BLASTX 7.6.2
Query= UN81981 /QuerySize=878
(877 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297821485|ref|XP_002878625.1| KH domain-containing protein [A... 393 2e-107
gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidop... 389 5e-106
gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing pr... 389 5e-106
gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, p... 207 2e-051
gi|224097168|ref|XP_002310861.1| predicted protein [Populus tric... 130 4e-028
gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 ... 97 3e-018
gi|225464083|ref|XP_002269250.1| PREDICTED: hypothetical protein... 97 3e-018
gi|225443339|ref|XP_002264125.1| PREDICTED: hypothetical protein... 93 4e-017
gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 ... 68 2e-009
gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 ... 59 1e-006
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 633
Score = 393 bits (1009), Expect = 2e-107
Identities = 202/258 (78%), Positives = 229/258 (88%), Gaps = 11/258 (4%)
Frame = +3
Query: 99 SQRRQVIHVLPNETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCETPATANGSEH 278
S+RR VIHVLP+ETA RVVCHASVIGGIIGSNG V+SKLRR+TG KIHCE+P NGS+H
Sbjct: 12 SKRRPVIHVLPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESP--VNGSDH 69
Query: 279 WVVFIVGSTAVDKSLLLTDRVGDYYSSGDEGEGWVTCEVSAAQTALIRVLERSWAVLAEK 458
WVVFIVGSTAV+KS+LLTDRVGD+ SG E E WVTC+VSAAQTALIRVLERSW VLA K
Sbjct: 70 WVVFIVGSTAVNKSVLLTDRVGDF--SGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAK 127
Query: 459 DSGGVVEEGDGKEAYCGLLADRSQIGAVMGLGGKNVEWMRRNSGAMIRVLPPPLCGANTD 638
D GGVV +G+ +EAYCG+LADR+QIGAV+GLGGKNVEWMRR+SGAMIRVLPPP+CG NTD
Sbjct: 128 DGGGVV-DGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPPPICGTNTD 186
Query: 639 ELIQITGDVLAVKKALVMVSTFLQNSPPLNGYPPPLC-KAYESSSSSTNGNSEDPHSEFF 815
ELIQITGDVLAVKKALVMVST +Q++PP+NGYP PLC KAYE SST+GNSEDPHSEFF
Sbjct: 187 ELIQITGDVLAVKKALVMVSTCIQDNPPVNGYPQPLCIKAYE---SSTDGNSEDPHSEFF 243
Query: 816 PNLRSSSSLPNNASEAAA 869
PNLR SS+PN + A++
Sbjct: 244 PNLR--SSVPNASDSASS 259
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 389 bits (997), Expect = 5e-106
Identities = 201/259 (77%), Positives = 227/259 (87%), Gaps = 10/259 (3%)
Frame = +3
Query: 99 SQRRQVIHVLPNETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCETPATANGSEH 278
S+RR VIHVLP+ETA RVVCHASVIGGIIGSNG V+SKLRR+TG KIHCE+P NGS+H
Sbjct: 12 SKRRPVIHVLPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESP--VNGSDH 69
Query: 279 WVVFIVGSTAVDKSLLLTDRVGDYYSSGDEGEGWVTCEVSAAQTALIRVLERSWAVLAEK 458
WVVFIVGSTAV++S+LLTDRVG++ SG E E WVTCEVSAAQTALIRVLERSW VLA K
Sbjct: 70 WVVFIVGSTAVNQSILLTDRVGEF--SGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAK 127
Query: 459 DSGGVVEEGDGKEAYCGLLADRSQIGAVMGLGGKNVEWMRRNSGAMIRVLPPPLCGANTD 638
D GGVV +G+ +EAYCG+LADR+QIGAV+GLGGKNVEWMRRNSGAMIRVLPPP+CG D
Sbjct: 128 DGGGVV-DGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPICGTKND 186
Query: 639 ELIQITGDVLAVKKALVMVSTFLQNSPPLNGYPPPL-CKAYESSSSSTNGNSEDPHSEFF 815
ELIQITGDVLAVKKALVMVS+++QN+ PLNGYPPPL K YE S ST+GNSEDPHSEFF
Sbjct: 187 ELIQITGDVLAVKKALVMVSSYIQNNAPLNGYPPPLSIKGYE--SLSTDGNSEDPHSEFF 244
Query: 816 PNLRSSSSLPNNASEAAAA 872
PNLRSSS +NA+E A+
Sbjct: 245 PNLRSSSL--SNATEIVAS 261
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein
[Arabidopsis thaliana]
Length = 632
Score = 389 bits (997), Expect = 5e-106
Identities = 201/259 (77%), Positives = 227/259 (87%), Gaps = 10/259 (3%)
Frame = +3
Query: 99 SQRRQVIHVLPNETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCETPATANGSEH 278
