BLASTX 7.6.2
Query= UN82187 /QuerySize=854
(853 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G32660.1 | Symbols: | F-box family protein | ... 154 8e-038
TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein | ... 121 1e-027
TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein | ... 85 6e-017
TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein | ... 83 2e-016
TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein | ... 77 9e-015
TAIR9_protein||AT5G22791.2 | Symbols: | FUNCTIONS IN: molecular... 73 2e-013
TAIR9_protein||AT2G40910.2 | Symbols: | F-box protein-related |... 68 6e-012
TAIR9_protein||AT2G40910.1 | Symbols: | F-box protein-related |... 68 6e-012
TAIR9_protein||AT2G16810.1 | Symbols: | F-box family protein (F... 67 1e-011
TAIR9_protein||AT1G30780.1 | Symbols: | F-box family protein | ... 67 1e-011
TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein | ... 66 2e-011
TAIR9_protein||AT4G19940.1 | Symbols: | F-box family protein | ... 65 5e-011
TAIR9_protein||AT1G70960.1 | Symbols: | F-box family protein | ... 62 4e-010
TAIR9_protein||AT4G19930.1 | Symbols: | F-box family protein | ... 62 4e-010
TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein | ... 62 5e-010
TAIR9_protein||AT5G44220.1 | Symbols: | F-box family protein | ... 55 4e-008
TAIR9_protein||AT5G62510.1 | Symbols: | F-box family protein | ... 55 5e-008
TAIR9_protein||AT1G47800.1 | Symbols: | F-box family protein | ... 55 6e-008
TAIR9_protein||AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular... 51 9e-007
TAIR9_protein||AT1G47730.1 | Symbols: | F-box family protein | ... 50 1e-006
>TAIR9_protein||AT1G32660.1 | Symbols: | F-box family protein |
chr1:11811040-11812380 FORWARD
Length = 447
Score = 154 bits (388), Expect = 8e-038
Identities = 105/277 (37%), Positives = 152/277 (54%), Gaps = 24/277 (8%)
Frame = +3
Query: 48 MKGKEHEKGSRSI-----LEPIPLDLKKKMDRLTRSPAKSDQKEICDSRDKGVGSDKSRP 212
MK K+ ++ RS L+PIPLDLK + P KS K+ ++ + + + P
Sbjct: 1 MKRKDDDQEDRSCSSASKLDPIPLDLK-----MATVPTKSHMKKSHQNKLEEDEKEDTNP 55
Query: 213 GKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA--AKPPRFTV 386
K LP D+++ L R+P KSLM+ CVSK WSS+IRS+ F+ SYYA +K RF V
Sbjct: 56 SKLELDSLPLDLKMAILTRIPAKSLMKLRCVSKMWSSIIRSRGFIDSYYAISSKQSRFIV 115
Query: 387 TFTNSVFSEPKR----LFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFM 554
+N+ F+EP++ LF FS E+ SSSSSLV N +M +P ++ + +S HG +
Sbjct: 116 GLSNAAFNEPEKQLTFLFSFSHEDGEKSSSSSLVPNFEMAVP-CSLAGLSHSLASFHGIL 174
Query: 555 AVNDRLKFIICNPSTGQVITFHCKATDTCLGYDPVGDQFKALTLLTSTYAHNPSFMVHEV 734
AV + ++CNP+T Q T +GYDP+ DQ+KAL H + + H+V
Sbjct: 175 AVEGK---VMCNPNTEQFTTL--PVGTIFVGYDPIDDQYKALGFDFDKRCHG-NAIGHKV 228
Query: 735 KRLGRGGIVSRTQVTSPPYHPITRGR-CINGFMYYGA 842
LG G + + + PY PI CING +YYGA
Sbjct: 229 WTLGGGEGMRQIRGDLAPYRPILLPNVCINGVIYYGA 265
>TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 400
Score = 121 bits (301), Expect = 1e-027
Identities = 67/131 (51%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAKPPRFTVTFTNSVF 407
+P+D+ VE L RLP KSLM+F CVSK WSS+I +Q F+ S+Y ++ PRF V F+N F
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSF 68
Query: 408 --SEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFG-GYKYSSVHGFMAVNDRLKF 578
