BLASTX 7.6.2
Query= UN82372 /QuerySize=583
(582 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PR... 256 1e-068
TAIR9_protein||AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/... 236 9e-063
TAIR9_protein||AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PR... 162 2e-040
TAIR9_protein||AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PR... 134 4e-032
>TAIR9_protein||AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PROTEINE 2);
ubiquitin-protein ligase | chr3:18572788-18574356 FORWARD
Length = 523
Score = 256 bits (652), Expect = 1e-068
Identities = 140/190 (73%), Positives = 151/190 (79%), Gaps = 6/190 (3%)
Frame = -1
Query: 582 CLLLQELVLIGVDATHASLSAIASNCKKLERLALCGSGAIGDVEMACIAEKCVALRKFCI 403
CL LQELVLIGVDAT+ SLSAIASNCKKLERLALCGSG IGD E+ CIAEKCV LRKFCI
Sbjct: 334 CLNLQELVLIGVDATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCIAEKCVTLRKFCI 393
Query: 402 KGCPVTDVGIKALALGCPNLVKLKVKKCIVVTGDVREWLRERRRTLVVSMDGDETKGQVM 223
KGC ++DVG++ALALGCP LVKLKVKKC +VTG+VREWLRERR TLVVSMD DET G +
Sbjct: 394 KGCLISDVGVQALALGCPKLVKLKVKKCSLVTGEVREWLRERRMTLVVSMDDDETNG--V 451
Query: 222 GSEDGGGG--LETVVEEVLTPVADGGGDGEVAGGGGGRLAMLKTK--LLASKNFVAFTLR 55
G DGG LETVVEE PV DG G VAGGG LA+LKTK LLA +N VA TLR
Sbjct: 452 GLVDGGDQRVLETVVEEEAPPVIDGDGGLGVAGGGRLGLAILKTKLGLLAGRNLVACTLR 511
Query: 54 RWLLSEAASS 25
RW SEA SS
Sbjct: 512 RWSQSEATSS 521
>TAIR9_protein||AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/ASK1
INTERACTING PROTEIN 2); ubiquitin-protein ligase |
chr5:26831677-26833260 REVERSE
Length = 528
Score = 236 bits (601), Expect = 9e-063
Identities = 129/193 (66%), Positives = 150/193 (77%), Gaps = 12/193 (6%)
Frame = -1
Query: 582 CLLLQELVLIGVDATHASLSAIASNCKKLERLALCGSGAIGDVEMACIAEKCVALRKFCI 403
CL LQELVLIGV+ATH SL+AIASNC+KLERLALCGSG IGD E+ACIA KC ALRKFCI
Sbjct: 340 CLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCI 399
Query: 402 KGCPVTDVGIKALALGCPNLVKLKVKKCIVVTGDVREWLRERRRTLVVSMDGDETKGQVM 223
KGCPV+D GI+ALA+GCPNLVKLKVKKC VVTG++ +WLRE+RRTLVVSMDGDET+ V+
Sbjct: 400 KGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGDWLREQRRTLVVSMDGDETEAVVV 459
Query: 222 GSEDGGGGLETVVEEVLTPVADGGG----DGEVAGGGGGRLAMLKTKL--LASKNFVAFT 61
G +ETVVEE VA GG G GGGG RLAM+++KL LA +N V T
Sbjct: 460 VD----GEVETVVEE--PRVAQAGGIVAEIGSSNGGGGSRLAMIRSKLGFLAGRNLVTCT 513
Query: 60 LRRWLLSEAASST 22
RRW ++ ASS+
Sbjct: 514 FRRWSHNDNASSS 526
>TAIR9_protein||AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PROTEINE 3);
ubiquitin-protein ligase | chr4:4197847-4199511 REVERSE
Length = 555
Score = 162 bits (409), Expect = 2e-040
Identities = 96/179 (53%), Positives = 113/179 (63%), Gaps = 5/179 (2%)
Frame = -1
Query: 582 CLLLQELVLIGVDATHASLSAIASNCKKLERLALCGSGAIGDVEMACIAEKCVALRKFCI 403
C LQELVLIGV+ T SL AI SNC LERLALCGS +GD E+ CIAEKC+ALRK CI
Sbjct: 369 CWNLQELVLIGVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCI 428
Query: 402 KGCPVTDVGIKALALGCPNLVKLKVKKCIVVTGDVREWLRERRRTLVVSMDGDETKGQVM 223
K CP+TD GIKAL GCPNL+K+KVKKC VT + LR+RR LVV++D ET V
Sbjct: 429 KNCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRALLVVNLDAPETP-IVE 487
Query: 222 GSEDGGGGLETVVEEVLTPVADGGGDGEVAGGGGGRLAMLKTKL--LASKNFVAFTLRR 52
GS GG E VE P +A G R + K +L L+ +NFV+ LRR
Sbjct: 488 GSVGEGGAQENAVE--FPPSRLQIPTIGLASGSTSRSSSFKLRLGFLSQRNFVSCALRR 544
>TAIR9_protein||AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PROTEINE 1);
ubiquitin-protein ligase | chr1:17276103-17277659 REVERSE
Length = 519
Score = 134 bits (337), Expect = 4e-032
Identities = 69/128 (53%), Positives = 83/128 (64%)
Frame = -1
Query: 582 CLLLQELVLIGVDATHASLSAIASNCKKLERLALCGSGAIGDVEMACIAEKCVALRKFCI 403
C LQELVLIGV+ T SL +A+ C LERLALCG GD E++CIA KC ALRK CI
Sbjct: 336 CSQLQELVLIGVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCI 395
Query: 402 KGCPVTDVGIKALALGCPNLVKLKVKKCIVVTGDVREWLRERRRTLVVSMDGDETKGQVM 223
K CP++DVGI+ LA GCP L K+K+KKC V G +WLR R L V+ D E + +
Sbjct: 396 KNCPISDVGIENLANGCPGLTKVKIKKCKGVLGGCADWLRTVRPMLSVNADTMEQEHEEA 455
Query: 222 GSEDGGGG 199
S D GG
Sbjct: 456 ASNDVVGG 463
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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