BLASTX 7.6.2
Query= UN82389 /QuerySize=833
(832 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 209 3e-054
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 205 4e-053
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 178 6e-045
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 146 2e-035
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 146 3e-035
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 117 8e-027
TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat fam... 114 7e-026
TAIR9_protein||AT3G22800.1 | Symbols: | leucine-rich repeat fam... 114 9e-026
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 110 2e-024
TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY O... 108 6e-024
TAIR9_protein||AT4G36230.1 | Symbols: | unknown protein | chr4:... 104 9e-023
TAIR9_protein||AT3G23450.1 | Symbols: | unknown protein | chr3:... 104 1e-022
TAIR9_protein||AT2G32690.1 | Symbols: ATGRP23, GRP23 | GRP23 (GL... 101 1e-021
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 209 bits (530), Expect = 3e-054
Identities = 108/139 (77%), Positives = 112/139 (80%), Gaps = 7/139 (5%)
Frame = -1
Query: 583 D*QIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRTITVNEAQSRGS-GGGGG 407
D +IINDRE+GRSRGFGFVTFKDEK+MRDAIEEMNGKELDGR ITVNEAQSRGS GGGGG
Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSGGGGGG 93
Query: 406 RG--GGGYGGRGGGGY-GGGGGGYGDRRSGGYGSGGGG-GRGYGGGGGGYGGGGRRDGGG 239
RG GGGY GGGGY GGGGGGY GGY GG G G GGGG GYGGGGRR+GGG
Sbjct: 94 RGGSGGGYRSGGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGG 153
Query: 238 YGGGDGAYGGSGGGGGGW* 182
YGGGDG G GGGGGGW*
Sbjct: 154 YGGGDG--GSYGGGGGGW* 170
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 205 bits (520), Expect = 4e-053
Identities = 104/150 (69%), Positives = 111/150 (74%), Gaps = 10/150 (6%)
Frame = -1
Query: 601 FADY--CFD*QIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRTITVNEAQSR 428
FA Y D +IINDRETGRSRGFGFVTFKDEK+M+DAIE MNG++LDGR+ITVNEAQSR
Sbjct: 28 FAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSR 87
Query: 427 GSGGGGGR---GGGGYGGRGGGGYGGGGGGY---GDRR--SGGYGSGGGGGRGYGGGGGG 272
GSGGGGG GGGGY GGGGY GGGG Y G RR GGY GGGG GGGGG
Sbjct: 88 GSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGS 147
Query: 271 YGGGGRRDGGGYGGGDGAYGGSGGGGGGW* 182
YGGG R GGGYGGG+G G GGGGGW*
Sbjct: 148 YGGGRREGGGGYGGGEGGGYGGSGGGGGW* 177
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 178 bits (449), Expect = 6e-045
Identities = 97/138 (70%), Positives = 104/138 (75%), Gaps = 15/138 (10%)
Frame = -1
Query: 601 FADY--CFD*QIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRTITVNEAQSR 428
FA Y D +IINDRETGRSRGFGFVTFKDEK+M+DAIE MNG++LDGR+ITVNEAQSR
Sbjct: 28 FAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSR 87
Query: 427 GSGGGGG-RGGGGYGG-----RGGGGYGGGGGGYGDRRSGGYGSGGGGGRGYGGGGGGYG 266
GSGGGGG RGGG YGG GGGGY GGGGGY R GG GS GGG R GGGGYG
Sbjct: 88 GSGGGGGHRGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGG-GSYGGGRR---EGGGGYG 143
Query: 265 GGGRRDGGGYGGGDGAYG 212
GG +GGGYGG G G
Sbjct: 144 GG---EGGGYGGSGGGGG 158
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 146 bits (367), Expect = 2e-035
Identities = 73/94 (77%), Positives = 76/94 (80%), Gaps = 4/94 (4%)
Frame = -1
Query: 583 D*QIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRTITVNEAQSRGSGGGGGR 404
