BLASTX 7.6.2
Query= UN82112 /QuerySize=816
(815 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5ZIN1|NUDC_CHICK Nuclear migration protein nudC OS=Gallus ga... 208 4e-053
sp|Q63525|NUDC_RAT Nuclear migration protein nudC OS=Rattus norv... 204 7e-052
sp|O35685|NUDC_MOUSE Nuclear migration protein nudC OS=Mus muscu... 202 3e-051
sp|Q17QG2|NUDC_BOVIN Nuclear migration protein nudC OS=Bos tauru... 200 2e-050
sp|Q9Y266|NUDC_HUMAN Nuclear migration protein nudC OS=Homo sapi... 199 2e-050
sp|Q54M64|NUDC_DICDI Nuclear movement protein nudC OS=Dictyostel... 133 1e-030
sp|P17624|NUDC_EMENI Nuclear movement protein nudC OS=Emericella... 131 6e-030
sp|O60166|NUDC_SCHPO Nuclear movement protein nudc OS=Schizosacc... 129 4e-029
>sp|Q5ZIN1|NUDC_CHICK Nuclear migration protein nudC OS=Gallus gallus GN=NUDC
PE=2 SV=1
Length = 341
Score = 208 bits (529), Expect = 4e-053
Identities = 109/242 (45%), Positives = 148/242 (61%), Gaps = 9/242 (3%)
Frame = +3
Query: 96 KDSAEKEIATAVTVAKKRLSEVEKKKKKETVKPIEKKLTKESVEPMEVEKPKKDSLKPTE 275
K A + +T + ++E +KKE K + P++ + DS +
Sbjct: 101 KQEANEPRIKELTDEEAERLQLEIDQKKEAQKEVNN-------VPVKSSEDDGDSSDSNK 153
Query: 276 PMEVDKPKEEEKTGPIVPNKGNGLDFEKYSWTQNLQEVTITIP--VPSGTSSRSVTCEIK 449
D+ K+E G + PN GNG D Y WTQ L E+ + IP V + V +I+
Sbjct: 154 QETDDEEKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQ 213
Query: 450 KNRLKVGLKGQDPIIDGEFFNAVKPDDCFWNIEDQKIISVLLTKQDQMQWWKYCVKGEPE 629
+ RL+VGLKG P+IDGE FN VK ++ W IED K ++V L K ++M+WW V +PE
Sbjct: 214 RRRLRVGLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPE 273
Query: 630 IDTQKVEPESSKLSDLDPETRSSVEKMMFDQRQKQMGLPTSDEIEKQDMMKKFMSQHPEM 809
I+T+K+ PE+SKLSDLD ETRS VEKMM+DQRQK MGLPTSDE +KQD++KKFM QHPEM
Sbjct: 274 INTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEM 333
Query: 810 NF 815
+F
Sbjct: 334 DF 335
>sp|Q63525|NUDC_RAT Nuclear migration protein nudC OS=Rattus norvegicus GN=Nudc
PE=1 SV=1
Length = 332
Score = 204 bits (518), Expect = 7e-052
Identities = 101/225 (44%), Positives = 149/225 (66%), Gaps = 3/225 (1%)
Frame = +3
Query: 147 RLSEVEKKKKKETVKPIEKKLTKESVEPMEVEKPKKDSLKPTEPMEVDKPKEEEKTGPIV 326
++ E+ ++ + I++K E+ E ++++ DS + E + ++E+ G +
Sbjct: 103 QIKELTDEEAERLQLEIDQKKDAENHE-VQLKNGSLDSPGKQDAEEEEDEEDEKDKGKLK 161
Query: 327 PNKGNGLDFEKYSWTQNLQEVTITIP--VPSGTSSRSVTCEIKKNRLKVGLKGQDPIIDG 500
PN GNG D Y WTQ L E+ + +P V + V +I++ L+VGLKGQ P+IDG
Sbjct: 162 PNLGNGADLPNYRWTQTLSELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQAPVIDG 221
Query: 501 EFFNAVKPDDCFWNIEDQKIISVLLTKQDQMQWWKYCVKGEPEIDTQKVEPESSKLSDLD 680
E +N VK ++ W IED K+++V L K ++M+WW V +PEI+T+K+ PE+SKLSDLD
Sbjct: 222 ELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLD 281
Query: 681 PETRSSVEKMMFDQRQKQMGLPTSDEIEKQDMMKKFMSQHPEMNF 815
ETRS VEKMM+DQRQK MGLPTSDE +KQ+++KKFM QHPEM+F
