BLASTX 7.6.2
Query= UN81787 /QuerySize=845
(844 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297826853|ref|XP_002881309.1| frigida-essential 1 [Arabidopsi... 242 7e-062
gi|30685865|ref|NP_850221.1| zinc finger CCCH domain-containing ... 240 2e-061
gi|29367148|gb|AAO72717.1| unknown protein [Arabidopsis thaliana] 226 5e-057
gi|224125542|ref|XP_002329830.1| predicted protein [Populus tric... 64 3e-008
>gi|297826853|ref|XP_002881309.1| frigida-essential 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 242 bits (616), Expect = 7e-062
Identities = 134/224 (59%), Positives = 167/224 (74%), Gaps = 10/224 (4%)
Frame = +3
Query: 192 VSQNGGQRVFPFTNE---RPSLGNIGRGSLQNGGAVFRENRPVFANSISSSFPVRSSFVQ 362
V+ G QRVFP +NE PS NIGR SL+ +NR + N+ S+SF +RSSFV
Sbjct: 195 VNPPGSQRVFPVSNEMRFMPSFENIGRESLKQTYGDVTDNRSLVINN-SNSFTLRSSFVH 253
Query: 363 EHGSSSITSYRQTDVGSSGPAWTGSLFSSAPMNQYDASNLGSFENRSDINGSGSLPMVQA 542
EH SI+SY +TD+GSSGPAWTGSL SS PMN+ AS +G FEN ++I+GSGSLP +Q
Sbjct: 254 EH-RPSISSYLKTDMGSSGPAWTGSLSSSVPMNE-RASTVGHFENGNNISGSGSLPTLQG 311
Query: 543 VSVSS---VQDHRTSNKKKVSSNDWEPSEPFRPSFTIPPYILPSSDALYDPFPDLE-IPQ 710
++VSS + + TSNKKKVSS+DWEPSEPF+ SFTIPPYILPSSDALYDPF D+E +
Sbjct: 312 IAVSSDKGAEGNTTSNKKKVSSDDWEPSEPFKASFTIPPYILPSSDALYDPFTDIENLGG 371
Query: 711 DRSLTAPSSSKGRDAQTRARQQKDGDSSSGPQSQDCNNDDKNSS 842
DR+L A SSKG A+ +RQQKDGDS+SGPQ+++ NDDK+SS
Sbjct: 372 DRALNASLSSKGEHARKNSRQQKDGDSASGPQAREIKNDDKSSS 415
>gi|30685865|ref|NP_850221.1| zinc finger CCCH domain-containing protein 27
[Arabidopsis thaliana]
Length = 587
Score = 240 bits (612), Expect = 2e-061
Identities = 135/224 (60%), Positives = 163/224 (72%), Gaps = 10/224 (4%)
Frame = +3
Query: 192 VSQNGGQRVFPFTNE---RPSLGNIGRGSL-QNGGAVFRENRPVFANSISSSFPVRSSFV 359
V+ G QRVFPF NE PS NI R SL Q GA F +NR + N+ ++SF +RSSFV
Sbjct: 192 VNPPGSQRVFPFNNEMRFMPSFENIRRESLKQTYGADFTDNRSLVINN-ANSFALRSSFV 250
Query: 360 QEHGSSSITSYRQTDVGSSGPAWTGSLFSSAPMNQYDASNLGSFENRSDINGSGSLPMVQ 539
EH SI+SY +TD+GS+GPAWTGSL SS PMN AS +G FEN + ++GSGSLP +Q
Sbjct: 251 HEH-RPSISSYLKTDMGSAGPAWTGSLSSSVPMND-RASTVGDFENGNSLSGSGSLPTLQ 308
Query: 540 AVSVSS---VQDHRTSNKKKVSSNDWEPSEPFRPSFTIPPYILPSSDALYDPFPDLEIPQ 710
V+VSS + + TS KKKVSS+DWEPSEPF+ SFTIPPYILPSSDALYDPF D+E
Sbjct: 309 GVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTIPPYILPSSDALYDPFTDIENLG 368
Query: 711 DRSLTAPSSSKGRDAQTRARQQKDGDSSSGPQSQDCNNDDKNSS 842
DR L SSKG A+ + QQKDGDS+SGPQ++DC NDDK+SS
Sbjct: 369 DRPLNDSLSSKGEHARKSSCQQKDGDSASGPQARDCKNDDKSSS 412
>gi|29367148|gb|AAO72717.1| unknown protein [Arabidopsis thaliana]
Length = 381
Score = 226 bits (574), Expect = 5e-057
Identities = 125/205 (60%), Positives = 152/205 (74%), Gaps = 7/205 (3%)
Frame = +3
Query: 240 PSLGNIGRGSL-QNGGAVFRENRPVFANSISSSFPVRSSFVQEHGSSSITSYRQTDVGSS 416
PS NI R SL Q GA F +NR + N+ ++SF +RSSFV EH SI+SY +TD+GS+
Sbjct: 5 PSXENIRRESLKQTYGADFTDNRSLVINN-ANSFALRSSFVHEH-RPSISSYLKTDMGSA 62
Query: 417 GPAWTGSLFSSAPMNQYDASNLGSFENRSDINGSGSLPMVQAVSVSS---VQDHRTSNKK 587
GPAWTGSL SS PMN AS +G FEN + ++GSGSLP +Q V+VSS + + TS KK
Sbjct: 63 GPAWTGSLSSSVPMND-RASTVGDFENGNSLSGSGSLPTLQGVAVSSDKGAEANTTSTKK 121
Query: 588 KVSSNDWEPSEPFRPSFTIPPYILPSSDALYDPFPDLEIPQDRSLTAPSSSKGRDAQTRA 767
KVSS+DWEPSEPF+ SFTIPPYILPSSDALYDPF D+E DR L SSKG A+ +
Sbjct: 122 KVSSDDWEPSEPFKASFTIPPYILPSSDALYDPFTDIENLGDRPLNDSLSSKGEHARKSS 181
Query: 768 RQQKDGDSSSGPQSQDCNNDDKNSS 842
QQKDGDS+SGPQ++DC NDDK+SS
Sbjct: 182 CQQKDGDSASGPQARDCKNDDKSSS 206
>gi|224125542|ref|XP_002329830.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 64 bits (154), Expect = 3e-008
Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = +3
Query: 435 SLFSSAPMNQYDASNLGSFENRSDINGSGSLP-MVQAVSVSSVQDHRTSNKKKVSSNDWE 611
SL S + D ++ S +S SGS P + SV Q +K K+SSNDWE
Sbjct: 341 SLLGSQKLLDSDRASRSSSLLQSASAFSGSEPESLSLASVPGDQLRHAEHKTKISSNDWE 400
Query: 612 PSEPFRPSFTIPPYILPSSDALYDPFPD---LEIPQDRSLTAPSSSKGRDAQTRARQQKD 782
PS PFRPSF I P ++ S+ + YDP D L D+S S G ++Q
Sbjct: 401 PSVPFRPSFFITPEMISSAGSKYDPLRDSFVLPNVGDKSFKFSFFSLGASISNTSQQPIY 460
Query: 783 GDSSSGPQSQDCNNDDKN 836
GDS S N DK+
Sbjct: 461 GDSLSNRNFGTEFNGDKS 478
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,222,279,010,256
Number of Sequences: 15229318
Number of Extensions: 1222279010256
Number of Successful Extensions: 337045799
Number of sequences better than 0.0: 0
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