BLASTX 7.6.2
Query= UN82588 /QuerySize=810
(809 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18396707|ref|NP_566217.1| H/ACA ribonucleoprotein complex sub... 302 5e-080
gi|21536739|gb|AAM61071.1| putative GAR1 protein [Arabidopsis th... 301 1e-079
gi|297833072|ref|XP_002884418.1| hypothetical protein ARALYDRAFT... 297 2e-078
gi|115486013|ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japo... 294 1e-077
gi|125534871|gb|EAY81419.1| hypothetical protein OsI_36586 [Oryz... 292 5e-077
gi|6006850|gb|AAF00626.1|AC009540_3 putative GAR1 protein [Arabi... 292 7e-077
gi|195628096|gb|ACG35878.1| h/ACA ribonucleoprotein complex subu... 285 8e-075
gi|242068939|ref|XP_002449746.1| hypothetical protein SORBIDRAFT... 282 4e-074
gi|224125874|ref|XP_002319696.1| predicted protein [Populus tric... 280 2e-073
gi|212724098|ref|NP_001132376.1| hypothetical protein LOC1001938... 275 7e-072
gi|195610388|gb|ACG27024.1| h/ACA ribonucleoprotein complex subu... 274 1e-071
gi|195645644|gb|ACG42290.1| h/ACA ribonucleoprotein complex subu... 273 3e-071
gi|255568916|ref|XP_002525428.1| H/ACA ribonucleoprotein complex... 271 1e-070
gi|326493042|dbj|BAJ84982.1| predicted protein [Hordeum vulgare ... 262 5e-068
gi|297811983|ref|XP_002873875.1| hypothetical protein ARALYDRAFT... 260 2e-067
gi|15238764|ref|NP_197319.1| H/ACA ribonucleoprotein complex sub... 259 5e-067
gi|225441619|ref|XP_002281927.1| PREDICTED: hypothetical protein... 258 1e-066
gi|224144798|ref|XP_002325418.1| predicted protein [Populus tric... 258 1e-066
gi|168050935|ref|XP_001777912.1| predicted protein [Physcomitrel... 257 2e-066
gi|168036489|ref|XP_001770739.1| predicted protein [Physcomitrel... 245 7e-063
>gi|18396707|ref|NP_566217.1| H/ACA ribonucleoprotein complex subunit 1
[Arabidopsis thaliana]
Length = 202
Score = 302 bits (772), Expect = 5e-080
Identities = 168/211 (79%), Positives = 173/211 (81%), Gaps = 26/211 (12%)
Frame = -2
Query: 733 RGGGSFRGRGGRD-GGGGRFGGGGGR--GGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSE 563
RGGG FRGRGGRD GGGGRFGGGGGR GGGGRFGGGGGR GG+RDEGPPSE
Sbjct: 6 RGGGGFRGRGGRDGGGGGRFGGGGGRFGGGGGRFGGGGGR--------FGGFRDEGPPSE 57
Query: 562 VIEVATFVHACEGDAVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMME 383
V+EVATFVHACEGDAVTKLSQEKIP+FNAPIYLENKTQIGKVDEIFGPINESLFSIKMME
Sbjct: 58 VVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKMME 117
