BLASTX 7.6.2
Query= UN82187 /QuerySize=854
(853 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297796163|ref|XP_002865966.1| hypothetical protein ARALYDRAFT... 213 3e-053
gi|297851488|ref|XP_002893625.1| hypothetical protein ARALYDRAFT... 201 1e-049
gi|15223258|ref|NP_174543.1| putative F-box protein [Arabidopsis... 154 2e-035
gi|15221502|ref|NP_174365.1| F-box domain-containing protein [Ar... 121 2e-025
gi|4926821|gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana] 121 2e-025
gi|297846032|ref|XP_002890897.1| hypothetical protein ARALYDRAFT... 118 2e-024
gi|297846240|ref|XP_002891001.1| predicted protein [Arabidopsis ... 97 2e-018
gi|297812415|ref|XP_002874091.1| predicted protein [Arabidopsis ... 92 9e-017
gi|297812411|ref|XP_002874089.1| hypothetical protein ARALYDRAFT... 90 3e-016
gi|15231179|ref|NP_190800.1| putative F-box protein [Arabidopsis... 83 5e-014
gi|297840545|ref|XP_002888154.1| hypothetical protein ARALYDRAFT... 79 1e-012
gi|238481346|ref|NP_001154731.1| F-box family protein [Arabidops... 73 4e-011
gi|297819270|ref|XP_002877518.1| hypothetical protein ARALYDRAFT... 73 6e-011
gi|297793847|ref|XP_002864808.1| predicted protein [Arabidopsis ... 72 7e-011
gi|297793843|ref|XP_002864806.1| hypothetical protein ARALYDRAFT... 66 5e-009
gi|297841781|ref|XP_002888772.1| hypothetical protein ARALYDRAFT... 65 2e-008
gi|297834148|ref|XP_002884956.1| hypothetical protein ARALYDRAFT... 64 3e-008
gi|15241905|ref|NP_201072.1| putative F-box protein [Arabidopsis... 62 1e-007
>gi|297796163|ref|XP_002865966.1| hypothetical protein ARALYDRAFT_357572
[Arabidopsis lyrata subsp. lyrata]
Length = 455
Score = 213 bits (541), Expect = 3e-053
Identities = 133/266 (50%), Positives = 169/266 (63%), Gaps = 14/266 (5%)
Frame = +3
Query: 81 SILEPIPLDLKKKMDRL-TRSPAKSDQKEICDSRDK----GVGSDKSRPGKKLQVILPYD 245
S LEPI LDL K+ RL + K+ QK++ + G + K +P+D
Sbjct: 14 SSLEPIHLDL--KLTRLPAKFLMKTHQKKLLCRVESLVLLGTAIKREDDQKDKLDPIPFD 71
Query: 246 MEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA--AKPPRFTVTFTNSVFSE-- 413
+EVE L RLP KSLM+F CVSK WS +IRSQRFV SYYA + RFTVTF+N +F+E
Sbjct: 72 LEVEILTRLPAKSLMKFQCVSKMWSFIIRSQRFVDSYYALSSTRSRFTVTFSNGLFAEDD 131
Query: 414 PKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFIICNP 593
+RLFIFS E SSSLVA LD+TIP VTM + K S+HGF++ + +FI+CNP
Sbjct: 132 ARRLFIFSSSYE-EEKSSSLVAKLDITIPVVTMDYRS-KCPSIHGFVSCCNGPQFIVCNP 189
Query: 594 STGQVITFHCKATDTCLGYDPVGDQFKALTLLTSTYAHNPSFMVHEVKRLGRGGIVSRTQ 773
ST QVIT K LGYDPVG+QFK L L++S + F+VHEV LG GG SR Q
Sbjct: 190 STRQVITLPIKGPRASLGYDPVGEQFKVLNLVSSPDMY-LGFLVHEVITLGGGGEESRNQ 248
Query: 774 VTSPPYHPITRGRCINGFMYYGASVP 851
VT+ PY+P+T+G ING +Y+GA P
Sbjct: 249 VTTAPYYPVTKGLYINGSIYHGAWAP 274
>gi|297851488|ref|XP_002893625.1| hypothetical protein ARALYDRAFT_336147
[Arabidopsis lyrata subsp. lyrata]
Length = 538
Score = 201 bits (511), Expect = 1e-049
Identities = 132/287 (45%), Positives = 165/287 (57%), Gaps = 26/287 (9%)
Frame = +3
Query: 48 MKGKEHEKGS------RSILEPIPLDLKKKMDR---LTRSPAKSDQKEIC-DSRDKGVGS 197
MK ++ +KG S L+PIP LK + L ++P K K +C + RD
