPLP++++F++L S IAK ++DLV+ L ++M
Sbjct: 47 YREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 106
Query: 497 ESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGLV 676
++ +++++Y+ NI+INCFCRR +L A + GKM+KLGYEP +T S+L+NG C +
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 677 SHAVELVDRMVEMK 718
S AV LVD+M M+
Sbjct: 167 SEAVALVDQMFVME 180
>TAIR9_protein||AT1G06580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:2014440-2015942 REVERSE
Length = 501
Score = 132 bits (331), Expect = 3e-031
Identities = 61/132 (46%), Positives = 90/132 (68%)
Frame = +2
Query: 314 SRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRLFSGIAKTKQYDLVLDLCKQ 493
S Y+ERLR GL +IK +DA+ LF M S PLP+++DFSRL IAK +Y+ V+ L +
Sbjct: 45 SDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRH 104
Query: 494 MESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGYEPTTITFSTLINGLCLKGL 673
+E G++H++Y+ +I+CFCR +L A S GKM+KLG+EP+ +TF +L+NG C
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164
Query: 674 VSHAVELVDRMV 709
A+ LVD++V
Sbjct: 165 FYEAMSLVDQIV 176
>TAIR9_protein||AT1G64580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23985078-23988740 REVERSE
Length = 1053
Score = 129 bits (322), Expect = 3e-030
Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 4/150 (2%)
Frame = +2
Query: 257 PWKSLSGDVSSTSSDRKMSSRYKERLRGGLVNIKKDDAVALFQSMIMSRPLPTVIDFSRL 436
P SLS S S Y+ERLR L IK DDA +LF M+ SRP+P+++DF+R+
Sbjct: 559 PETSLSRSFSGASHHH----HYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRV 614
Query: 437 FSGIAKTKQYDLVLDLCKQMESSGVAHNIYTLNIMINCFCRRRKLGFAFSATGKMLKLGY 616
+ IAK ++D+V+ L +ME+ G++H++Y+ I+I+CFCR +L A + GKM+KLG+
Sbjct: 615 LTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF 674
Query: 617 EPTTITFSTLINGLCLKGLVSHAVELVDRM 706
P+ +T +L+NG C AV LVD M
Sbjct: 675 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 704
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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