Query: 382 GIVATSYAQGDKFYIDPAKLLPLARFLPQPKGQSGGGRGRGRGAPRGRGGFSSRGAPRGR 203
GIVATSY+ GDKF+IDP KLLPLARFLPQPKGQS GGRG GA RGRG SRG RGR
Sbjct: 118 GIVATSYSPGDKFFIDPYKLLPLARFLPQPKGQSTGGRG---GAGRGRG--DSRG--RGR 170
Query: 202 GGFSS--RGAPRGRGGFSSRGG-----RGRG 131
GG S RGAPRG G F RGG RGRG
Sbjct: 171 GGSFSRGRGAPRG-GRFPPRGGSRGSFRGRG 200
>gi|21536739|gb|AAM61071.1| putative GAR1 protein [Arabidopsis thaliana]
Length = 202
Score = 301 bits (769), Expect = 1e-079
Identities = 167/211 (79%), Positives = 173/211 (81%), Gaps = 26/211 (12%)
Frame = -2
Query: 733 RGGGSFRGRGGRD-GGGGRFGGGGGR--GGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSE 563
RGGG FRGRGGRD GGGGRFGGGGGR GGGGRFGGGGGR GG+RDEGPPSE
Sbjct: 6 RGGGGFRGRGGRDGGGGGRFGGGGGRFGGGGGRFGGGGGR--------FGGFRDEGPPSE 57
Query: 562 VIEVATFVHACEGDAVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMME 383
V++VATFVHACEGDAVTKLSQEKIP+FNAPIYLENKTQIGKVDEIFGPINESLFSIKMME
Sbjct: 58 VVDVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKMME 117
Query: 382 GIVATSYAQGDKFYIDPAKLLPLARFLPQPKGQSGGGRGRGRGAPRGRGGFSSRGAPRGR 203
GIVATSY+ GDKF+IDP KLLPLARFLPQPKGQS GGRG GA RGRG SRG RGR
Sbjct: 118 GIVATSYSPGDKFFIDPYKLLPLARFLPQPKGQSTGGRG---GAGRGRG--DSRG--RGR 170
Query: 202 GGFSS--RGAPRGRGGFSSRGG-----RGRG 131
GG S RGAPRG G F RGG RGRG
Sbjct: 171 GGSFSRGRGAPRG-GRFPPRGGSRGSFRGRG 200
>gi|297833072|ref|XP_002884418.1| hypothetical protein ARALYDRAFT_477645
[Arabidopsis lyrata subsp. lyrata]
Length = 201
Score = 297 bits (759), Expect = 2e-078
Identities = 160/206 (77%), Positives = 168/206 (81%), Gaps = 24/206 (11%)
Frame = -2
Query: 733 RGGGSFRGRGGRD-GGGGRFGGGGGR--GGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSE 563
RGGG FRGRGGRD GGGGRFGGGGGR GGGGRFGGGGGR GG+RDEGPPSE
Sbjct: 6 RGGGGFRGRGGRDGGGGGRFGGGGGRFGGGGGRFGGGGGR--------FGGFRDEGPPSE 57
Query: 562 VIEVATFVHACEGDAVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMME 383
V+EVATF+HACEGDAVTKLS EKIP+FNA IYLENKTQIGKVDEIFGPINESLFSIKMME
Sbjct: 58 VVEVATFLHACEGDAVTKLSNEKIPHFNAAIYLENKTQIGKVDEIFGPINESLFSIKMME 117
Query: 382 GIVATSYAQGDKFYIDPAKLLPLARFLPQPKGQS-----GGGRGRGRGAPRGRGG-FSSR 221
GIVATSY+ GDKF+IDP KLLPL+RFLPQPKGQS G GRGRG G RGRGG F R
Sbjct: 118 GIVATSYSPGDKFFIDPYKLLPLSRFLPQPKGQSTGGRGGAGRGRGDGRGRGRGGSFRGR 177
Query: 220 GAPRG-----RGGFSSRGAPRGRGGF 158
GAPRG RGG SRG+ RGRG F
Sbjct: 178 GAPRGGRFPPRGG--SRGSFRGRGRF 201
>gi|115486013|ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japonica Group]
