BLASTX 7.6.2
Query= UN82490 /QuerySize=733
(732 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G27830.1 | Symbols: RPL12-A, RPL12 | RPL12-A (... 253 8e-068
TAIR9_protein||AT3G27850.1 | Symbols: RPL12-C | RPL12-C (ribosom... 244 6e-065
TAIR9_protein||AT3G27840.1 | Symbols: RPL12-B | RPL12-B (ribosom... 204 7e-053
TAIR9_protein||AT4G37660.1 | Symbols: | ribosomal protein L12 f... 82 4e-016
TAIR9_protein||AT1G70190.1 | Symbols: | ribosomal protein L12 f... 72 2e-013
TAIR9_protein||AT3G06040.1 | Symbols: | ribosomal protein L12 f... 71 7e-013
TAIR9_protein||AT3G06040.2 | Symbols: | ribosomal protein L12 f... 71 7e-013
TAIR9_protein||AT3G06040.3 | Symbols: | ribosomal protein L12 f... 71 7e-013
TAIR9_protein||AT4G36420.1 | Symbols: | ribosomal protein L12 f... 71 7e-013
TAIR9_protein||AT2G03130.1 | Symbols: | ribosomal protein L12 f... 53 2e-007
>TAIR9_protein||AT3G27830.1 | Symbols: RPL12-A, RPL12 | RPL12-A (RIBOSOMAL
PROTEIN L12-A); structural constituent of ribosome |
chr3:10318576-10319151 FORWARD
Length = 192
Score = 253 bits (646), Expect = 8e-068
Identities = 140/170 (82%), Positives = 147/170 (86%), Gaps = 5/170 (2%)
Frame = +1
Query: 97 SRFPSHSPAFTFPSRFGSSPSTLL----THLCPIAAVEAREKIENIGSEISSLTLEEARV 264
+ FPS + FPSRFG S+ L THL PIAAVEA EKIE IGSEISSLTLEEAR+
Sbjct: 24 NHFPSRTTTIEFPSRFGGGSSSTLTHRATHLRPIAAVEAPEKIEKIGSEISSLTLEEARI 83
Query: 265 LVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDVVINEVPSNARIAVIKA 444
LVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VEEQTEFDVVINEVPS++RIAVIKA
Sbjct: 84 LVDYLQDKFGVSPLSLAPAAAAVAAPAD-GGAAAVVEEQTEFDVVINEVPSSSRIAVIKA 142
Query: 445 VRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEANAKVSIA* 594
VRALTSLALKEAKELIEGLPKKFKEG+TKDEAEEAKK LEEA AKVSIA*
Sbjct: 143 VRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEEAGAKVSIA* 192
>TAIR9_protein||AT3G27850.1 | Symbols: RPL12-C | RPL12-C (ribosomal protein
l12-c); structural constituent of ribosome | chr3:10324905-10325468
FORWARD
Length = 188
Score = 244 bits (621), Expect = 6e-065
Identities = 138/177 (77%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +1
Query: 64 RELDPLLFFPHSRFPSHSPAFTFPSRFGSSPSTLLTHLCPIAAVEAREKIENIGSEISSL 243
R PL F S A FP R SS S +L PI+AVEA EKIE IGSEISSL
Sbjct: 13 RSSSPLTSASTHHFLSKPTAIEFPFRLSSSSSHRAINLRPISAVEAPEKIEKIGSEISSL 72
Query: 244 TLEEARVLVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDVVINEVPSNA 423
TLEEAR+LVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VEEQTEFDVVINEVPS++
Sbjct: 73 TLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPAD-GGAAAVVEEQTEFDVVINEVPSSS 131
Query: 424 RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEANAKVSIA* 594
RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+TKDEAEEAKK LEEA AKVSIA*
Sbjct: 132 RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEEAGAKVSIA* 188
>TAIR9_protein||AT3G27840.1 | Symbols: RPL12-B | RPL12-B (ribosomal protein
l12-b); structural constituent of ribosome | chr3:10323354-10323935
FORWARD
Length = 194
Score = 204 bits (517), Expect = 7e-053
Identities = 112/168 (66%), Positives = 129/168 (76%), Gaps = 4/168 (2%)
Frame = +1
Query: 103 FPSHSPAFTFPSRFGSSPSTLLTH----LCPIAAVEAREKIENIGSEISSLTLEEARVLV 270
FPS + FP FG S S+ L+H L PI+AV+ +KI+ IGSEISSLTLEE+R+LV
Sbjct: 27 FPSRPLSIEFPFSFGVSSSSTLSHRAIYLHPISAVKTPKKIKKIGSEISSLTLEESRILV 86
Query: 271 DYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDVVINEVPSNARIAVIKAVR 450
DY+QDKFGVS L APAAAA+ P D GGA A+VE QT FDVVIN+VP RIAVI A+R
Sbjct: 87 DYVQDKFGVSILFSAPAAAALPPPLDNGGATASVERQTTFDVVINDVPRGNRIAVITAIR 146
Query: 451 ALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEANAKVSIA* 594
A+TSL+L E+KELIEG PKKFKEGVTKDEAEE K QLEEA AKVSI *
Sbjct: 147 AMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDKTQLEEAGAKVSIV* 194
>TAIR9_protein||AT4G37660.1 | Symbols: | ribosomal protein L12 family protein |
chr4:17695543-17696046 FORWARD
Length = 168
Score = 82 bits (200), Expect = 4e-016
Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 16/152 (10%)
Frame = +1
Query: 157 STLLTHLCPIAAVEAR-EKIENIGSEISSLTLEEARVLVDY---LQDKFGVSPLSLAPAA 324
S+ HLC +A+ EAR +K+E I ++ L E L DY K G++
Sbjct: 23 SSATRHLCAVASPEARTKKLERIADDLLKLNRIE---LYDYSLLFSHKIGLNRY-----G 74
Query: 325 AAVAAPGDGGGAAAAVE----EQTEFDVVINEVPSNARIAVIKAVRALTSLALKEAKELI 492
+AVA G G A+A+ E E+T FDV + + + ++I VIK +RA T L LKEAK L+