S+RR VIHVLP+ETA RVVCHASVIGGIIGSNG V+SKLRR+TG KIHCE+P NGS+H
Sbjct: 12 SKRRPVIHVLPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESP--VNGSDH 69
Query: 279 WVVFIVGSTAVDKSLLLTDRVGDYYSSGDEGEGWVTCEVSAAQTALIRVLERSWAVLAEK 458
WVVFIVGSTAV++S+LLTDRVG++ SG E E WVTCEVSAAQTALIRVLERSW VLA K
Sbjct: 70 WVVFIVGSTAVNQSILLTDRVGEF--SGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAK 127
Query: 459 DSGGVVEEGDGKEAYCGLLADRSQIGAVMGLGGKNVEWMRRNSGAMIRVLPPPLCGANTD 638
D GGVV +G+ +EAYCG+LADR+QIGAV+GLGGKNVEWMRRNSGAMIRVLPPP+CG D
Sbjct: 128 DGGGVV-DGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPICGTKND 186
Query: 639 ELIQITGDVLAVKKALVMVSTFLQNSPPLNGYPPPL-CKAYESSSSSTNGNSEDPHSEFF 815
ELIQITGDVLAVKKALVMVS+++QN+ PLNGYPPPL K YE S ST+GNSEDPHSEFF
Sbjct: 187 ELIQITGDVLAVKKALVMVSSYIQNNAPLNGYPPPLSIKGYE--SLSTDGNSEDPHSEFF 244
Query: 816 PNLRSSSSLPNNASEAAAA 872
PNLRSSS +NA+E A+
Sbjct: 245 PNLRSSSL--SNATEIVAS 261
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative
[Ricinus communis]
Length = 688
Score = 207 bits (526), Expect = 2e-051
Identities = 123/262 (46%), Positives = 159/262 (60%), Gaps = 18/262 (6%)
Frame = +3
Query: 84 NHNRRSQR----RQVIHVLPNETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCET 251
+H R +R R + + P + AFRVVCHAS+IGG+IG +GS IS++RRDTG +HC+
Sbjct: 3 HHRDRRRRPRPTRPPVMLQPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCD- 61
Query: 252 PATANGSEHWVVFIVGSTAVDKSLLLTDRVGDYYSSGDEGEGWVTCEVSAAQTALIRVLE 431
GS+H V+ IVG + K + L ++ +E E + VS AQ A+IRV E
Sbjct: 62 -EQVQGSDHRVITIVGPASPGKRITLNSTTCHDHNGAEEEEKEL---VSVAQEAVIRVCE 117
Query: 432 RSWAVLAEKDSGGVVEEGDGK----EAYCGLLADRSQIGAVMGLGGKNVEWMRRNSGAMI 599
R W V +++ G V+ E YCGLLAD +QIGAV+G GGKNV MRR SGA I
Sbjct: 118 RMWEVDGQRERRGGVDNNSNNSGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADI 177
Query: 600 RVLPPPLCGANTDELIQITGDVLAVKKALVMVSTFLQNSPPLNGYPPPLCKAYESSSSST 779
R LPPP C + D+LIQITG +LAVKKALV V+ L + PP P L + E +S
Sbjct: 178 RFLPPPHCASKDDQLIQITGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLA 237
Query: 780 NGNSEDPHSEFFPNLRSSSSLP 845
S DPH+EFFP+L SS LP
Sbjct: 238 ---SSDPHAEFFPHL--SSLLP 254
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 130 bits (325), Expect = 4e-028
Identities = 75/150 (50%), Positives = 98/150 (65%), Gaps = 10/150 (6%)
Frame = +3
Query: 384 TCEVSAAQTALIRVLERSWAVLAEKDSGGVVEEGDGKEAYCGLLADRSQIGAVMGLGGKN 563
T EVSAAQ A++RVLER W V A KD G E YCGLLA+ SQIGAV+G G+N
Sbjct: 92 TVEVSAAQEAVVRVLERMWEVDAVKDGGDC-------EGYCGLLANTSQIGAVVGREGRN 144
Query: 564 VEWMRRNSGAMIRVLPPPLCGANTDELIQITG-DVLAVKKALVMVSTFLQNSPPLNGYPP 740
++ M+R SGA I +LP PLC D+LIQITG +AVKKA++ +++ LQ+ PP
Sbjct: 145 IKRMKRASGAHIWILPAPLCALKEDQLIQITGSSTVAVKKAVIAITSCLQDCPPYEKDEV 204
Query: 741 PLCKAYESSSSSTNGNSEDPHSEFFPNLRS 830
L + E+ +G+S DPH+EFFP+L S
Sbjct: 205 DL--SLEAVRRRRSGSSGDPHAEFFPHLCS 232
Score = 75 bits (183), Expect = 1e-011
Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = +3
Query: 84 NHNRRSQRRQVIHVLPNETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCETPATA 263
+ ++R R+ +I + P + AFRVVCHAS IG +IG +GSVIS++R +TG +HCE
Sbjct: 8 HRHKRPPRQPLIELQPGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCE--EAV 65
Query: 264 NGSEHWVVFIVGSTAVDKSL 323
GSEH + + GS + ++ +
Sbjct: 66 KGSEHRAIVVAGSASPERKI 85
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis
vinifera]
Length = 288
Score = 97 bits (240), Expect = 3e-018
Identities = 68/186 (36%), Positives = 95/186 (51%), Gaps = 16/186 (8%)
Frame = +3
Query: 135 ETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCETPATANGSEHWVVFIVGSTAVD 314
+ FR++C A+ GG+IG G++I + R DTGAKI + + G + V+ IV + AV