Length = 196
Score = 294 bits (752), Expect = 1e-077
Identities = 151/199 (75%), Positives = 164/199 (82%), Gaps = 19/199 (9%)
Frame = -2
Query: 709 RGGRDGGGGRFGGGGGRGGGGRFGGGGGRGG-------GGRFGGGGGYRDEGPPSEVIEV 551
R R GGGGRFGG GGGGRFGGGGGRGG GGR GGGGG+RDEGPP+EV+EV
Sbjct: 2 RPPRGGGGGRFGG----GGGGRFGGGGGRGGRFGGGGRGGR-GGGGGFRDEGPPAEVVEV 56
Query: 550 ATFVHACEGDAVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVA 371
+TF+HACEGDAVTKL+ EK+PYFNAPIYL+NKTQIGKVDEIFGPINESLFSIKM+EGI+A
Sbjct: 57 STFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINESLFSIKMLEGIIA 116
Query: 370 TSYAQGDKFYIDPAKLLPLARFLPQPKGQS-GGGRGRGRGAPRGRGGFSSRGAPRGRGGF 194
TSY++GDKFYIDP KLLPL+RFLPQPKGQS GGGRG GRG GRGGF RG GGF
Sbjct: 117 TSYSEGDKFYIDPMKLLPLSRFLPQPKGQSQGGGRGGGRGG--GRGGFRGRGG----GGF 170
Query: 193 SSRGAPRGRGGFSSRGGRG 137
RGAPRGRGG GGRG
Sbjct: 171 RGRGAPRGRGGPPRGGGRG 189
>gi|125534871|gb|EAY81419.1| hypothetical protein OsI_36586 [Oryza sativa Indica
Group]
Length = 196
Score = 292 bits (746), Expect = 5e-077
Identities = 153/203 (75%), Positives = 166/203 (81%), Gaps = 20/203 (9%)
Frame = -2
Query: 709 RGGRDGGGGRFGGGGGRGGGGRFGGGGGRGG-------GGRFGGGGGYRDEGPPSEVIEV 551
R R GGGGRFGG GGGGRFGGGGGRGG GGR GGGGG+RDEGPP+EV+EV
Sbjct: 2 RPPRGGGGGRFGG----GGGGRFGGGGGRGGRFGGGGRGGR-GGGGGFRDEGPPAEVVEV 56
Query: 550 ATFVHACEGDAVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVA 371
+TF+HACEGDAVTKL+ EK+PYFNAPIYL+NKTQIGKVDEIFGPINESLFSIKM+EGI+A
Sbjct: 57 STFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINESLFSIKMLEGIIA 116
Query: 370 TSYAQGDKFYIDPAKLLPLARFLPQPKGQS-GGGRGRGRGAPRGRGGFSSRGAPRGRGGF 194
TSY++GDKFYIDP KLLPL+RFLPQPKGQS GGGRG GRG GRGG G RG GGF
Sbjct: 117 TSYSEGDKFYIDPMKLLPLSRFLPQPKGQSQGGGRGGGRGG-GGRGG----GRGRGGGGF 171
Query: 193 SSRGAPRGRGG--FSSRGGRGRG 131
RGAPRGRGG RG RGRG
Sbjct: 172 RGRGAPRGRGGPRGGGRGFRGRG 194
>gi|6006850|gb|AAF00626.1|AC009540_3 putative GAR1 protein [Arabidopsis
thaliana]
Length = 219
Score = 292 bits (745), Expect = 7e-077
Identities = 168/230 (73%), Positives = 174/230 (75%), Gaps = 43/230 (18%)
Frame = -2
Query: 733 RGGGSFRGRGGRD-GGGGRFGGGGGR--GGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSE 563
RGGG FRGRGGRD GGGGRFGGGGGR GGGGRFGGGGGR GG+RDEGPPSE
Sbjct: 6 RGGGGFRGRGGRDGGGGGRFGGGGGRFGGGGGRFGGGGGR--------FGGFRDEGPPSE 57
Query: 562 VIEVATFVHACEGDAVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMME 383
