BLASTX 7.6.2
Query= UN82554 /QuerySize=833
(832 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular... 66 3e-011
TAIR9_protein||AT4G18840.1 | Symbols: | pentatricopeptide (PPR)... 66 3e-011
TAIR9_protein||AT4G02750.1 | Symbols: | pentatricopeptide (PPR)... 65 6e-011
TAIR9_protein||AT1G14470.1 | Symbols: | pentatricopeptide (PPR)... 63 2e-010
TAIR9_protein||AT3G26540.1 | Symbols: | pentatricopeptide (PPR)... 63 2e-010
TAIR9_protein||AT1G62260.1 | Symbols: | pentatricopeptide (PPR)... 62 4e-010
TAIR9_protein||AT2G21090.1 | Symbols: | pentatricopeptide (PPR)... 62 4e-010
TAIR9_protein||AT4G37170.1 | Symbols: | pentatricopeptide (PPR)... 61 7e-010
TAIR9_protein||AT2G35030.1 | Symbols: | pentatricopeptide (PPR)... 59 3e-009
TAIR9_protein||AT1G08070.1 | Symbols: | pentatricopeptide (PPR)... 58 7e-009
TAIR9_protein||AT3G29230.1 | Symbols: | pentatricopeptide (PPR)... 58 7e-009
TAIR9_protein||AT3G22690.1 | Symbols: | pentatricopeptide (PPR)... 56 2e-008
TAIR9_protein||AT5G08510.1 | Symbols: | pentatricopeptide (PPR)... 56 2e-008
TAIR9_protein||AT1G09410.1 | Symbols: | pentatricopeptide (PPR)... 56 3e-008
TAIR9_protein||AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRA... 56 3e-008
TAIR9_protein||AT2G42920.1 | Symbols: | pentatricopeptide (PPR)... 56 3e-008
TAIR9_protein||AT3G03580.1 | Symbols: | pentatricopeptide (PPR)... 56 3e-008
>TAIR9_protein||AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis
thaliana protein match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793 proteins in
111 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 35; Plants
- 13298; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 475
Score = 66 bits (159), Expect = 3e-011
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Frame = -2
Query: 249 LINLHLRREDDDGLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMP 70
+IN +L +D LV ARR F+ + DI WN MIS Y++ G + EAR +FDQMP
Sbjct: 65 MINGYLLNKD---LVSARRYFD----LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP 117
Query: 69 VRDVVSWNTMLTG 31
RDV+SWNT+L G
Sbjct: 118 CRDVMSWNTVLEG 130
>TAIR9_protein||AT4G18840.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10338719-10340356 REVERSE
Length = 546
Score = 66 bits (159), Expect = 3e-011
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 9/75 (12%)
Frame = -2
Query: 255 NHLINLHLRREDDDGLV-EARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFD 79
N L++ +L + GLV EAR LF++ ++ +WN MIS Y GL+ EA++VFD
Sbjct: 210 NSLLSAYLEK----GLVDEARALFDE----MEERNVESWNFMISGYAAAGLVKEAKEVFD 261
Query: 78 QMPVRDVVSWNTMLT 34
MPVRDVVSWN M+T
Sbjct: 262 SMPVRDVVSWNAMVT 276
>TAIR9_protein||AT4G02750.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:1221116-1223461 REVERSE
Length = 782
Score = 65 bits (156), Expect = 6e-011
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = -2
Query: 204 EARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTGLK 25
EAR+LF+++ D+ TW AM+S Y+Q ++ EAR++FD+MP R+ VSWN ML G
Sbjct: 268 EARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV 323
Query: 24 KG 19
+G
Sbjct: 324 QG 325
Score = 57 bits (135), Expect = 2e-008
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -2
Query: 156 DISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTG 31
++STWN MI+ Y Q G ISEA+ +FD+MP RD VSW M+ G
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
>TAIR9_protein||AT1G14470.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:4954080-4955702 FORWARD
Length = 541
Score = 63 bits (152), Expect = 2e-010
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Frame = -2
Query: 249 LINLHLRREDDDGLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMP 70
L+++H + D + ARR+FN+ T ++ TWNAMIS Y + G +S AR++FD MP
Sbjct: 305 LLDMHAKCRD---IQSARRIFNE---LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 69 VRDVVSWNTMLTG 31
R+VVSWN+++ G
Sbjct: 359 KRNVVSWNSLIAG 371
Score = 55 bits (131), Expect = 5e-008
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Frame = -2
Query: 255 NHLINLHLRREDDDGLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQ 76
N +++++++ E + AR++F+Q + S WN MIS Y + G EA K+FD
Sbjct: 140 NVIMDMYVKHE---SVESARKVFDQ----ISQRKGSDWNVMISGYWKWGNKEEACKLFDM 192
Query: 75 MPVRDVVSWNTMLTGLKKGRD 13
MP DVVSW M+TG K +D
Sbjct: 193 MPENDVVSWTVMITGFAKVKD 213
>TAIR9_protein||AT3G26540.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:9744542-9746644 REVERSE
Length = 701
Score = 63 bits (152), Expect = 2e-010
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = -2
Query: 216 DGLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTML 37
D L ARR+F+Q R S D+ +W + +S Y GL EAR++FD MP R++VSWN ML
Sbjct: 312 DRLESARRVFDQTR----SKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAML 367
Query: 36 TGLKKGRDYPES 1
G ++ E+
Sbjct: 368 GGYVHAHEWDEA 379
>TAIR9_protein||AT1G62260.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:22997826-22999796 REVERSE
Length = 657
Score = 62 bits (149), Expect = 4e-010
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Frame = -2
Query: 210 LVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTG 31
+ EAR +F + T TWN MIS YV+R +++ARK+FD MP RDVV+WNTM++G
Sbjct: 56 IAEARDIFEKLEARNT----VTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
>TAIR9_protein||AT2G21090.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:9045695-9047488 REVERSE
Length = 598
Score = 62 bits (149), Expect = 4e-010
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 7/79 (8%)
Frame = -2