+ KRLFIFS E SSSS++ NLD TIPS+T+ + SV+GF+A + +F
Sbjct: 69 PSDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSLYTRF 128
Query: 579 IICNPSTGQVI 611
ICNPST QVI
Sbjct: 129 TICNPSTRQVI 139
>TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 390
Score = 85 bits (208), Expect = 6e-017
Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Frame = +3
Query: 237 PYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTFTNSVFSEP 416
P D+ E L+RLP KS++RF CVSK WSS+I F+ +Y R ++ F F +
Sbjct: 26 PLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLF---CFKQS 82
Query: 417 KRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFG-GYKYSSVHGFMAVNDRLKFIICNP 593
+LF+FS + S+SS A +D + F SVHG + + I+ NP
Sbjct: 83 DKLFVFSIPKHHYDSNSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICFHVLATVIVWNP 142
Query: 594 STGQVITF-----HCKATDTCLGYDPVGDQFKALTLLTSTYAHNPSFMVHEVKRLGRGGI 758
S Q +T K LGYDP+ + K + L N + +V LG
Sbjct: 143 SMRQFLTLPKPRKSWKELTVFLGYDPIEGKHKVVCL-----PRNRTCDECQVLTLGSAQK 197
Query: 759 VSRTQVTSPPYHPI--TRGRCINGFMYYGASV 848
RT T + T GRCI G +YY A V
Sbjct: 198 SWRTVKTKHKHRSTNDTWGRCIKGVVYYIAYV 229
>TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 391
Score = 83 bits (203), Expect = 2e-016
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTFTNSVFSE 413
+P +M ++ LIRLP KSLMRF CVSK W SLI S+ F ++ P + ++
Sbjct: 27 IPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDRENQ 86
Query: 414 PKRLFIFSGEEEVTSSSSSLVANLDM--TIPSVTMPFGGYKYSSVHGFMAVNDRLKFIIC 587
K L + S S + V+ +D TIP + GGY ++ G + + +C
Sbjct: 87 SKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIM----GGYLVNAARGLLCYRTGRRVKVC 142
Query: 588 NPSTGQVITFHCKATDT----CLGYDPVGDQFKALTL 686
NPST Q++ + T G+DP D++K L+L
Sbjct: 143 NPSTRQIVELPIMRSKTNVWNWFGHDPFHDEYKVLSL 179
>TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein |
chr3:17358591-17359765 FORWARD
Length = 361
Score = 77 bits (189), Expect = 9e-015
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Frame = +3
Query: 225 QVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY----AAKPPRFTVTF 392
Q+ +P D+++ L+RLP KSL+RF CVSK W S+I S F ++ ++ PPR + F
Sbjct: 9 QIYIPLDLQINILLRLPVKSLLRFRCVSKLWCSIITSHDFRNRHFNITSSSAPPRLLIAF 68
Query: 393 TNSVFSEPKRLFIFSGEEEVTSSSSS--LVANLDMTIPSVTMPFGGYKYSSVHGFMAVND 566
+ F K L + S V+SSS+S V D++ + G Y++V G
Sbjct: 69 QD--FYGEKLLLVSSPNPNVSSSSTSSCCVPYKDLSKVEIN---GRKVYNAVWGLTCFES 123
Query: 567 RLKFIICNPSTGQVITF 617
RLK ICNPST ++ F
Sbjct: 124 RLKVGICNPSTRELHMF 140
>TAIR9_protein||AT5G22791.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: F-box family protein
(TAIR:AT1G30790.1). | chr5:7603579-7604771 REVERSE
Length = 356
Score = 73 bits (178), Expect = 2e-013
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTFTNSVFSE 413
+P+D+ +E + RLP K ++RF VSK W S IRS+ F S+ R + FT F
Sbjct: 22 IPFDLTLEIVSRLPAKPIIRFQAVSKLWFSTIRSKNFTDSFLTRSKTRPRLFFTFKHFDS 81
Query: 414 PKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFIICNP 593
KR + E + SS++VA DMTI V + V+G +CNP
Sbjct: 82 RKRFIFSAPERDNNDKSSTVVARHDMTISDVAY----IRSLPVNGLFCYTRGDSIAVCNP 137
Query: 594 STGQVI 611
+T Q++
Sbjct: 138 TTRQIV 143
>TAIR9_protein||AT2G40910.2 | Symbols: | F-box protein-related |
chr2:17069938-17071501 REVERSE
Length = 443
Score = 68 bits (165), Expect = 6e-012