V+EVATFVHACEGDAVTKLSQEKIP+FNAPIYLENKTQIGKVDEIFGPINESLFSIKMME
Sbjct: 58 VVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKMME 117
Query: 382 GIVATSYAQGDKFYIDPAKLLPLARFLPQPK-----------------GQSGGGRGRGRG 254
GIVATSY+ GDKF+IDP KLLPLARFLPQPK GQS GGRG G
Sbjct: 118 GIVATSYSPGDKFFIDPYKLLPLARFLPQPKVVNCIKLHLTACLCSSRGQSTGGRG---G 174
Query: 253 APRGRGGFSSRGAPRGRGGFSS--RGAPRGRGGFSSRGG-----RGRGGY 125
A RGRG SRG RGRGG S RGAPRG G F RGG RGRG +
Sbjct: 175 AGRGRG--DSRG--RGRGGSFSRGRGAPRG-GRFPPRGGSRGSFRGRGRF 219
>gi|195628096|gb|ACG35878.1| h/ACA ribonucleoprotein complex subunit 1-like
protein 1 [Zea mays]
Length = 196
Score = 285 bits (727), Expect = 8e-075
Identities = 146/196 (74%), Positives = 161/196 (82%), Gaps = 19/196 (9%)
Frame = -2
Query: 694 GGGGRFGGGGGRG-GGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDA 518
GGGGRFGGGGGRG GGGRFGGGG GGGGRF GGG+RDEGPP+EV+EV+TF+HACEG+A
Sbjct: 8 GGGGRFGGGGGRGRGGGRFGGGGRGGGGGRF--GGGFRDEGPPAEVVEVSTFLHACEGEA 65
Query: 517 VTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYI 338
VTKL+ EK+PYFNAPIYL+NKTQIGKV+EIFGPINES FS+KMMEGI+ATSY +GDKFYI
Sbjct: 66 VTKLTNEKVPYFNAPIYLQNKTQIGKVEEIFGPINESYFSVKMMEGIIATSYNEGDKFYI 125
Query: 337 DPAKLLPLARFLPQPKGQS-----GGGRGRGRGAPRGRGGFSSRGAPRGRGGFSSRGAPR 173
DP KLLPL+RFLPQPKGQS GGGRG GRG RGRGG S RG RG PR
Sbjct: 126 DPMKLLPLSRFLPQPKGQSQGAPRGGGRGGGRGFGRGRGGGSFRG---------GRGPPR 176
Query: 172 GRGGFSSRGGRGRGGY 125
G GG RGG GRGG+
Sbjct: 177 G-GGRGPRGG-GRGGF 190
>gi|242068939|ref|XP_002449746.1| hypothetical protein SORBIDRAFT_05g022540
[Sorghum bicolor]
Length = 194
Score = 282 bits (721), Expect = 4e-074
Identities = 144/192 (75%), Positives = 159/192 (82%), Gaps = 16/192 (8%)
Frame = -2
Query: 694 GGGGRFGGGGGR-GGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDA 518
GGGGRFGGGGGR GGGGRFGGGG GGGGRF GGG+RDEGPP+EV+EV+TF+HACEG+A
Sbjct: 8 GGGGRFGGGGGRGGGGGRFGGGGRGGGGGRF--GGGFRDEGPPAEVVEVSTFLHACEGEA 65
Query: 517 VTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYI 338
VTKL+ EK+PYFNAPIYL+NKTQIGKV+EIFGPINES FS+KMM+GI+ATSY +GDKFYI
Sbjct: 66 VTKLTNEKVPYFNAPIYLQNKTQIGKVEEIFGPINESYFSVKMMDGIIATSYKEGDKFYI 125
Query: 337 DPAKLLPLARFLPQPKGQS-----GGGRGRGRGAPRGRGGFS---SRGAPRGRGGFSSRG 182
DP KLLPL+RFLPQPKGQS GGGRG GRG RGRGG S RG PRG G RG
Sbjct: 126 DPMKLLPLSRFLPQPKGQSQGGPRGGGRG-GRGGGRGRGGGSFRGGRGPPRGGG----RG 180
Query: 181 APRGRGGFSSRG 146
GRGGF RG
Sbjct: 181 RGGGRGGFRGRG 192
