BLASTX 7.6.2
Query= UN81402 /QuerySize=736
(735 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9MTH3|Q9MTH3_SINAL Sigma factor 2 OS=Sinapis alba GN=sig2 PE... 334 9e-090
tr|O22056|O22056_ARATH At1g08540 OS=Arabidopsis thaliana GN=SIG1... 292 4e-077
tr|O22455|O22455_ARATH Sigma factor 2 OS=Arabidopsis thaliana GN... 292 4e-077
tr|Q8GWC1|Q8GWC1_ARATH Putative plastid RNA polymerase sigma-sub... 289 3e-076
tr|B9SDA3|B9SDA3_RICCO RNA polymerase sigma factor rpoD1, putati... 157 1e-036
tr|B9I6F1|B9I6F1_POPTR Predicted protein OS=Populus trichocarpa ... 147 1e-033
tr|B9IPZ1|B9IPZ1_POPTR Predicted protein OS=Populus trichocarpa ... 128 6e-028
tr|Q710C3|Q710C3_SPIOL Sigma factor OS=Spinacia oleracea GN=sig2... 92 4e-017
>tr|Q9MTH3|Q9MTH3_SINAL Sigma factor 2 OS=Sinapis alba GN=sig2 PE=2 SV=1
Length = 575
Score = 334 bits (854), Expect = 9e-090
Identities = 168/193 (87%), Positives = 181/193 (93%), Gaps = 1/193 (0%)
Frame = +1
Query: 97 MSSCLLPNFKCQPDSFSIHFRTSYPVSKHNKSSVYFQPQCAVSTSPPLLTSTLDVSKLRL 276
MSSCLLPNFKCQPDSFS+HFRTSY VSKH+K S +FQPQCAVSTSPPLLTSTLDV+KLRL
Sbjct: 1 MSSCLLPNFKCQPDSFSVHFRTSYSVSKHSKGSAFFQPQCAVSTSPPLLTSTLDVAKLRL 60
Query: 277 PSFDTDSDSRISDRPWSYTGTTGLSTEAKYLEALASETLLTSDEAVVAAAVAEALALARA 456
PSFDTDSDSRISDRPW+YT T G STEAKYLEALASETLLTSDEAVVAAA AEA+ALARA
Sbjct: 61 PSFDTDSDSRISDRPWTYTRTIGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARA 120
Query: 457 ALKVAKDATLFKDTHNSKLSVSSTPDKRSKWDQFTEKERAGILGHLPVSDTGVVSDRVTA 636
ALKVAKDATLF ++HN+KLSVSS DKRSKWDQFTEKERAGILGHL VSDTGVVSDR+TA
Sbjct: 121 ALKVAKDATLFGNSHNTKLSVSSAADKRSKWDQFTEKERAGILGHLAVSDTGVVSDRITA 180
Query: 637 P-ALKCNKESSDD 672
P +L+CNKE+SDD
Sbjct: 181 PGSLECNKEASDD 193
>tr|O22056|O22056_ARATH At1g08540 OS=Arabidopsis thaliana GN=SIG1 PE=2 SV=2
Length = 572
Score = 292 bits (745), Expect = 4e-077
Identities = 151/192 (78%), Positives = 164/192 (85%), Gaps = 2/192 (1%)
Frame = +1
Query: 97 MSSCLLPNFKCQPDSFSIHFRTSYPVSKHNKSSVYFQPQCAVSTSPPLLTSTLDVSKLRL 276
MSSCLLP FKC PDSFSIHFRTS+ KHNK SV+FQPQCAVSTSP LLTS LDV+KLRL
Sbjct: 1 MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPALLTSMLDVAKLRL 60
Query: 277 PSFDTDSDSRISDRPWSYTGTTGLSTEAKYLEALASETLLTSDEAVVAAAVAEALALARA 456
PSFDTDSDS ISDR W+YT G STEAKYLEALASETLLTSDEAVV AA AEA+ALARA
Sbjct: 61 PSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALARA 120
Query: 457 ALKVAKDATLFKDTHNSKLSVSSTPDKRSKWDQFTEKERAGILGHLPVSDTGVVSDRVTA 636
A+KVAKDATLFK+++N+ L SST DKRSKWDQFTEKERAGILGHL VSD G+VSD++TA
Sbjct: 121 AVKVAKDATLFKNSNNTNLLTSSTADKRSKWDQFTEKERAGILGHLAVSDNGIVSDKITA 180
Query: 637 PALKCNKESSDD 672
A NKES D
Sbjct: 181 SA--SNKESIGD 190
>tr|O22455|O22455_ARATH Sigma factor 2 OS=Arabidopsis thaliana GN=SIG2 PE=2
SV=1
Length = 574