Query: 267 TATLNHLINLHLRREDDDGLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARK 88
T NHLI ++++ ++A ++F+Q ++ +WN M+S YV+ G++ AR
Sbjct: 82 TLLSNHLIGMYMKCGKP---IDACKVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARV 134
Query: 87 VFDQMPVRDVVSWNTMLTG 31
VFD MP RDVVSWNTM+ G
Sbjct: 135 VFDSMPERDVVSWNTMVIG 153
>TAIR9_protein||AT4G37170.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:17498580-17500655 REVERSE
Length = 692
Score = 61 bits (147), Expect = 7e-010
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -2
Query: 210 LVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTG 31
LV+AR++F++ + D+ +WN M++ Y + GL+ EARK+FD+M +D SW M+TG
Sbjct: 136 LVDARKVFDE----MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTG 191
Query: 30 LKKGRDYPE 4
K +D PE
Sbjct: 192 YVK-KDQPE 199
>TAIR9_protein||AT2G35030.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:14761080-14762963 REVERSE
Length = 628
Score = 59 bits (142), Expect = 3e-009
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = -2
Query: 204 EARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTGLK 25
EARRLF+ +I +WNAMI+ Y Q I EA ++F MP RD SWNTM+TG
Sbjct: 220 EARRLFD----CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI 275
Query: 24 KGRD 13
+ R+
Sbjct: 276 RNRE 279
Score = 57 bits (136), Expect = 1e-008
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = -2
Query: 156 DISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTGLKKGRDYPES 1
+I +WN+M+ A VQRG I EA +F++MP RDVVSW M+ GL K E+
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEA 221
>TAIR9_protein||AT1G08070.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:2514374-2516599 REVERSE
Length = 742
Score = 58 bits (138), Expect = 7e-009
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Frame = -2
Query: 210 LVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTG 31
L +A ++F++ + D+ ++ A+I Y RG I A+K+FD++PV+DVVSWN M++G
Sbjct: 185 LEDAHKVFDK----SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 30 LKKGRDYPES 1
+ +Y E+
Sbjct: 241 YAETGNYKEA 250
>TAIR9_protein||AT3G29230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:11188803-11190605 FORWARD
Length = 601
Score = 58 bits (138), Expect = 7e-009
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -2
Query: 213 GLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLT 34
G+ +A +LF + + D +WN+M+ V+ G + +AR++FD+MP RD++SWNTML
Sbjct: 169 GVRDAMKLFEK----MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLD 224
Query: 33 GLKKGRD 13
G + R+
Sbjct: 225 GYARCRE 231
>TAIR9_protein||AT3G22690.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:8020757-8024534 REVERSE
Length = 979
Score = 56 bits (134), Expect = 2e-008
Identities = 27/85 (31%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Frame = -2
Query: 255 NHLINLHLRREDDDGLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQ 76
N LI+++++ D A R+F++ T + TWN++++ YV+ G + A + F+
Sbjct: 376 NALIDMYMKCHRQD---TAFRIFDRMSNKT----VVTWNSIVAGYVENGEVDAAWETFET 428
Query: 75 MPVRDVVSWNTMLTGLKKGRDYPES 1
MP +++VSWNT+++GL +G + E+
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEA 453
>TAIR9_protein||AT5G08510.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:2753099-2754731 FORWARD
Length = 512
Score = 56 bits (134), Expect = 2e-008
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = -2
Query: 201 ARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTGLKK 22
ARR+F++ + D+ WNAMI+ Y +RG + A ++FD MP ++V SW T+++G +
Sbjct: 136 ARRVFDE----MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQ 191
Query: 21 GRDYPES 1
+Y E+
Sbjct: 192 NGNYSEA 198
>TAIR9_protein||AT1G09410.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:3035443-3037560 FORWARD
Length = 706
Score = 56 bits (133), Expect = 3e-008
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Frame = -2
Query: 204 EARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTG 31
+AR+LF++ +I +WN ++S Y++ G I EARKVFD MP R+VVSW ++ G
Sbjct: 66 DARKLFDE----MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKG 119
>TAIR9_protein||AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION
4) | chr2:18694816-18696636 REVERSE
Length = 607
Score = 56 bits (133), Expect = 3e-008
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = -2
Query: 225 EDDDGLVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWN 46
+ DG+ A +LF D+ +WN+MI YV+ G I +A+ +FD MP RDVV+W
Sbjct: 225 QTSDGVDIASKLF----ADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWA 280
Query: 45 TMLTGLKK 22
TM+ G K
Sbjct: 281 TMIDGYAK 288
>TAIR9_protein||AT2G42920.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:17858705-17860384 FORWARD
Length = 560
Score = 56 bits (133), Expect = 3e-008
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Frame = -2
Query: 210 LVEARRLFNQNRTSTTSLDISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTG 31
L+EA R+F D+ WN+MI + + GLI +A+ +FD+MP R+ VSWN+M++G
Sbjct: 177 LIEAWRIF----LGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISG 232
Query: 30 -LKKGR 16
++ GR
Sbjct: 233 FVRNGR 238
>TAIR9_protein||AT3G03580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:860695-863343 REVERSE
Length = 883
Score = 56 bits (133), Expect = 3e-008
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = -2
Query: 156 DISTWNAMISAYVQRGLISEARKVFDQMPVRDVVSWNTMLTGLKKGRDYPES 1
D+ NA++ Y + GL++ AR+VFD+MPVRD+VSWN++++G Y E+
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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