Sbjct: 282 SETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDF 326
>sp|O35685|NUDC_MOUSE Nuclear migration protein nudC OS=Mus musculus GN=Nudc
PE=1 SV=1
Length = 332
Score = 202 bits (512), Expect = 3e-051
Identities = 99/225 (44%), Positives = 147/225 (65%), Gaps = 3/225 (1%)
Frame = +3
Query: 147 RLSEVEKKKKKETVKPIEKKLTKESVEPMEVEKPKKDSLKPTEPMEVDKPKEEEKTGPIV 326
++ E+ ++ + I++K E E +++ DS + + + ++E+ G +
Sbjct: 103 QIKELTDEEAERLQLEIDQKKDAEDQE-AQLKNGSLDSPGKQDAEDEEDEEDEKDKGKLK 161
Query: 327 PNKGNGLDFEKYSWTQNLQEVTITIP--VPSGTSSRSVTCEIKKNRLKVGLKGQDPIIDG 500
PN GNG D Y WTQ L E+ + +P V + V +I++ L+VGLKGQ P++DG
Sbjct: 162 PNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDG 221
Query: 501 EFFNAVKPDDCFWNIEDQKIISVLLTKQDQMQWWKYCVKGEPEIDTQKVEPESSKLSDLD 680
E +N VK ++ W IED K+++V L K ++M+WW V +PEI+T+K+ PE+SKLSDLD
Sbjct: 222 ELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLD 281
Query: 681 PETRSSVEKMMFDQRQKQMGLPTSDEIEKQDMMKKFMSQHPEMNF 815
ETRS VEKMM+DQRQK MGLPTSDE +KQ+++KKFM QHPEM+F
Sbjct: 282 SETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDF 326
>sp|Q17QG2|NUDC_BOVIN Nuclear migration protein nudC OS=Bos taurus GN=NUDC PE=2
SV=1
Length = 332
Score = 200 bits (506), Expect = 2e-050
Identities = 100/225 (44%), Positives = 146/225 (64%), Gaps = 3/225 (1%)
Frame = +3
Query: 147 RLSEVEKKKKKETVKPIEKKLTKESVEPMEVEKPKKDSLKPTEPMEVDKPKEEEKTGPIV 326
++ E+ ++ + I++K E+ E +++ S E E ++ +E+ G +
Sbjct: 103 QIKELTDEEAERLQLEIDQKKDAENQE-AQLKNGSLGSPGKQEAEEEEEEDDEKDKGKLK 161
Query: 327 PNKGNGLDFEKYSWTQNLQEVTITIP--VPSGTSSRSVTCEIKKNRLKVGLKGQDPIIDG 500
PN GNG D Y WTQ L E+ + +P V + V +I++ L+VGLKGQ I+DG
Sbjct: 162 PNLGNGADLPSYRWTQTLSELDLAVPFCVNFRLKGKDVVVDIQRRHLRVGLKGQPAIVDG 221
Query: 501 EFFNAVKPDDCFWNIEDQKIISVLLTKQDQMQWWKYCVKGEPEIDTQKVEPESSKLSDLD 680
E +N VK ++ W IED K+++V L K ++M+WW V +PEI+T+K+ PE+SKLSDLD
Sbjct: 222 ELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLD 281
Query: 681 PETRSSVEKMMFDQRQKQMGLPTSDEIEKQDMMKKFMSQHPEMNF 815
ETRS VEKMM+DQRQK MGLPTSDE +KQ+++KKFM QHPEM+F
Sbjct: 282 SETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDF 326
>sp|Q9Y266|NUDC_HUMAN Nuclear migration protein nudC OS=Homo sapiens GN=NUDC
PE=1 SV=1
Length = 331
Score = 199 bits (505), Expect = 2e-050
Identities = 94/180 (52%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
Frame = +3
Query: 282 EVDKPKEEEKTGPIVPNKGNGLDFEKYSWTQNLQEVTITIP--VPSGTSSRSVTCEIKKN 455
E D+ ++E+ G + PN GNG D Y WTQ L E+ + +P V + + +I++
Sbjct: 146 EEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR 205
Query: 456 RLKVGLKGQDPIIDGEFFNAVKPDDCFWNIEDQKIISVLLTKQDQMQWWKYCVKGEPEID 635
L+VGLKGQ IIDGE +N VK ++ W IED K+++V L K ++M+WW V +PEI+
Sbjct: 206 HLRVGLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEIN 265
Query: 636 TQKVEPESSKLSDLDPETRSSVEKMMFDQRQKQMGLPTSDEIEKQDMMKKFMSQHPEMNF 815