D +IINDRE+GRSRGFGFVTFKDEK+MRDAIEEMNGKELDGR ITVNEAQSRGSGG
Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSGG---- 89
Query: 403 GGGGYGGRGGGGYGGGGGGYGDRRSGGYGSGGGG 302
GGGG GG GGG GGGGGY GGY GGGG
Sbjct: 90 GGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGG 123
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 146 bits (366), Expect = 3e-035
Identities = 79/140 (56%), Positives = 91/140 (65%), Gaps = 14/140 (10%)
Frame = -1
Query: 583 D*QIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRTITVNEAQSRGSG---GG 413
D ++I DRETGRSRGFGFVTF ++ AI+ ++G++L GR + VN A R SG GG
Sbjct: 68 DTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRTSGGGFGG 127
Query: 412 GGRGGGGYGGRGGGGYGGGGGGYGDRRSGGYGSGGGG-----GRGYGG-GGGGYGGGGRR 251
GG GGGG G G GGYGGG GGYG SGGYG G GG G GYGG GGYGG G
Sbjct: 128 GGYGGGGGGYGGSGGYGGGAGGYGG--SGGYGGGAGGYGGNSGGGYGGNAAGGYGGSG-- 183
Query: 250 DGGGYGGGDGAYGGSGGGGG 191
GGYGG +GG+GGG G
Sbjct: 184 -AGGYGGDATGHGGAGGGYG 202
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 117 bits (293), Expect = 8e-027
Identities = 62/97 (63%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Frame = -1
Query: 583 D*QIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRTITVNEAQSRGSGGGGGR 404
D ++I DRETGRSRGFGFV F DE + AI EM+GKEL+GR I VN A R S
Sbjct: 63 DAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPRAYG 122
Query: 403 GGGGYGGRGGGGYGGGGGGYGDRRSGGYGSGGGGGRG 293
GGGGY G GGGGYGGGGGGYG GGYG GG GG G
Sbjct: 123 GGGGYSG-GGGGYGGGGGGYGG-GGGGYGGGGDGGGG 157
>TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat family protein /
extensin family protein | chr4:7758610-7760892 FORWARD
Length = 761
Score = 114 bits (285), Expect = 7e-026
Identities = 53/84 (63%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Frame = +3
Query: 189 PPPPPPLPP--*APSPPP*PPPSRLPPPP*PPPPPP---YPRPPPPPDP*PPLRLSPYPP 353
PPPP P PP P PPP PPP PPPP PPPPPP P PPPPP P PP SP PP
Sbjct: 426 PPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPP 485
Query: 354 PPPPYPPPPRPPYPPPPRPPPPPL 425
PPP PPP P PPPP PPPPP+
Sbjct: 486 SPPPPPPPVYSPPPPPPPPPPPPV 509
Score = 114 bits (283), Expect = 1e-025
Identities = 53/84 (63%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Frame = +3
Query: 183 YQPPPPPPLPP*APSPPP*PPPSRLPPPP*PPPPPPYPRPPPPPDP*PPLRLSPYPPPPP 362
Y PPPPPP PP SPPP PPP PPPP PPPP P PPPPP P SP PPPPP
Sbjct: 436 YSPPPPPPPPPPVYSPPPPPPPP--PPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPP 493
Query: 363 PYPPPPRPPYPPPP---RPPPPPL 425
Y PPP PP PPPP PPPPP+
Sbjct: 494 VYSPPPPPPPPPPPPVYSPPPPPV 517
Score = 113 bits (282), Expect = 1e-025
Identities = 54/86 (62%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = +3
Query: 189 PPPPPPL---PP*APSPPP--*PPPSRLPPPP*PPPPPPYPRPPPPPDP*PPLRLSPYPP 353
PPPP P+ PP SPPP PPP PPPP PPPPP Y PPPPP P PP SP PP
Sbjct: 410 PPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSP-PP 468
Query: 354 PPPPYPPPPRPPYPPPPRPPPPPLPL 431
PPPP PPPP PPPP PPPPP P+
Sbjct: 469 PPPPPPPPPPVYSPPPPSPPPPPPPV 494
>TAIR9_protein||AT3G22800.1 | Symbols: | leucine-rich repeat family protein /
extensin family protein | chr3:8063063-8064475 REVERSE
Length = 471
Score = 114 bits (284), Expect = 9e-026
Identities = 53/82 (64%), Gaps = 6/82 (7%)
Frame = +3
Query: 189 PPPPPPLPP*APSPPP*PPPSRLPPPP*PPPPPPYPRPPPPPDP*PPLRLSPYPPPPPP- 365