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 40/231 (17%)
Frame = +3
Query: 204 SRPGKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAA----KP 371
+R +K +P D+ +E ++RLP KS++RF C+SK WSSLI + F S + + K
Sbjct: 52 TRERRKYTCEIPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQ 111
Query: 372 PRFTVTFTNSVFSEPKRLFIFSGEEEVTSSSSS------LVANLDMTIPSVTMPFGGYKY 533
P + + G+ + S SS+ V + D+++ + GG+
Sbjct: 112 PHIHMCLVD-----------HGGQRVLLSLSSTSPDNTCYVVDQDLSLTGM----GGFFL 156
Query: 534 SSVHGFMAVNDRLKFIICNPSTGQVITFHCKATDTC------------LGYDPVGDQFKA 677
+ V G + + R K I NP+T Q +T +D +G+DPV DQ+K
Sbjct: 157 NLVRGLLCFSVREKACIYNPTTRQRLTLPAIKSDIIALKDERKDIRYYIGHDPVNDQYKL 216
Query: 678 L-TLLTSTYAHNPSFMVHEVKRLGRGGI--VSRTQVTSPPYHPITRGRCIN 821
+ T+ S+ H V L GG RT + P+ P T G+ IN
Sbjct: 217 VCTIGISSAFFTNLKSEHWVFVLEAGGSWRKVRTLESYHPHAPSTVGQFIN 267
>TAIR9_protein||AT2G40910.1 | Symbols: | F-box protein-related |
chr2:17069938-17071554 REVERSE
Length = 450
Score = 68 bits (165), Expect = 6e-012
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 40/231 (17%)
Frame = +3
Query: 204 SRPGKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAA----KP 371
+R +K +P D+ +E ++RLP KS++RF C+SK WSSLI + F S + + K
Sbjct: 59 TRERRKYTCEIPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQ 118
Query: 372 PRFTVTFTNSVFSEPKRLFIFSGEEEVTSSSSS------LVANLDMTIPSVTMPFGGYKY 533
P + + G+ + S SS+ V + D+++ + GG+
Sbjct: 119 PHIHMCLVD-----------HGGQRVLLSLSSTSPDNTCYVVDQDLSLTGM----GGFFL 163
Query: 534 SSVHGFMAVNDRLKFIICNPSTGQVITFHCKATDTC------------LGYDPVGDQFKA 677
+ V G + + R K I NP+T Q +T +D +G+DPV DQ+K
Sbjct: 164 NLVRGLLCFSVREKACIYNPTTRQRLTLPAIKSDIIALKDERKDIRYYIGHDPVNDQYKL 223
Query: 678 L-TLLTSTYAHNPSFMVHEVKRLGRGGI--VSRTQVTSPPYHPITRGRCIN 821
+ T+ S+ H V L GG RT + P+ P T G+ IN
Sbjct: 224 VCTIGISSAFFTNLKSEHWVFVLEAGGSWRKVRTLESYHPHAPSTVGQFIN 274
>TAIR9_protein||AT2G16810.1 | Symbols: | F-box family protein (FBX8) |
chr2:7287944-7288831 REVERSE
Length = 296
Score = 67 bits (163), Expect = 1e-011
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 22/199 (11%)
Frame = +3
Query: 147 KSDQKEICDSRDKGVGSDKSRPGKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSL 326
K K +R + K P + +P D+ +E L RLP KS+MRF CVSK WSSL
Sbjct: 12 KERMKRRSRTRSRSRRRAKQDPKTWVARYIPQDLLIEILTRLPPKSVMRFKCVSKFWSSL 71
Query: 327 IRSQRFVASY--YAAKPPRFTVTFTNSVFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIP 500
+ S+ F + ++P ++ K L + S ++S S V + D+TI
Sbjct: 72 LSSRYFCNRFLIVPSQPQPSLYMCLLDRYNYSKSLILSSAP---STSPYSFVFDQDLTIR 128
Query: 501 SVTMPFGGYKYSSVHGFMAVNDRLKFIICNPSTGQ-VITFHCKATDTCLG---------- 647
+ GG+ + GF+ LK I NP+T Q VI K +D G
Sbjct: 129 KM----GGFFLRILRGFIFFTRNLKARIYNPTTRQLVILPTIKESDIIAGPPYNILYFIC 184
Query: 648 YDPVGDQFKALTLLTSTYA 704
+DPV D++K L T +YA
Sbjct: 185 HDPVNDRYK--LLCTVSYA 201
>TAIR9_protein||AT1G30780.1 | Symbols: | F-box family protein |
chr1:10923919-10926561 REVERSE
Length = 483
Score = 67 bits (162), Expect = 1e-011
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Frame = +3
Query: 12 RLELRVSSGASIMKGKEHEKGSRSILEPIPLDLK----KKMDRLTRSPAKSDQKEICDSR 179
R+E VSSG ++ KGK+ S L+P P+DLK RL + + + E+C
Sbjct: 162 RVEFWVSSGTAV-KGKDRFCNRPSKLDPNPVDLKTVRLPSKFRLKKLLCRVESSEVC--- 217