T+K+ PE+SKLSDLD ETRS VEKMM+DQRQK MGLPTSDE +KQ+++KKFM QHPEM+F
Sbjct: 266 TKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDF 325
>sp|Q54M64|NUDC_DICDI Nuclear movement protein nudC OS=Dictyostelium discoideum
GN=nudc PE=3 SV=1
Length = 171
Score = 133 bits (334), Expect = 1e-030
Identities = 61/155 (39%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Frame = +3
Query: 354 EKYSWTQNLQEVTITIPVPSGTSSRSVTCEIKKNRLKV-GLKGQDPIIDGEFFNAVKPDD 530
++Y+W+Q L + T++I + + S+ + +I + L V L D IIDG+ + VK D
Sbjct: 11 DRYTWSQTLNDCTLSIKLENPVKSKDLFIKIDNDHLTVKNLITNDTIIDGKLYKNVKKSD 70
Query: 531 CFWNIEDQKIISVLLTKQDQMQWWKYCVKGEPEIDTQKVEPESSKLSDLDPETRSSVEKM 710
C W +E K + + L K +WW ++GE EID +++P++S LSD D ETR+ VEKM
Sbjct: 71 CNWTLESGKNLEIELFKLKGQEWWSCIIQGESEIDVTQIKPQNSSLSDFDGETRAMVEKM 130
Query: 711 MFDQRQKQMGLPTSDEIEKQDMMKKFMSQHPEMNF 815
+++Q +K GLPT+DE EKQ + + F ++HP+M+F
Sbjct: 131 LYNQNRKAQGLPTTDEEEKQRIFETFKNEHPDMDF 165
>sp|P17624|NUDC_EMENI Nuclear movement protein nudC OS=Emericella nidulans
GN=nudC PE=3 SV=1
Length = 198
Score = 131 bits (329), Expect = 6e-030
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 13/197 (6%)
Frame = +3
Query: 240 EKPKKDSLKPTEPMEVDKPKEEEKTGPIVPNKGNGLDFEKYSWTQNLQEVTITIPVPSGT 419
++P L E E + EE +P K++ T +VTI +
Sbjct: 4 QEPSSADLAAREAEEKQRKAAEEAEQATLP--------YKWTQTIRDVDVTIPVSANLKG 55
Query: 420 SSRSVTCEIKKNRLKVGLKGQDPIIDGEFFNAVKPDDCFWNIEDQ-----KIISVLLTKQ 584
V + ++KV + + IDG+F + +KP + W +E K +S+ L K
Sbjct: 56 RDLDVVLKKDSIKVKVKGENGEVFIDGQFPHPIKPSESSWTLETTSKPPGKEVSIHLDKV 115
Query: 585 DQMQWWKYCVKGEPEIDTQKVEPESSKLSDLDPETRSSVEKMMFDQRQKQMGLPTSDEIE 764
+QM+WW + V P+ID K+ PE+S LSDLD ETR+ VEKMM+DQRQK+MG PTSDE
Sbjct: 116 NQMEWWAHVVTTAPKIDVSKITPENSSLSDLDGETRAMVEKMMYDQRQKEMGAPTSDEQR 175
Query: 765 KQDMMKKFMSQHPEMNF 815
K D++KKF +HPEM+F
Sbjct: 176 KMDILKKFQKEHPEMDF 192
>sp|O60166|NUDC_SCHPO Nuclear movement protein nudc OS=Schizosaccharomyces pombe
GN=nudc PE=2 SV=1
Length = 166
Score = 129 bits (322), Expect = 4e-029
Identities = 60/159 (37%), Positives = 101/159 (63%), Gaps = 7/159 (4%)
Frame = +3
Query: 345 LDFEKYSWTQNLQEVTITIPVPSGTSSRSVTCEIKKNRLK--VGLKGQDPIIDGEFFNAV 518
L+ +Y W Q + +V I I VP GT ++S+ ++ + LK + + + ++ G +
Sbjct: 6 LEEAEYEWDQTIADVDIVIHVPKGTRAKSLQVDMSNHDLKIQINVPERKVLLSGPLEKQI 65
Query: 519 KPDDCFWNIEDQKIISVLLTKQDQMQWWKYCVKGEPEIDTQKVEPESSKLSDLDPETRSS 698
D+ W +E+Q+ + + L K ++M+WW +KG P ID +EPE+SKLSDLD ETR++
Sbjct: 66 NLDESTWTVEEQERLVIHLEKSNKMEWWSCVIKGHPSIDIGSIEPENSKLSDLDEETRAT 125
Query: 699 VEKMMFDQRQKQMGLPTSDEIEKQDMMKKFMSQHPEMNF 815
VEKMM +Q QK+ +DE +++D+++ FM QHPE++F
Sbjct: 126 VEKMMLEQSQKR-----TDEQKRKDVLQNFMKQHPELDF 159
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,818,014,972
Number of Sequences: 518415
Number of Extensions: 259818014972
Number of Successful Extensions: 1673700095
Number of sequences better than 0.0: 0
|