Sbjct: 1 MKRRDDKKGRLCSISIPSKLDPIPFVLKMVLATAKFLNKTPQK---KHLCREERDINKYD 57
Query: 198 DKSRPGKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA----A 365
+K K+ I P D+EVE L RLP KSL++F CVSKTWSS+IRSQRF+ SYYA
Sbjct: 58 EKDTSPSKVDSI-PLDLEVEILTRLPAKSLIKFQCVSKTWSSIIRSQRFIDSYYALSSTM 116
Query: 366 KPPRFTVTFTN--SVFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSS 539
+ RF + F+N S E KRLFIFS E SSSSLV NLDMTIPSVT+ +S
Sbjct: 117 RSDRFIIAFSNGESAKREDKRLFIFSSSYEGHESSSSLVTNLDMTIPSVTV-ICFSTCAS 175
Query: 540 VHGFMAVNDRLKFIICNPSTGQVITFHCKATDTCLGYDPVGDQFKALTLLTSTYAHNPSF 719
VHG + F++CNP TG+V C T GYDPV QFKALT ++ P F
Sbjct: 176 VHGLIGSTRSGPFLVCNPCTGKVTMLPCSGAHTSFGYDPVDGQFKALTQVSPYSYQEPDF 235
Query: 720 MVHEVKRLGRG---GIVSRTQVTSPPYHPITRGRCINGFMYYGASVP 851
+VHEV LG G IV + VT+P Y+ TR CINGF+Y+GA P
Sbjct: 236 LVHEVLTLGGGESSWIVKK--VTTPVYYTATRKLCINGFVYFGAWTP 280
>gi|15223258|ref|NP_174543.1| putative F-box protein [Arabidopsis thaliana]
Length = 446
Score = 154 bits (388), Expect = 2e-035
Identities = 105/277 (37%), Positives = 152/277 (54%), Gaps = 24/277 (8%)
Frame = +3
Query: 48 MKGKEHEKGSRSI-----LEPIPLDLKKKMDRLTRSPAKSDQKEICDSRDKGVGSDKSRP 212
MK K+ ++ RS L+PIPLDLK + P KS K+ ++ + + + P
Sbjct: 1 MKRKDDDQEDRSCSSASKLDPIPLDLK-----MATVPTKSHMKKSHQNKLEEDEKEDTNP 55
Query: 213 GKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA--AKPPRFTV 386
K LP D+++ L R+P KSLM+ CVSK WSS+IRS+ F+ SYYA +K RF V
Sbjct: 56 SKLELDSLPLDLKMAILTRIPAKSLMKLRCVSKMWSSIIRSRGFIDSYYAISSKQSRFIV 115
Query: 387 TFTNSVFSEPKR----LFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFM 554
+N+ F+EP++ LF FS E+ SSSSSLV N +M +P ++ + +S HG +
Sbjct: 116 GLSNAAFNEPEKQLTFLFSFSHEDGEKSSSSSLVPNFEMAVP-CSLAGLSHSLASFHGIL 174
Query: 555 AVNDRLKFIICNPSTGQVITFHCKATDTCLGYDPVGDQFKALTLLTSTYAHNPSFMVHEV 734
AV + ++CNP+T Q T +GYDP+ DQ+KAL H + + H+V
Sbjct: 175 AVEGK---VMCNPNTEQFTTL--PVGTIFVGYDPIDDQYKALGFDFDKRCHG-NAIGHKV 228
Query: 735 KRLGRGGIVSRTQVTSPPYHPITRGR-CINGFMYYGA 842
LG G + + + PY PI CING +YYGA
Sbjct: 229 WTLGGGEGMRQIRGDLAPYRPILLPNVCINGVIYYGA 265
>gi|15221502|ref|NP_174365.1| F-box domain-containing protein [Arabidopsis
thaliana]
Length = 399
Score = 121 bits (301), Expect = 2e-025
Identities = 67/131 (51%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAKPPRFTVTFTNSVF 407
+P+D+ VE L RLP KSLM+F CVSK WSS+I +Q F+ S+Y ++ PRF V F+N F
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSF 68
Query: 408 --SEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFG-GYKYSSVHGFMAVNDRLKF 578
+ KRLFIFS E SSSS++ NLD TIPS+T+ + SV+GF+A + +F
Sbjct: 69 PSDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSLYTRF 128
Query: 579 IICNPSTGQVI 611
ICNPST QVI
Sbjct: 129 TICNPSTRQVI 139
>gi|4926821|gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana]
Length = 502
Score = 121 bits (301), Expect = 2e-025
Identities = 67/131 (51%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAKPPRFTVTFTNSVF 407
+P+D+ VE L RLP KSLM+F CVSK WSS+I +Q F+ S+Y ++ PRF V F+N F
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSF 68
Query: 408 --SEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFG-GYKYSSVHGFMAVNDRLKF 578
