BLASTX 7.6.2
Query= UN82029 /QuerySize=877
(876 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G10860.1 | Symbols: | CBS domain-containing p... 289 3e-078
TAIR9_protein||AT1G47271.1 | Symbols: | FUNCTIONS IN: molecular... 135 4e-032
>TAIR9_protein||AT5G10860.1 | Symbols: | CBS domain-containing protein |
chr5:3429173-3430142 REVERSE
Length = 207
Score = 289 bits (737), Expect = 3e-078
Identities = 150/163 (92%), Positives = 154/163 (94%), Gaps = 1/163 (0%)
Frame = +3
Query: 63 MQAVIRSFVSGGNVVRSSLLQHLRVINPAIQPSVLLSSRSESTQPARMEEHGFESTTISD 242
MQ VIRSFVSGGNVV+ S+LQHLRVINPAIQPSV SRSESTQPARMEE GFESTTISD
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSV-FCSRSESTQPARMEESGFESTTISD 59
Query: 243 VMNAKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQSLAGIITERDYLRK 422
VM +KGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQ+LAGIITERDYLRK
Sbjct: 60 VMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRK 119
Query: 423 IIVQGRSSKSTKVGDIMTEENKLITVTPETKVLVAMQLMTVNR 551
IIVQGRSSKSTKVGDIMTEENKLITVTPETKVL AMQLMT NR
Sbjct: 120 IIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNR 162
Score = 95 bits (234), Expect = 6e-020
Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Frame = +3
Query: 360 VKPGEQQSLAGIIT----ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLVA 527
VK Q ++ ++ E+ L II + + V ++ K+ + E L+
Sbjct: 85 VKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 144
Query: 528 MQLMTVNRFVVCVCTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVTEHREELNRLNAFIQG 707
+ T + + TDNRIRHIPVIKDKGMIGMVSIGDVVRAVV EHREEL RLNA+IQG
Sbjct: 145 VTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQG 204
Query: 708 GY* 716
GY*
Sbjct: 205 GY* 207
>TAIR9_protein||AT1G47271.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystathionine
beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana
protein match is: CBS domain-containing protein (TAIR:AT5G10860.1); Has
5358 Blast hits to 5270 proteins in 1084 species: Archae - 620;
Bacteria - 3536; Metazoa - 1; Fungi - 100; Plants - 159; Viruses - 0;
Other Eukaryotes - 942 (source: NCBI BLink). | chr1:17328856-17330343
FORWARD
Length = 194
Score = 135 bits (339), Expect = 4e-032
Identities = 65/125 (52%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
Frame = +3
Query: 210 EHGFESTTISDVMNAKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQSLA 389
E G E+ T++DV++ K D +W+ C T+DTV DAVK+M +HN+G+LVV++PG+QQ +A
Sbjct: 37 EKGLENLTVADVLSTKDTDID-TWISCRTNDTVSDAVKNMAKHNIGSLVVLEPGDQQYIA 95
Query: 390 GIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLVAMQLMTVNRFVVCVC 569
GI+TERDY++KII GRSSK TKVG++MT+E+KL+TV+ T ++ AMQLM+ N
Sbjct: 96 GIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPV 155
Query: 570 TDNRI 584
D +I
Sbjct: 156 IDGKI 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|