BLASTX 7.6.2
Query= UN81819 /QuerySize=846
(845 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G03530.1 | Symbols: ATNAF1, NAF1 | NAF1 (NUCLE... 225 4e-059
TAIR9_protein||AT1G12830.1 | Symbols: | unknown protein | chr1:... 69 3e-012
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 60 2e-009
TAIR9_protein||AT1G47970.1 | Symbols: | unknown protein | chr1:... 60 2e-009
TAIR9_protein||AT3G13150.1 | Symbols: | pentatricopeptide (PPR)... 55 6e-008
>TAIR9_protein||AT1G03530.1 | Symbols: ATNAF1, NAF1 | NAF1 (NUCLEAR ASSEMBLY
FACTOR 1) | chr1:880638-883338 REVERSE
Length = 802
Score = 225 bits (572), Expect = 4e-059
Identities = 127/226 (56%), Positives = 163/226 (72%), Gaps = 24/226 (10%)
Frame = +2
Query: 239 EAEPKLCDDVAA----EQAVEELGSAVSDNSKPMEDVS-------ASVDCPNMKLDEPEL 385
E EP +C +++A E AV++ VS+NS+ ME + ASV CP M LDE L
Sbjct: 148 EVEPNVCVEMSANGGDEPAVKDSEPVVSENSRSMEGETEPVVVSDASVACPTMDLDESGL 207
Query: 386 KKTDVCLA----LGLEKVSLTTGDDEKG-KSISIIAESESEEASSSSSSSSSSGSSSSED 550
KKTD LA +GLEKVSL DDEK ++ + +ESE +SSSS+SSS SSS E+
Sbjct: 208 KKTDEGLACSIEVGLEKVSLAVDDDEKSDEAKGEMDSAESESETSSSSASSSDSSSSEEE 267
Query: 551 EEEEEESDEEDSEEEE--DEMVIVKEDGVAGELEEGEIESADE------VEEDEDEDSDD 706
E +E+ESD+E++++EE + MV+ KED +AGELEEGEIE+ DE +E+++D+D DD
Sbjct: 268 ESDEDESDKEENKKEEKFEHMVVGKEDDLAGELEEGEIENLDEENGDDDIEDEDDDDDDD 327
Query: 707 DDDDDEVNEMIAWSNDEDDDLGLQTKDPIRSKNELKELPPVPAVDV 844
DDDDD+VNEM+AWSNDEDDDLGLQTK+PIRSKNELKELPPVP VDV
Sbjct: 328 DDDDDDVNEMVAWSNDEDDDLGLQTKEPIRSKNELKELPPVPPVDV 373
Score = 206 bits (523), Expect = 2e-053
Identities = 122/230 (53%), Positives = 156/230 (67%), Gaps = 24/230 (10%)
Frame = +2
Query: 191 EAIGQGGEEVQNTVLSEAEPKLCDDVAAEQAVEELGSAVSDNSKPMEDVS-------ASV 349
E +G EV+ V E D E AV++ VS+NS+ ME + ASV
Sbjct: 140 EEVGVSSVEVEPNVCVEMSANGGD----EPAVKDSEPVVSENSRSMEGETEPVVVSDASV 195
Query: 350 DCPNMKLDEPELKKTDVCLA----LGLEKVSLTTGDDEKG-KSISIIAESESEEASSSSS 514
CP M LDE LKKTD LA +GLEKVSL DDEK ++ + +ESE +SSSS
Sbjct: 196 ACPTMDLDESGLKKTDEGLACSIEVGLEKVSLAVDDDEKSDEAKGEMDSAESESETSSSS 255
Query: 515 SSSSSGSSSSEDEEEEEESDEEDSEEEE--DEMVIVKEDGVAGELEEGEIESADE----- 673
+SSS SSS E+E +E+ESD+E++++EE + MV+ KED +AGELEEGEIE+ DE
Sbjct: 256 ASSSDSSSSEEEESDEDESDKEENKKEEKFEHMVVGKEDDLAGELEEGEIENLDEENGDD 315
Query: 674 -VEEDEDEDSDDDDDDDEVNEMIAWSNDEDDDLGLQTKDPIRSKNELKEL 820
+E+++D+D DDDDDDD+VNEM+AWSNDEDDDLGLQTK+PIRSKNELKEL
Sbjct: 316 DIEDEDDDDDDDDDDDDDVNEMVAWSNDEDDDLGLQTKEPIRSKNELKEL 365
Score = 71 bits (172), Expect = 9e-013
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Frame = +2
Query: 17 EEEVELPI--DQDSKV---KDALDFPCIDSYLDFDSCNWLGNNPNIDEFGVKDTDFDFFE 181