>gi|224125874|ref|XP_002319696.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 280 bits (716), Expect = 2e-073
Identities = 155/208 (74%), Positives = 164/208 (78%), Gaps = 11/208 (5%)
Frame = -2
Query: 742 RPPRGGGSFRGRGGRDGG--GGRFGG-GGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGP 572
RPPRGGG RGGRDGG GGR GG GGR GG R GG G GGR G GGG+RDEGP
Sbjct: 2 RPPRGGGF---RGGRDGGFRGGRDGGFRGGRDGGFR-GGRDGGFRGGRGGRGGGFRDEGP 57
Query: 571 PSEVIEVATFVHACEGDAVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIK 392
PSEVIEV++F+HACEGDAVTKL+ EKIPYFNAPI+L+NKTQIGKVDEIFGPINES FSIK
Sbjct: 58 PSEVIEVSSFLHACEGDAVTKLTNEKIPYFNAPIFLQNKTQIGKVDEIFGPINESYFSIK 117
Query: 391 MMEGIVATSYAQGDKFYIDPAKLLPLARFLPQPKGQSGGGRGRGRGAPRGRGGF-SSRGA 215
MMEGIVATSYA GDKFYIDP+KLLPLARFL QPKGQ+ GGRG GRG RGRGGF RG
Sbjct: 118 MMEGIVATSYAPGDKFYIDPSKLLPLARFLTQPKGQAQGGRGGGRGG-RGRGGFGGGRGD 176
Query: 214 PRGRGGFSSRGAPRGRGGFSSRGGRGRG 131
RGRG RG PRG G G RGRG
Sbjct: 177 FRGRG--RGRGPPRGGGRGRGGGFRGRG 202
>gi|212724098|ref|NP_001132376.1| hypothetical protein LOC100193822 [Zea mays]
Length = 191
Score = 275 bits (702), Expect = 7e-072
Identities = 143/190 (75%), Positives = 155/190 (81%), Gaps = 15/190 (7%)
Frame = -2
Query: 694 GGGGRFGGGGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAV 515
GGGGRFGGGGGRGGGG GGGGR GGRF GGG+RDEGPP+EV+EV+TFVHACEGDAV
Sbjct: 8 GGGGRFGGGGGRGGGGGRFGGGGR--GGRF--GGGFRDEGPPAEVVEVSTFVHACEGDAV 63
Query: 514 TKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYID 335
TKL+ EK+PYFNAPIYL+NKTQ+GKVDEIFGPINES FS+KMMEGI+ATSY +GDKFYID
Sbjct: 64 TKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINESYFSVKMMEGIIATSYKEGDKFYID 123
Query: 334 PAKLLPLARFLPQPKGQS-----GGGRGRGRGAPRGRGGF--SSRGAPRGRGGFSSRGAP 176
P KLLPL+RFLPQPKGQS GGGRG GRG RGRGG RG PRG GG RG
Sbjct: 124 PMKLLPLSRFLPQPKGQSQGAPRGGGRG-GRGGGRGRGGSFRGGRGPPRG-GGRGPRGG- 180
Query: 175 RGRGGFSSRG 146
RGGF RG
Sbjct: 181 -SRGGFRGRG 189
>gi|195610388|gb|ACG27024.1| h/ACA ribonucleoprotein complex subunit 1-like
protein 1 [Zea mays]
Length = 191
Score = 274 bits (700), Expect = 1e-071
Identities = 143/190 (75%), Positives = 155/190 (81%), Gaps = 15/190 (7%)
Frame = -2
Query: 694 GGGGRFGGGGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAV 515
GGGGRFGGGGGRGGGG GGGGR GGRF GGG+RDEGPP+EV+EV+TFVHACEGDAV
Sbjct: 8 GGGGRFGGGGGRGGGGGRFGGGGR--GGRF--GGGFRDEGPPAEVVEVSTFVHACEGDAV 63