Sbjct: 75 SAVAVTGSVGDASASTETKTAEKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALV 134
Query: 493 EGLPKKFKEGVTKDEAEEAKKQLEEANAKVSI 588
E P K G+TK+EAE+ ++L+ A V++
Sbjct: 135 EKAPVIVKNGLTKEEAEKIMEKLKAVGAIVAL 166
>TAIR9_protein||AT1G70190.1 | Symbols: | ribosomal protein L12 family protein |
chr1:26430616-26431242 FORWARD
Length = 209
Score = 72 bits (176), Expect = 2e-013
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Frame = +1
Query: 205 EKIENIGSEISSLTLEEARVLVDYLQDKFGVSPLS----LAPAAAAVAAPGDGGGAAA-- 366
+++ + EISSLTL E L + K G++ L + P A G GGG +
Sbjct: 69 DRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPGAGGGVGVGGGGGMVSQS 128
Query: 367 -----AVEEQTEFDVVINEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTK 531
A E+T F++ + ++A+I +IK +R+ T L LKEAK L+E P K G++K
Sbjct: 129 GVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKALVEKTPAILKAGLSK 188
Query: 532 DEAEEAKKQLEEANAKV 582
+E E+ ++L+ AKV
Sbjct: 189 EEGEKILEKLKALGAKV 205
>TAIR9_protein||AT3G06040.1 | Symbols: | ribosomal protein L12 family protein |
chr3:1824516-1825076 REVERSE
Length = 187
Score = 71 bits (172), Expect = 7e-013
Identities = 41/113 (36%), Positives = 62/113 (54%)
Frame = +1
Query: 208 KIENIGSEISSLTLEEARVLVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTE 387
KI + I++L+ EE + + L + + + + A G G +E+T
Sbjct: 59 KIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAGNVEEKKEKTA 118
Query: 388 FDVVINEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEE 546
FDV + + ++ +I VIK VR TSL LKEAKEL+E +P K+GVTK+EA E
Sbjct: 119 FDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANE 171
>TAIR9_protein||AT3G06040.2 | Symbols: | ribosomal protein L12 family protein |
chr3:1824516-1825076 REVERSE
Length = 187
Score = 71 bits (172), Expect = 7e-013
Identities = 41/113 (36%), Positives = 62/113 (54%)
Frame = +1
Query: 208 KIENIGSEISSLTLEEARVLVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTE 387
KI + I++L+ EE + + L + + + + A G G +E+T
Sbjct: 59 KIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAGNVEEKKEKTA 118
Query: 388 FDVVINEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEE 546
FDV + + ++ +I VIK VR TSL LKEAKEL+E +P K+GVTK+EA E
Sbjct: 119 FDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANE 171
>TAIR9_protein||AT3G06040.3 | Symbols: | ribosomal protein L12 family protein |
chr3:1824516-1825076 REVERSE
Length = 187
Score = 71 bits (172), Expect = 7e-013
Identities = 41/113 (36%), Positives = 62/113 (54%)
Frame = +1
Query: 208 KIENIGSEISSLTLEEARVLVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTE 387
KI + I++L+ EE + + L + + + + A G G +E+T
Sbjct: 59 KIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAGNVEEKKEKTA 118
Query: 388 FDVVINEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEE 546
FDV + + ++ +I VIK VR TSL LKEAKEL+E +P K+GVTK+EA E
Sbjct: 119 FDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANE 171
>TAIR9_protein||AT4G36420.1 | Symbols: | ribosomal protein L12 family protein |
chr4:17203718-17204257 REVERSE
Length = 180
Score = 71 bits (172), Expect = 7e-013
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Frame = +1
Query: 124 FTFPSRFGSSPSTLLTHLCPIAAVEAREKIENIGSEISSLTLEE---ARVLVDYLQDKFG 294
FT SR SSP+T ++ I ++ N+ + + ++ L E ++ + L
Sbjct: 28 FTIQSRSYSSPATQSENVSKIV-----NELSNL-TLLETMDLTEILRQKLNISELPVMAA 81
Query: 295 VSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDVVINEVPSNARIAVIKAVRALTSLALK 474
+ P P + A + G G G E +T FDV++ + ++I VIK VR +T+L LK
Sbjct: 82 MMPGMSLPGSGASKSAG-GEGKEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLK 140
Query: 475 EAKELIEGLPKKFKEGVTKDEAEEAKKQLEEANAKVSI 588
EAK+L+E P K+GV+K+EAE+ ++L+ AKV++
Sbjct: 141 EAKDLVEKAPTLLKKGVSKEEAEKIIEKLKAVGAKVAM 178
>TAIR9_protein||AT2G03130.1 | Symbols: | ribosomal protein L12 family protein |
chr2:940744-941076 FORWARD
Length = 111
Score = 53 bits (126), Expect = 2e-007
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +1
Query: 331 VAAPGDGGGAA--AAVEEQTEFDVVINEVPSNARIAVIKAVRALTSLALKEAKELIEGLP 504
V G GG A A E+T F+V + + A+I +IK VR + + LKEA +L+ P
Sbjct: 3 VLRDGQSGGGANEGAKAEKTVFEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAP 62
Query: 505 KKFKEGVTKDEAEEAKKQLEEANAK 579
K G++K+E EE ++L A+
Sbjct: 63 TVLKTGLSKEEGEEVVEKLNALGAE 87
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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