+ KRLFIFS E SSSS++ NLD TIPS+T+ + SV+GF+A + +F
Sbjct: 69 PSDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSLYTRF 128
Query: 579 IICNPSTGQVI 611
ICNPST QVI
Sbjct: 129 TICNPSTRQVI 139
>gi|297846032|ref|XP_002890897.1| hypothetical protein ARALYDRAFT_473309
[Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 118 bits (294), Expect = 2e-024
Identities = 67/131 (51%), Positives = 89/131 (67%), Gaps = 5/131 (3%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAKPPRFTVTFTNSVF 407
+P D+ VE L RLP KSL+RF CVSK WSS+I+SQ F+ S+Y ++ PR V FTN +F
Sbjct: 9 IPLDLTVEILTRLPAKSLLRFKCVSKLWSSIIQSQGFIDSFYSISSTRPRSIVAFTNGLF 68
Query: 408 S--EPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFG-GYKYSSVHGFMAVNDRLKF 578
+ E KR FIFS +E SSSS++ NLD+TIPS+T+ + SV+GF+A +
Sbjct: 69 AKDEDKRFFIFSSSQEGHESSSSVINNLDITIPSLTVCNNPASRCVSVNGFVACSLNTGL 128
Query: 579 IICNPSTGQVI 611
+ICNPST QVI
Sbjct: 129 MICNPSTRQVI 139
>gi|297846240|ref|XP_002891001.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 166
Score = 97 bits (241), Expect = 2e-018
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Frame = +3
Query: 75 SRSILEPIPLDLKKKMDRLTRSPAKSDQKEICDSRDKGVGSDKSRPGKKLQVILPYDMEV 254
S S L+PIPLDLK +T P+KS K+ ++ + +D + P K LP D+++
Sbjct: 14 SPSKLDPIPLDLK-----MTTVPSKSHMKKSHQNKLEEDENDTTNPSKLDS--LPLDLKM 66
Query: 255 ETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA--AKPPRFTVTFTNSVFSEPKR-- 422
L R+P KSLM+ CVSK WSS+IRS+ F+ SYYA ++ RF V F+N VF P+
Sbjct: 67 AILTRMPAKSLMKLRCVSKMWSSIIRSRGFIDSYYATSSRQSRFIVGFSNGVFGTPEERL 126
Query: 423 LFIFSGEEEVTSSSSSLVANLDMTIPS 503
F FS + SSSL+ +M +P+
Sbjct: 127 TFFFSFSHDEGQESSSLLPTFEMAVPT 153
>gi|297812415|ref|XP_002874091.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 92 bits (227), Expect = 9e-017
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTFTNSVFSE 413
+P+D+ +E L +LP KSL+RF VSK W S+IRS+ F S+ R + FT F
Sbjct: 116 IPFDLTLEILSKLPAKSLIRFQAVSKLWFSIIRSKDFTDSFLTRSKTRPRLLFTFKHFDS 175
Query: 414 PKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFIICNP 593
KR + E + SS++VA DMTI + + V+GF+ +CNP
Sbjct: 176 RKRFIFSAPEHDNNDKSSTVVARHDMTISDLVYYI---RSRPVNGFVCCTRGDSIAVCNP 232
Query: 594 STGQVITF-----HCKATDTCLGYDPVGDQFKAL 680
+T Q++ F + + LGYDPV DQ+K L
Sbjct: 233 TTRQIVKFPDVKSNGRDVYARLGYDPVQDQYKVL 266
>gi|297812411|ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273
[Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 90 bits (222), Expect = 3e-016
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKP--PRFTVTFTNSVF 407
+P D+ +E L RLP KSL+RF VSK W S+IRS+ FV S+ PRF +TF N F
Sbjct: 22 IPLDLTLEILSRLPAKSLIRFQAVSKFWFSIIRSKDFVDSFLTRSKTRPRFLLTFKN--F 79
Query: 408 SEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFIIC 587
KR + E + SS++ A DMTI + + + V+GF+ +C
Sbjct: 80 DSRKRFIFSAPEHQKNDKSSTVFARHDMTISADRVYH--IRCRPVNGFVCCTRGDSIAVC 137
Query: 588 NPSTGQVITF-----HCKATDTCLGYDPVGDQFKALTLL 689
NP+T Q++ + + LGYDPV DQ+K L ++
Sbjct: 138 NPTTRQIVKLPDVESNGRHVYARLGYDPVEDQYKVLCVM 176
>gi|15231179|ref|NP_190800.1| putative F-box protein [Arabidopsis thaliana]
Length = 390