Score = 292 bits (745), Expect = 4e-077
Identities = 151/192 (78%), Positives = 164/192 (85%), Gaps = 2/192 (1%)
Frame = +1
Query: 97 MSSCLLPNFKCQPDSFSIHFRTSYPVSKHNKSSVYFQPQCAVSTSPPLLTSTLDVSKLRL 276
MSSCLLP FKC PDSFSIHFRTS+ KHNK SV+FQPQCAVSTSP LLTS LDV+KLRL
Sbjct: 1 MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPALLTSMLDVAKLRL 60
Query: 277 PSFDTDSDSRISDRPWSYTGTTGLSTEAKYLEALASETLLTSDEAVVAAAVAEALALARA 456
PSFDTDSDS ISDR W+YT G STEAKYLEALASETLLTSDEAVV AA AEA+ALARA
Sbjct: 61 PSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALARA 120
Query: 457 ALKVAKDATLFKDTHNSKLSVSSTPDKRSKWDQFTEKERAGILGHLPVSDTGVVSDRVTA 636
A+KVAKDATLFK+++N+ L SST DKRSKWDQFTEKERAGILGHL VSD G+VSD++TA
Sbjct: 121 AVKVAKDATLFKNSNNTNLLTSSTADKRSKWDQFTEKERAGILGHLAVSDNGIVSDKITA 180
Query: 637 PALKCNKESSDD 672
A NKES D
Sbjct: 181 SA--SNKESIGD 190
>tr|Q8GWC1|Q8GWC1_ARATH Putative plastid RNA polymerase sigma-subunit SIG1
OS=Arabidopsis thaliana GN=At1g08540/F22O13_2 PE=2 SV=1
Length = 572
Score = 289 bits (737), Expect = 3e-076
Identities = 150/192 (78%), Positives = 163/192 (84%), Gaps = 2/192 (1%)
Frame = +1
Query: 97 MSSCLLPNFKCQPDSFSIHFRTSYPVSKHNKSSVYFQPQCAVSTSPPLLTSTLDVSKLRL 276
MSSCLLP FKC PDSFSIHFRTS+ KHNK SV+FQPQCAVSTSP LLTS LDV+KLRL
Sbjct: 1 MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPALLTSMLDVAKLRL 60
Query: 277 PSFDTDSDSRISDRPWSYTGTTGLSTEAKYLEALASETLLTSDEAVVAAAVAEALALARA 456
PSFDTDSDS ISDR W+YT G STEAKYLEALASETLLTSDEAVV AA AEA+ALARA
Sbjct: 61 PSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALARA 120
Query: 457 ALKVAKDATLFKDTHNSKLSVSSTPDKRSKWDQFTEKERAGILGHLPVSDTGVVSDRVTA 636
A+KVAKDATLFK+++ + L SST DKRSKWDQFTEKERAGILGHL VSD G+VSD++TA
Sbjct: 121 AVKVAKDATLFKNSNYTNLLTSSTADKRSKWDQFTEKERAGILGHLAVSDNGIVSDKITA 180
Query: 637 PALKCNKESSDD 672
A NKES D
Sbjct: 181 SA--SNKESIGD 190
>tr|B9SDA3|B9SDA3_RICCO RNA polymerase sigma factor rpoD1, putative OS=Ricinus
communis GN=RCOM_1515490 PE=4 SV=1
Length = 569
Score = 157 bits (396), Expect = 1e-036
Identities = 93/184 (50%), Positives = 117/184 (63%), Gaps = 22/184 (11%)
Frame = +1
Query: 97 MSSCLLPNFKCQPDSFSIHFRTSY------PVSKHNKSSVYFQPQCAVS-TSPPLLTSTL 255
M SCLLP FKCQPD+FSIHFR +Y S ++ +Y++ QC +S TSP T+ L
Sbjct: 1 MMSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAVL 60
Query: 256 DVSKLRLPSFDTDSDSRISDRPWSYTGTTGLSTEAKYLEALASETLLTSDEAVVAAAVAE 435
D+ KLRLPSF+ SDS + PW+Y A + LA+ETL+TSDEAV+AAA AE
Sbjct: 61 DLEKLRLPSFEAPSDSIAPNSPWTY---------ATFGSTLATETLITSDEAVIAAAAAE 111
Query: 436 ALALARAALKVAKDATLFKDTH-----NSKLSVSSTPDKRSKWDQFTEKERAGILGHLPV 600
A+ALARAA+KVAKDA L SKL+ ST D S+W QFTE ERA I+G
Sbjct: 112 AVALARAAVKVAKDAALLVKNFPSAETESKLTSPSTID-ASRWPQFTETERARIIGDSVA 170
Query: 601 SDTG 612
++TG