EEE+ L + DQD KV KD+ DFP IDS+ DFDS W +N N+++F ++DTDFDFFE
Sbjct: 13 EEELPLQVVADQDPKVKTFKDSFDFPSIDSFPDFDSITWSESNRNVEDFSIEDTDFDFFE 72
Query: 182 DEME 193
ME
Sbjct: 73 YHME 76
>TAIR9_protein||AT1G12830.1 | Symbols: | unknown protein | chr1:4374412-4375053
REVERSE
Length = 214
Score = 69 bits (167), Expect = 3e-012
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Frame = +2
Query: 356 PNMKLDEPELKKTDVCLALGLEKVSLTTGDDEKGKSISIIAESESEEASSSSSSSSSSGS 535
P++ + E K + + +E ++ +T ++ G S+++E +EE S G
Sbjct: 37 PSLNSADSESKDGETNGSGQIENLNSST-EETIGAESSVLSEKAAEEV-----ESGVIGD 90
Query: 536 SSSEDEEEEEESDEEDSEEEEDEMVIVKEDGVAGELEEGEIESADEVEEDEDEDSDDDDD 715
+E+E+E+EE +EED EEEE+E +V G E+ EVEE +DED DDD+
Sbjct: 91 VGAEEEQEDEEDEEEDDEEEEEEEEVVDRKGKGISREDKGKGKMIEVEESDDEDDSDDDE 150
Query: 716 DDEVNEMIAWSNDEDDDL 769
DDE + S+ DD L
Sbjct: 151 DDEGFDEDDESDFSDDPL 168
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 60 bits (144), Expect = 2e-009
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +2
Query: 530 GSSSSEDEEEEEESDEEDSEEEEDEMVIVKEDGVAGELEEGEIESADEVEEDEDEDSDDD 709
G E+EEEEEE +EE+ EEEE+E +E+ E EE E E +E EE+E+E+ +++
Sbjct: 5 GEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 64
Query: 710 DDDDEVNE 733
++D E E
Sbjct: 65 EEDREREE 72
>TAIR9_protein||AT1G47970.1 | Symbols: | unknown protein |
chr1:17687342-17688562 FORWARD
Length = 199
Score = 60 bits (143), Expect = 2e-009
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Frame = +2
Query: 443 DDEKG----KSISIIAESESEE---ASSSSSSSSSSGSSSSEDEEEEEESDEEDSEEEED 601
DD+K I ++++ +S+E S SE +++++E +EED ++++D
Sbjct: 7 DDDKNFKEEPEIQVLSDDDSDEEQVKDVGEEVSDEDDDDGSEGDDDDDEEEEEDDDDDDD 66
Query: 602 EMVIVKEDGVAGELEEGEIESADE----VEEDEDEDSDDDDDDDEVNEMIAWSNDEDDDL 769
V+ G + E E E DE ++D+D D DDDDDDDE ++ +++ DL
Sbjct: 67 VQVLQSLGGPPVQSAEDEDEEGDEDGNGDDDDDDGDDDDDDDDDEDEDV-----EDEGDL 121
Query: 770 GLQ 778
G +
Sbjct: 122 GTE 124
>TAIR9_protein||AT3G13150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:4227975-4229630 REVERSE
Length = 552
Score = 55 bits (130), Expect = 6e-008
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Frame = -3
Query: 771 PRSSSSSLLQAIISFTSSSSSSSSLSSSSSSSTSSALSISPSSSS--PATPSSFTMTISS 598
P SSS ++S + ++ SSSS S SSS +SS++S SP SSS ++P S++ SS
Sbjct: 428 PVSSSPDTSSFLLSLSLAADSSSSDSDSSSPDSSSSVSSSPDSSSSVSSSPDSYSSFSSS 487
Query: 597 --SSSSLSSSSLSSSSSSSSLLELPLELDEEEELEASSLSDSAIILILFPFSSS 442
SSSS+SSS SSS +SS + + + S S S +FP ++S
Sbjct: 488 PDSSSSVSSSLFSSSRENSSSPDYSNSVSSSLDYSGSVSSSSDYSSSVFPSANS 541
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|