Query: 180 DKGVGSDKSRPGKKLQV-ILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASY 356
G G++K ++ + LP+D+++ L RL KSL F VSK WSS+I SQRF+ S+
Sbjct: 218 -FGDGNEKDTNPSEIDLDSLPFDLKMVILTRLSAKSLTNFKRVSKMWSSIIGSQRFIDSF 276
Query: 357 YA-----AKPPRFTV 386
+ ++ P+F V
Sbjct: 277 FTMSSKQSRCPKFPV 291
>TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 303
Score = 66 bits (160), Expect = 2e-011
Identities = 70/254 (27%), Positives = 101/254 (39%), Gaps = 32/254 (12%)
Frame = +3
Query: 129 LTRSPAKSDQKEICDSRDKGVGSDKSRPGKKL-QVILPYDMEVETLIRLPGKSLMRFLCV 305
+ R +++ K S + + K G+K V +P D+ VE L +LP KSL+RF CV
Sbjct: 1 MKRGNEENNHKTSSSSSTQRLSRRKISAGEKSGNVNIPLDLTVEILKKLPAKSLLRFQCV 60
Query: 306 SKTWSSLIRSQR-----FVASYYAAKPPR-FTVTFTNSVFSEPKRLFIFSGEEEVTSSSS 467
SK W S+I S+R V PPR + F + V FIFS +
Sbjct: 61 SKQWLSIISSRRDFIDSIVTRSLTQPPPRDIKLIFHHQVLYPGPHFFIFSSTYPQNTDKE 120
Query: 468 SLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFI--ICNPSTGQVITF----HCKA 629
SL Y V G + I NP+T Q T +
Sbjct: 121 SLTTRAS-------------SYHYVRGLICCWSHCPTTVDIYNPTTRQYYTVPDTNRYQY 167
Query: 630 TDTC-LGYDPVGDQFKALTLLTSTYAHNPSFMVHEVKRLGRGGIVSRTQVTSPPYHPITR 806
+TC GYDPV +Q+K + L +P +V +G + H + +
Sbjct: 168 IETCFFGYDPVENQYKVMVLPKYYMEESPC----QVFTVGDPIEKPWRDIQGIGVHFLLK 223
Query: 807 GR-CINGFMYYGAS 845
CING +YY A+
Sbjct: 224 DAVCINGVIYYQAT 237
>TAIR9_protein||AT4G19940.1 | Symbols: | F-box family protein |
chr4:10806195-10807430 FORWARD
Length = 412
Score = 65 bits (157), Expect = 5e-011
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY-AAKPPRFTVTFTNSVFS 410
+P+D+ +E L RLP KSLMRF VSK WSSLI S+ F + PPR + ++S S
Sbjct: 35 IPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCLSSSDNS 94
Query: 411 EPKRLFI-FSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSV-HGFMAVNDRLKFII 584
K + + S + + SS V + D+T+P + GY+ S V G M + + I
Sbjct: 95 HLKTVLLSLSSPPDSDITMSSSVIDQDLTMPGMK----GYQISHVFRGLMCLVKKSSAQI 150
Query: 585 CNPSTGQVI 611
N +T Q++
Sbjct: 151 YNTTTRQLV 159
>TAIR9_protein||AT1G70960.1 | Symbols: | F-box family protein |
chr1:26756253-26757362 FORWARD
Length = 370
Score = 62 bits (149), Expect = 4e-010
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASY--YAAKPPR--FTVTFTNS 401
LP M++E L R+P K LM+F+CVSK W+S+IR + F Y + K PR F +
Sbjct: 9 LPRHMQMEILSRVPLKFLMKFMCVSKKWASIIRGEEFREDYLFQSMKRPRVLFVIDHREY 68
Query: 402 VFSEPKRLF--IFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLK 575
+ +P+ F ++ ++ + S + + + V P G +G K
Sbjct: 69 LPIKPEAFFHSVYQEDQPLLLSGKQRMRTFETPLVQVFQPIRGLICQQGYG--------K 120
Query: 576 FIICNP------STGQVITFHCKATDTCLGYDPVGDQFKALTL 686
+ICNP S Q+ T GYD D FK L +
Sbjct: 121 IVICNPGLKKFRSLPQIKVHKGAPMRTFFGYDEDKDVFKVLCI 163
>TAIR9_protein||AT4G19930.1 | Symbols: | F-box family protein |
chr4:10803558-10804853 FORWARD
Length = 432
Score = 62 bits (149), Expect = 4e-010
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRF------TVTF- 392
+P+D+ +E L RLP KSLMRF VSK WSSLI S+ F + + P F T+TF
Sbjct: 43 IPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRTF--TNRLLRVPSFIQRLYVTLTFL 100
Query: 393 TNSVFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRL 572
NS+ + K L S S+ SS V + D+T PS+ G Y + G M
Sbjct: 101 DNSLQRKSKLLSSSSSPGSDISTMSSFVVDRDLTTPSMK---GYYLSHVLRGLMCFVKEP 157
Query: 573 KFIICNPSTGQVI 611
I N +T Q++
Sbjct: 158 SVKIYNTTTRQLV 170
>TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein |
chr5:25156326-25157465 REVERSE
Length = 380
Score = 62 bits (148), Expect = 5e-010
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAK----PPRFTVTFTNS 401
+P D+ +E L +LP KSLMRF CVSK WSSLIRS+ F Y K PPR ++ +
Sbjct: 41 IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDH 100
Query: 402 VFSEPKRLFIFSGEEEVTSSSSS 470
+ + + E + SSSSS
Sbjct: 101 LLCNSLMVCHYPCESVLLSSSSS 123
>TAIR9_protein||AT5G44220.1 | Symbols: | F-box family protein |
chr5:17810477-17811364 FORWARD
Length = 296
Score = 55 bits (132), Expect = 4e-008
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +3
Query: 231 ILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY---AAKPPRFTVTFTNS 401
+LP D+ E L RLP K+L RFLCVSK WSS+IRS+ + + +A+P R TF
Sbjct: 61 LLPMDLIKEILKRLPAKTLARFLCVSKLWSSIIRSRDLMKLFLTESSARPGRLFFTFRRK 120
Query: 402 VFSEPKRLFIFSGEE 446
F+FS EE
Sbjct: 121 -----DDCFLFSSEE 130
>TAIR9_protein||AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE
Length = 421
Score = 55 bits (131), Expect = 5e-008
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +3
Query: 234 LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPP 374
+P D+ +E L RLP KSLMRF CVSK WSSLIRS+ F Y P
Sbjct: 44 IPLDLLIEILTRLPHKSLMRFKCVSKQWSSLIRSRFFSNRYLTVASP 90
>TAIR9_protein||AT1G47800.1 | Symbols: | F-box family protein |
chr1:17601513-17602676 FORWARD
Length = 388
Score = 55 bits (130), Expect = 6e-008
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +3
Query: 216 KKLQVI--LPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA----AKPPR 377
K LQ + +P D+ E L++LP KS+ RFLCVSK W+++IR + F+ S+ + K PR
Sbjct: 6 KNLQSLDHIPIDVLFEILVKLPAKSVARFLCVSKVWATMIRGEVFIRSFTSYSSPQKQPR 65
Query: 378 FTVTFTNSVFSEPKRLFIFS 437
+ + K L+ FS
Sbjct: 66 LLFALVDCLRLYNKMLYFFS 85
>TAIR9_protein||AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: F-box family protein
(TAIR:AT5G52610.1); Has 1084 Blast hits to 1065 proteins in 39 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1084;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:6614162-6615214 REVERSE
Length = 351
Score = 51 bits (120), Expect = 9e-007
Identities = 41/100 (41%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Frame = +3
Query: 231 ILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPR-----FTVTFT 395
++P D VE L+RLP KSL RFLCVSK S+IRS+ F+ Y + R F T
Sbjct: 1 MIPEDPLVEILLRLPVKSLARFLCVSKRCYSIIRSRHFINLYQSRASTRESRVMFAFRDT 60
Query: 396 NSVFSEPKRLFIFSGEEEVTSSSSSLVANLDMTIPSVTMP 515
N+ F R FS S S V N+D T S MP
Sbjct: 61 NTFF----RWNFFS-----LSQPPSSVTNIDST--SYCMP 89
>TAIR9_protein||AT1G47730.1 | Symbols: | F-box family protein |
chr1:17563931-17565106 REVERSE
Length = 392
Score = 50 bits (119), Expect = 1e-006
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Frame = +3
Query: 171 DSRDKGVGSDKSRPGKKLQVILPYDMEVETLIRLPGKSLMRFLCVSKTWSSLIRSQRFVA 350
+ + + + +SR GK LP D+ E RLP KS++RF CVSK WSS+ + F
Sbjct: 5 EEKTENIQRKRSR-GKSSSSSLPLDLTSEIFSRLPAKSVVRFRCVSKLWSSITTAPYFTN 63
Query: 351 SYYAAKPPRFTVTFTNSVFSEPKRLFIF-------SGEEEVTSSSSSLVANLDMTIP 500
S+ F F E + F+F + E + SSS ++ + T P
Sbjct: 64 SFETRPNLMF-------FFKEGDKFFVFTIPQHNQNPNESYSYSSSEIIDSYHTTYP 113
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|