Sbjct: 99 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDD--SVLGCDERVILIV-ADAVK 155
Query: 315 KSLLLTDRVGDYYSSGDEGEGWVTC----------EVSAAQTALIRVLERSWAVLAEKDS 464
+ G + G+E E S AQ AL+RV ER V E++
Sbjct: 156 SKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREE 215
Query: 465 GGVVEEGDGKEAYCGLLADRSQIGAVMGLGGKNVEWMRRNSGAMIRVLPP---PLCGANT 635
E+ C LLA +Q+G V+G GGK VE +R+ SGA IRVLP P C +
Sbjct: 216 KEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPG 275
Query: 636 DELIQI 653
DELIQ+
Sbjct: 276 DELIQV 281
>gi|225464083|ref|XP_002269250.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 648
Score = 97 bits (240), Expect = 3e-018
Identities = 61/116 (52%), Positives = 75/116 (64%), Gaps = 14/116 (12%)
Frame = +3
Query: 390 EVSAAQTALIRVLERSWAVLAEKDS---GGVVEEGDGKEAYCGLLADRSQIGAVMGLGGK 560
E SAAQ A++RV ER V A D GGVV C LLA+ SQ+G+V+G GGK
Sbjct: 120 EASAAQEAVLRVFERILEVAAVVDGVPPGGVVS--------CRLLAETSQVGSVIGKGGK 171
Query: 561 NVEWMRRNSGAMIRVLPP---PLCGANTDELIQITGDVLAVKKALVMVSTFLQNSP 719
VE +RR SG+ I+VL P C A+TDE+++I GDVLAVKKALV VS LQ+ P
Sbjct: 172 VVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDCP 227
Score = 59 bits (140), Expect = 1e-006
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Frame = +3
Query: 117 IHVLPNETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCE-TPATANGSEHWVVFI 293
I V AFR++CHAS IGG+IG +G ++ +L+ DTGA+I E +P+T S+H V+ +
Sbjct: 44 IPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPST---SDHRVILV 100
Query: 294 VGSTAVDKSLLL 329
+ +V++ + L
Sbjct: 101 IAPASVNRRIAL 112
>gi|225443339|ref|XP_002264125.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 704
Score = 93 bits (230), Expect = 4e-017
Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Frame = +3
Query: 390 EVSAAQTALIRVLERSWAVLAEKDSGGVVEEGDGKEAYCGLLADRSQIGAVMGLGGKNVE 569
E S AQ AL+RV ER V E++ E+ C LLA +Q+G V+G GGK VE
Sbjct: 147 ESSPAQQALVRVFERILKVDEEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVE 206
Query: 570 WMRRNSGAMIRVLPP---PLCGANTDELIQITGDVLAVKKALVMVSTFLQNSPPLNGYPP 740
+R+ SGA IRVLP P C + DELIQITG AV+KAL++VS+ LQ++P +
Sbjct: 207 KIRQESGAQIRVLPKDHIPACASPGDELIQITGTFPAVRKALLLVSSCLQDNPRADATNS 266
Query: 741 PLCKAYESSSSSTNGNSEDPHSEFFPNLRSSSSL 842
K + +GN + FP SSL
Sbjct: 267 AAAK---PTGGMLHGNGMPGQLDSFPQRGYGSSL 297
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis
vinifera]
Length = 807
Score = 68 bits (164), Expect = 2e-009
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +3
Query: 390 EVSAAQTALIRVLERSWAVLAEKDSGGVVEEGDGKEAYCGLLADRSQIGAVMGLGGKNVE 569
E S AQ AL+RV ER V E++ E+ C LLA +Q+G V+G GGK VE
Sbjct: 147 ESSPAQQALVRVFERILKVDEEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVE 206
Query: 570 WMRRNSGAMIRVLPP---PLCGANTDELIQ 650
+R+ SGA IRVLP P C + DELIQ
Sbjct: 207 KIRQESGAQIRVLPKDHIPACASPGDELIQ 236
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis
vinifera]
Length = 587
Score = 59 bits (140), Expect = 1e-006
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Frame = +3
Query: 117 IHVLPNETAFRVVCHASVIGGIIGSNGSVISKLRRDTGAKIHCE-TPATANGSEHWVVFI 293
I V AFR++CHAS IGG+IG +G ++ +L+ DTGA+I E +P+T S+H V+ +
Sbjct: 44 IPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPST---SDHRVILV 100
Query: 294 VGSTAVDKSLLL 329
+ +V++ + L
Sbjct: 101 IAPASVNRRIAL 112
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,236,302,456,313
Number of Sequences: 15229318
Number of Extensions: 1236302456313
Number of Successful Extensions: 345715705
Number of sequences better than 0.0: 0
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