Sbjct: 171 TETG 174
>tr|B9I6F1|B9I6F1_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_834586 PE=4 SV=1
Length = 567
Score = 147 bits (370), Expect = 1e-033
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 11/175 (6%)
Frame = +1
Query: 103 SCLLPNFKCQPDSFSIHFRTSYPVSKHNKSSVYFQPQCAVSTSPPLLTSTLDVSKLRLPS 282
SCLLP FKCQPD+FS+HFR +H+ ++ PQC +S++ P T+ LD+ KLRLPS
Sbjct: 2 SCLLPQFKCQPDTFSVHFRN----LQHHGTNHTQLPQCVLSSASP-STAVLDLEKLRLPS 56
Query: 283 FDTDSDSRISDRPWSYTGTTGLSTEAKYLEALASETLLTSDEAVVAAAVAEALALARAAL 462
+ SDS ++RPW+Y G G + + +LA+ETL+ +DEAV+AAA AEA+ALARAA+
Sbjct: 57 LEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVALARAAV 116
Query: 463 KVAKDATLFKDTHNS-----KLSVSSTPDK-RSKWDQFTEKERAGILGHLPVSDT 609
KVAKDA ++S K+ ++ST D S W TEKERA I+G ++T
Sbjct: 117 KVAKDAAEMAKNYSSMKKETKIPIASTTDSFSSMWSLLTEKERADIIGDSVSAET 171
>tr|B9IPZ1|B9IPZ1_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_780378 PE=4 SV=1
Length = 564
Score = 128 bits (321), Expect = 6e-028
Identities = 78/171 (45%), Positives = 106/171 (61%), Gaps = 16/171 (9%)
Frame = +1
Query: 124 KCQPDSFSIHFRTSYPVSKHNKSSVYFQPQCAVST-SPPLLTSTLDVSKLRLPSFDTDSD 300
KCQPDSFSIH N F+ QCA+S+ SP T+ L++ KLRLPS ++ SD
Sbjct: 9 KCQPDSFSIH---------SNGEPFCFRAQCALSSASPSTSTAVLNLEKLRLPSLESHSD 59
Query: 301 SRISDRPWSYTGTTGLSTEAKYLEALASETLLTSDEAVVAAAVAEALALARAALKVAKDA 480
S ++RPW+Y G G E + +LA+ETL+ +DEAV+AAA AEA+ALARAA+KVAKDA
Sbjct: 60 SIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDEAVIAAAAAEAVALARAAVKVAKDA 119
Query: 481 TLFKDTH-----NSKLSVSSTPDK-RSKWDQFTEKERAGILGHLPVSDTGV 615
+ +K+ ++ST D S W T KERA I+G ++TG+
Sbjct: 120 AEMAKNYCSVNTETKIPIASTADSFSSMWSLLTGKERADIIGVSFSAETGL 170
>tr|Q710C3|Q710C3_SPIOL Sigma factor OS=Spinacia oleracea GN=sig2 PE=2 SV=2
Length = 575
Score = 92 bits (228), Expect = 4e-017
Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Frame = +1
Query: 184 NKSSVYFQPQCAVSTSPP----LLTSTLDVSKLRLPSFDTDSDSRISDRPWSYTGTTGLS 351
N+ V F+PQCAVST PP TS DV KLRLP +++S+S + ++ T G
Sbjct: 36 NRDLVCFRPQCAVSTPPPPTAAAETSIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSP 95
Query: 352 TEAKYLEALASETLLTSDEAVVAAAVAEALALARAALKVAKDATLFKDTHNSKLSVSSTP 531
E K+ AL ++ L+ ++EAV+AAA AEA+ALARAA K+AKDA L VS
Sbjct: 96 AEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLE 155
Query: 532 DKRSKWD--QFTEKERAGILGHLPVSDTGV-VSDRVTAPA 642
+ + Q E E+ G + + S+ + D V+ PA
Sbjct: 156 GQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPA 195
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,140,024,622,024
Number of Sequences: 11397958
Number of Extensions: 5140024622024
Number of Successful Extensions: 1898313281
Number of sequences better than 0.0: 0
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