BLASTX 7.6.2
Query= UN82096 /QuerySize=338
(337 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|6449448|gb|AAF00075.2|AF094825_1 RNA-binding protein homolog ... 104 6e-021
gi|15230287|ref|NP_188540.1| RNA-binding protein [Arabidopsis th... 86 1e-015
gi|297830560|ref|XP_002883162.1| predicted protein [Arabidopsis ... 84 4e-015
gi|147858321|emb|CAN81423.1| hypothetical protein VITISV_035943 ... 54 4e-006
gi|225428701|ref|XP_002281817.1| PREDICTED: hypothetical protein... 54 4e-006
>gi|6449448|gb|AAF00075.2|AF094825_1 RNA-binding protein homolog [Brassica
napus]
Length = 367
Score = 104 bits (257), Expect = 6e-021
Identities = 54/74 (72%), Positives = 58/74 (78%), Gaps = 7/74 (9%)
Frame = +2
Query: 83 MAQIHREDVESVT------KVLDGGGGGGGGGSSGAQAASSFKFNAEAPEFVPQSRAAVP 244
MAQ+ RE VESVT K+LDGGGGGGGGGSS A ASSFKFNA+APEFVP+S A
Sbjct: 1 MAQMQREPVESVTKETTEKKILDGGGGGGGGGSS-ASKASSFKFNAQAPEFVPRSHATAL 59
Query: 245 APQVSPISGYFYPC 286
PQVSPISGYFYPC
Sbjct: 60 TPQVSPISGYFYPC 73
>gi|15230287|ref|NP_188540.1| RNA-binding protein [Arabidopsis thaliana]
Length = 455
Score = 86 bits (212), Expect = 1e-015
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 9/68 (13%)
Frame = +2
Query: 92 IHREDVESVT---KVLDGGGGGGGGGSSGAQAASSFKFNAEAPEFVPQSRAAVPAPQVSP 262
+ RE+VESVT K LD GGGGSSGAQ A++FKFNA+APEFVP+S PAPQVSP
Sbjct: 4 MQREEVESVTTEKKRLD-----GGGGSSGAQ-ATAFKFNAQAPEFVPRSHTTAPAPQVSP 57
Query: 263 ISGYFYPC 286
+SGYFYPC
Sbjct: 58 VSGYFYPC 65
>gi|297830560|ref|XP_002883162.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 84 bits (207), Expect = 4e-015
Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Frame = +2
Query: 92 IHREDVESVTKVLDGGGGGGGGGSSGAQAASSFKFNAEAPEFVPQSRAAVPAPQVSPISG 271
+ RE+VESVT + G GGGGSSGAQ A++FKFNA+APEFVP+S PA QVSP+SG
Sbjct: 4 MQREEVESVT--TEKKGLDGGGGSSGAQ-ATAFKFNAQAPEFVPRSHTTAPATQVSPVSG 60
Query: 272 YFYPC 286
YFYPC
Sbjct: 61 YFYPC 65
>gi|147858321|emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis
vinifera]
Length = 941
Score = 54 bits (129), Expect = 4e-006
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
Frame = +2
Query: 161 SSGAQAASSFKFNAEAPEFVPQSRAAVPAPQVSPISGYFYPCLSL 295
S+ AA+SFKFNA+APEFVP+S V PISGYFYPC L
Sbjct: 25 STTTSAAASFKFNAQAPEFVPRSHTQV------PISGYFYPCFHL 63
>gi|225428701|ref|XP_002281817.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 412
Score = 54 bits (129), Expect = 4e-006
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
Frame = +2
Query: 161 SSGAQAASSFKFNAEAPEFVPQSRAAVPAPQVSPISGYFYPCLSL 295
S+ AA+SFKFNA+APEFVP+S V PISGYFYPC L
Sbjct: 25 STTTSAAASFKFNAQAPEFVPRSHTQV------PISGYFYPCFHL 63
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,250,501,044,289
Number of Sequences: 15229318
Number of Extensions: 1250501044289
Number of Successful Extensions: 354371223
Number of sequences better than 0.0: 0
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