Query: 514 TKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYID 335
TKL+ EK+PYFNAPIYL+NKTQ+GKVDEIFGPINES FS+KMMEGI+ATSY +GDKFYID
Sbjct: 64 TKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINESYFSVKMMEGIIATSYKEGDKFYID 123
Query: 334 PAKLLPLARFLPQPKGQS-----GGGRGRGRGAPRGRGGF--SSRGAPRGRGGFSSRGAP 176
KLLPL+RFLPQPKGQS GGGRG GRG RGRGG RG PRG GG RG
Sbjct: 124 AMKLLPLSRFLPQPKGQSQGAPRGGGRG-GRGGGRGRGGSFRGGRGPPRG-GGRGPRGG- 180
Query: 175 RGRGGFSSRG 146
GRGGF RG
Sbjct: 181 -GRGGFRGRG 189
>gi|195645644|gb|ACG42290.1| h/ACA ribonucleoprotein complex subunit 1-like
protein 1 [Zea mays]
Length = 191
Score = 273 bits (696), Expect = 3e-071
Identities = 141/190 (74%), Positives = 155/190 (81%), Gaps = 15/190 (7%)
Frame = -2
Query: 694 GGGGRFGGGGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAV 515
GGGGRFGGGGGRGGGG GGGGR GGRF GGG+RDEGPP+EV+EV+TF+H+CEGDAV
Sbjct: 8 GGGGRFGGGGGRGGGGGRFGGGGR--GGRF--GGGFRDEGPPAEVVEVSTFLHSCEGDAV 63
Query: 514 TKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYID 335
TKL+ EK+PYFNAPIYL+NKTQ+GKVDEIFGPINES FS+KMMEGI+ATSY +GDKFYID
Sbjct: 64 TKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINESYFSVKMMEGIIATSYKEGDKFYID 123
Query: 334 PAKLLPLARFLPQPKGQS-----GGGRGRGRGAPRGRGGF--SSRGAPRGRGGFSSRGAP 176
P KLLPL+RFLPQPKGQS GGGRG GRG RGRGG RG PRG GG RG
Sbjct: 124 PMKLLPLSRFLPQPKGQSQGAPRGGGRG-GRGGGRGRGGSFRGGRGPPRG-GGRGPRGG- 180
Query: 175 RGRGGFSSRG 146
RGGF RG
Sbjct: 181 -SRGGFRGRG 189
>gi|255568916|ref|XP_002525428.1| H/ACA ribonucleoprotein complex subunit,
putative [Ricinus communis]
Length = 194
Score = 271 bits (691), Expect = 1e-070
Identities = 142/188 (75%), Positives = 150/188 (79%), Gaps = 7/188 (3%)
Frame = -2
Query: 691 GGGRFGGGGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAVT 512
GGG G GGG GGR GGG GRGGGGR GGG+RDEGPPSEVIEV+TF+HACEGDAVT
Sbjct: 6 GGGFRGRGGGGFRGGRDGGGRGRGGGGR---GGGFRDEGPPSEVIEVSTFLHACEGDAVT 62
Query: 511 KLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYIDP 332
KL+ EKIPYFNAPI+LENKTQIGKVDEIFGPINES FS+KMMEGIVATSY GDKFYIDP
Sbjct: 63 KLTNEKIPYFNAPIFLENKTQIGKVDEIFGPINESYFSVKMMEGIVATSYKPGDKFYIDP 122
Query: 331 AKLLPLARFLPQPKGQS-GGGRGRGRGAPRGRGGFSSRGAPRGRGGFSSRGAPRGRGGFS 155
KLLPL RFLPQPKGQ+ GGRG GRG GRGG G+ RG GGF RG PRG G
Sbjct: 123 YKLLPLERFLPQPKGQAQAGGRGGGRGG--GRGGGRGGGSFRGGGGFRGRGGPRGGRG-P 179
Query: 154 SRGGRGRG 131
RGGRG G
Sbjct: 180 PRGGRGGG 187
>gi|326493042|dbj|BAJ84982.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 187