PP PPP PP P PPP PPP PPPP PPPP YP PPPPP PP YPPPPPP
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPY---VYPPPPPPY 432
Query: 366 -YPPPPRPPYPPPPRPPPPPLP 428
YPPPP PPY PP PPP P P
Sbjct: 433 VYPPPPSPPYVYPP-PPPSPQP 453
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 110 bits (273), Expect = 2e-024
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -1
Query: 583 D*QIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRTITVNEAQSRGSGGGG 410
D +IINDRE+GRSRGFGFVTFKDEK+MRDAIEEMNGKELDGR ITVNEAQSRGSGGGG
Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSGGGG 91
>TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY ORGANIZED
TRIBUTARIES 1) | chr2:15165468-15166235 FORWARD
Length = 256
Score = 108 bits (268), Expect = 6e-024
Identities = 58/96 (60%), Positives = 61/96 (63%), Gaps = 16/96 (16%)
Frame = -1
Query: 427 GSGGGGGRGGGGYGGRG---GGGYG-----GGGGGYGDRRSGGYGSGGGGGRGYGGG--- 281
G GGGGG GGG GG G GGGYG GGG GYG +GG+G GGGGG G GGG
Sbjct: 81 GGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGAGGGGGGGG 140
Query: 280 ---GGGYGGG-GRRDGGGYGGGD-GAYGGSGGGGGG 188
GGGYGGG G GGGYGGG G +GG GGGG G
Sbjct: 141 GAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNG 176
Score = 102 bits (252), Expect = 4e-022
Identities = 50/83 (60%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = -1
Query: 427 GSGGGGGRGG---GGYGGRGGGGYGGGGGGYGDRRSGGYGSGGGGGRGYGGGGGGYGGGG 257
G GGG G GG GG+GG GGGG GGGGGG G GGYG G G G G G GGGG GG G
Sbjct: 109 GEGGGAGYGGGEAGGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHG 168
Query: 256 RRDGGGYGGGDGAYGGSGGGGGG 188
GGG GGG G G GG GG
Sbjct: 169 GGGGGGNGGGGGGGSGEGGAHGG 191
>TAIR9_protein||AT4G36230.1 | Symbols: | unknown protein |
chr4:17145586-17146251 FORWARD
Length = 222
Score = 104 bits (258), Expect = 9e-023
Identities = 49/80 (61%), Positives = 50/80 (62%)
Frame = -1
Query: 427 GSGGGGGRGGGGYGGRGGGGYGGGGGGYGDRRSGGYGSGGGGGRGYGGGGGGYGGGGRRD 248
G GGGGG GGGG G GGGG G GG G + SGGGGG G GGGGG G GR
Sbjct: 93 GGGGGGGGGGGGQGSGGGGGEGNGGNGKDNSHKRNKSSGGGGGGGGGGGGGSGNGSGRGR 152
Query: 247 GGGYGGGDGAYGGSGGGGGG 188
GGG GGG G GG GGGGGG
Sbjct: 153 GGGGGGGGGGGGGGGGGGGG 172
>TAIR9_protein||AT3G23450.1 | Symbols: | unknown protein | chr3:8410483-8411841
FORWARD
Length = 453
Score = 104 bits (257), Expect = 1e-022
Identities = 54/98 (55%), Positives = 62/98 (63%), Gaps = 9/98 (9%)
Frame = -1
Query: 481 NGKELDGRTITVNEAQSRGSGGGGGRGGGGYGGRGGGGYGGGGGGYGDRRSGGYGSGGGG 302
+G++ D +T+ G G GGG GGG GG GGG GG GGG+G GG+G GGGG
Sbjct: 30 SGRDEDEKTLV-------GGGKGGGFGGGFGGGAGGGVGGGAGGGFGGGAGGGFGGGGGG 82
Query: 301 GRGYGGGGGGYGGGGRRDGGGYGGGDGAYGGSGGGGGG 188
G G GGGGGG GGG GGG+GGG G GG GGG GG
Sbjct: 83 GGGGGGGGGGGFGGGGGFGGGHGGGVG--GGVGGGHGG 118
>TAIR9_protein||AT2G32690.1 | Symbols: ATGRP23, GRP23 | GRP23 (GLYCINE-RICH
PROTEIN 23) | chr2:13863934-13864539 REVERSE
Length = 202
Score = 101 bits (249), Expect = 1e-021
Identities = 52/83 (62%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Frame = -1
Query: 427 GSGGGGGRGGGGYGGRGGGGYGGGGGGYGDRRSGGYGSGGGGGRGYG---GGGGGYGGGG 257
G GGG G GGGG G GGGG GGGGG G GGYG G GGG G G GGGGG+GGGG
Sbjct: 110 GLGGGSGLGGGGGLGGGGGGGLGGGGGLGGGAGGGYGGGAGGGLGGGGGIGGGGGFGGGG 169
Query: 256 RRDGGGYGGGDGAYGGSGGGGGG 188
GGG+GGG G G G GGGG
Sbjct: 170 ---GGGFGGGAGGGFGKGIGGGG 189
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|