Score = 83 bits (203), Expect = 5e-014
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTFTNSVFSE 413
+P +M ++ LIRLP KSLMRF CVSK W SLI S+ F ++ P + ++
Sbjct: 27 IPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDRENQ 86
Query: 414 PKRLFIFSGEEEVTSSSSSLVANLDM--TIPSVTMPFGGYKYSSVHGFMAVNDRLKFIIC 587
K L + S S + V+ +D TIP + GGY ++ G + + +C
Sbjct: 87 SKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIM----GGYLVNAARGLLCYRTGRRVKVC 142
Query: 588 NPSTGQVITFHCKATDT----CLGYDPVGDQFKALTL 686
NPST Q++ + T G+DP D++K L+L
Sbjct: 143 NPSTRQIVELPIMRSKTNVWNWFGHDPFHDEYKVLSL 179
>gi|297840545|ref|XP_002888154.1| hypothetical protein ARALYDRAFT_893536
[Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 79 bits (192), Expect = 1e-012
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 22/243 (9%)
Frame = +3
Query: 156 QKEICDSRDKGVGSDKSRPGKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRS 335
++E + ++ + S + +K V++P D+ E L+RLP KS+ +F CVSK WSS+
Sbjct: 4 REEEAEDKEISIQSKEDESCRKFLVMIPLDLIHEILLRLPAKSVAKFRCVSKLWSSITTR 63
Query: 336 QRFVASYYAAKPPRFTVTFTNSVFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMP 515
F+ S+ + R + V + +RL + E +S S +++ +
Sbjct: 64 PDFIRSFVSQSSTRLCLFV--CVNTRDERLSCSIPQHE--NSDRSSYPHVERYRKNAPKF 119
Query: 516 FGGYKYS-SVHGFMAVNDRL-KFIICNPSTGQVITF-----HCKATDTCLGYDPVGDQFK 674
+YS SVHG + + D ++ NP+ Q +T +CLGYDPV ++K
Sbjct: 120 DYHQRYSESVHGLIGLGDFCGNIVVWNPTMRQHVTLPKPEPRVPCVCSCLGYDPVEGKYK 179
Query: 675 ALTLLTSTYAHNPSFMVHEVKRLGRGGIVSRTQVTSPPYHP----ITRGRCINGFMYYGA 842
L + Y F + + R SP + P + +CING +YY A
Sbjct: 180 VLCISGYRYQDPLVFTLGPQESW-------RVAQNSPKHVPRCTWVLISKCINGNLYYEA 232
Query: 843 SVP 851
S+P
Sbjct: 233 SIP 235
>gi|238481346|ref|NP_001154731.1| F-box family protein [Arabidopsis thaliana]
Length = 355
Score = 73 bits (178), Expect = 4e-011
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTFTNSVFSE 413
+P+D+ +E + RLP K ++RF VSK W S IRS+ F S+ R + FT F
Sbjct: 22 IPFDLTLEIVSRLPAKPIIRFQAVSKLWFSTIRSKNFTDSFLTRSKTRPRLFFTFKHFDS 81
Query: 414 PKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFIICNP 593
KR + E + SS++VA DMTI V + V+G +CNP
Sbjct: 82 RKRFIFSAPERDNNDKSSTVVARHDMTISDVAY----IRSLPVNGLFCYTRGDSIAVCNP 137
Query: 594 STGQVI 611
+T Q++
Sbjct: 138 TTRQIV 143
>gi|297819270|ref|XP_002877518.1| hypothetical protein ARALYDRAFT_905899
[Arabidopsis lyrata subsp. lyrata]
Length = 444
Score = 73 bits (177), Expect = 6e-011
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 13/129 (10%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRF----VASYYAAKPPRFTVTFTNS 401
+P D+++ETL+RLP KSL+RF CVSK WSS+I SQ F + ++ P R +TF +
Sbjct: 52 IPLDLQIETLLRLPVKSLLRFQCVSKLWSSIITSQDFRNRQLNFAASSAPSRLLITFYDF 111
Query: 402 VFSEPKRLFIFSGEEEVTSSS---SSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRL 572
+ K + +FS SSS S LV D+++ + G Y++V G + + +
Sbjct: 112 L---GKVILLFSLPYPNVSSSSPPSRLVRYKDLSLFKL---HGRKVYNAVRGLICIGSKR 165
Query: 573 KFIICNPST 599
K ICNPST
Sbjct: 166 KVGICNPST 174
>gi|297793847|ref|XP_002864808.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 72 bits (176), Expect = 7e-011
Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAA----KPPRFTVTFTNS 401
+P D+++E LIRLP KSLMRF CVSK W SLIRS+ F Y +PPR ++ +
Sbjct: 87 IPLDLQIEILIRLPAKSLMRFKCVSKLWFSLIRSRCFSNCYLKVASPPRPPRLYMSLVDH 146
Query: 402 VFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMP-FGGYKYSSVHGFMAVNDRLKF 578
+ + E + S SSS N + MP GG + G + K
Sbjct: 147 IQCNSMEVCYNPRESVLLSLSSSSSTNAKSFHQDLAMPGMGGRNMMILRGLILYIVCRKA 206
Query: 579 IICNPSTGQVITFHCKATDTCLGYDPVGDQFKALTLLTSTYA 704
I NP+T Q C + + C Y+P +L+ +ST A
Sbjct: 207 CIYNPTTRQC----CNSMEVC--YNPCESVLLSLSSSSSTDA 242
>gi|297793843|ref|XP_002864806.1| hypothetical protein ARALYDRAFT_358465
[Arabidopsis lyrata subsp. lyrata]
Length = 475
Score = 66 bits (160), Expect = 5e-009
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIR----SQRFVASYYAAKPPRFTVTFTNS 401
+P D+++E LIRLP KSLMRF CVSK W SLIR S R++ + PR ++ +
Sbjct: 14 IPLDLQIEILIRLPAKSLMRFKCVSKLWFSLIRCRYFSNRYLTVASPPRAPRLYMSLVDH 73
Query: 402 VFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMP-FGGYKYSSVHGFMAVNDRLKF 578
+ + E + S SSS + +TMP GG + G + K
Sbjct: 74 IQCNSMEVCYNPRESVLLSLSSSSSTDAKSFHQDLTMPGMGGRNMMILRGLILYIVCRKA 133
Query: 579 IICNPSTGQVIT 614
I NP+T Q +T
Sbjct: 134 CIYNPTTRQCVT 145
>gi|297841781|ref|XP_002888772.1| hypothetical protein ARALYDRAFT_894842
[Arabidopsis lyrata subsp. lyrata]
Length = 344
Score = 65 bits (156), Expect = 2e-008
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTFT------ 395
LP DM++E L RLP KSLM +CVSK W+S+IRS+ F Y + R V F
Sbjct: 9 LPLDMQMEILSRLPLKSLMGCMCVSKKWASIIRSKAFRDHYLSRSMTRPRVLFVANHREF 68
Query: 396 NSVFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLK 575
+ SE ++ EE + S + + ++ + V+ P + G + K
Sbjct: 69 HKFTSEAFFYSVYQEEEPLWLSGKQQMRSEEVPLLKVSQP--------ILGLICQQGNTK 120
Query: 576 FIICNPST------GQVITFHCKATDTCLGYDPVGDQFKALTLLTST 698
+ICNP + Q+ + + GYD D FK L + +T
Sbjct: 121 IVICNPGSKNCRTLPQIKVPKGASMTSFFGYDKDKDVFKVLCITKAT 167
>gi|297834148|ref|XP_002884956.1| hypothetical protein ARALYDRAFT_897547
[Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 64 bits (153), Expect = 3e-008
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 213 GKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTF 392
G KL +P D+ +E L+RLP KS++RF CVSK WSS+I + F+ S+ R ++
Sbjct: 8 GTKLSSWIPLDVTIEILLRLPAKSVVRFRCVSKLWSSMISTPNFIKSFAVHSSARPSILS 67
Query: 393 TNSVFSEPKRLFI-FSGEEEVTSSSSSLVANLDMTI 497
+ E KR+F F +++ + +S++ DM I
Sbjct: 68 CSVKKEEGKRVFFSFPHQQDPKNPYTSILDKFDMII 103
>gi|15241905|ref|NP_201072.1| putative F-box protein [Arabidopsis thaliana]
Length = 379
Score = 62 bits (148), Expect = 1e-007
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAK----PPRFTVTFTNS 401
+P D+ +E L +LP KSLMRF CVSK WSSLIRS+ F Y K PPR ++ +
Sbjct: 41 IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDH 100
Query: 402 VFSEPKRLFIFSGEEEVTSSSSS 470
+ + + E + SSSSS
Sbjct: 101 LLCNSLMVCHYPCESVLLSSSSS 123
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,250,501,044,289
Number of Sequences: 15229318
Number of Extensions: 1250501044289
Number of Successful Extensions: 354371223
Number of sequences better than 0.0: 0
|