Score = 262 bits (669), Expect = 5e-068
Identities = 138/188 (73%), Positives = 153/188 (81%), Gaps = 15/188 (7%)
Frame = -2
Query: 694 GGGGRFGGGGGRGGGGRFGGGG-GRGGGGRF-GGGGGYRDEGPPSEVIEVATFVHACEGD 521
GGGG G GG R GGRFGGGG G GG GRF GGGGG+RDEGPP+EV+EV+TF+HACEGD
Sbjct: 6 GGGGFRGRGGDR--GGRFGGGGRGGGGRGRFGGGGGGFRDEGPPAEVVEVSTFLHACEGD 63
Query: 520 AVTKLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFY 341
AVTKL+ EK+PYFNAPIYL+NKTQIGKVDEIFGPINES FS+KM EG++ATSY +GDKF+
Sbjct: 64 AVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMFEGVIATSYNEGDKFF 123
Query: 340 IDPAKLLPLARFLPQPKGQS--GGGRGRGRGAPR-GRGGFSSRGAPRGRGGFSSRGAPRG 170
IDP KLLPL+RFLPQPKG + GGGRG GRG R GRGGF RGAPRG RG PRG
Sbjct: 124 IDPMKLLPLSRFLPQPKGSTPRGGGRG-GRGVARGGRGGFRGRGAPRG------RGPPRG 176
Query: 169 RG-GFSSR 149
G GF R
Sbjct: 177 GGRGFRGR 184
>gi|297811983|ref|XP_002873875.1| hypothetical protein ARALYDRAFT_350922
[Arabidopsis lyrata subsp. lyrata]
Length = 196
Score = 260 bits (664), Expect = 2e-067
Identities = 139/190 (73%), Positives = 148/190 (77%), Gaps = 11/190 (5%)
Frame = -2
Query: 676 GGGGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAVTKLSQE 497
GGG RG GGR GGG G GGGGR G + DEGPPSEV+EVATF+HACEGDAV KLS
Sbjct: 6 GGGSFRGRGGRDGGGRGFGGGGR----GRFGDEGPPSEVVEVATFLHACEGDAVFKLSNV 61
Query: 496 KIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYIDPAKLLP 317
KIP+FNAPIYL+NKTQIG+VDEIFGPINESLFSIKM EGIVATSY QGDKF+I P KLLP
Sbjct: 62 KIPHFNAPIYLQNKTQIGRVDEIFGPINESLFSIKMKEGIVATSYTQGDKFFISPEKLLP 121
Query: 316 LARFLPQPKGQS---GGGR--GRGRGAPRGRGGFSSRGAPRGRGGFSSRGAPRG-RGGFS 155
L+RFLPQPKGQS GGGR RGRG PRGRG RG PRGRG F RGAPR GF
Sbjct: 122 LSRFLPQPKGQSAGRGGGRVPPRGRGPPRGRGPPRGRGPPRGRGNFRGRGAPRSVSRGFH 181
Query: 154 SRGGRGRGGY 125
RGG RGG+
Sbjct: 182 QRGG-PRGGF 190
>gi|15238764|ref|NP_197319.1| H/ACA ribonucleoprotein complex subunit 1-like
protein 2 [Arabidopsis thaliana]
Length = 189
Score = 259 bits (660), Expect = 5e-067
Identities = 140/188 (74%), Positives = 148/188 (78%), Gaps = 12/188 (6%)
Frame = -2
Query: 691 GGGRFGGGGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAVT 512
GGG F G GGR GGR G G GR G GRFGGG DEGPPSEV+EVATF+HACEGDAV
Sbjct: 6 GGGSFRGRGGRDNGGR-GRGRGR-GRGRFGGGN--YDEGPPSEVVEVATFLHACEGDAVF 61
Query: 511 KLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYIDP 332
KLS KIP+FNAPIYL+NKTQIG+VDEIFGPINESLFSIKM EGIVATSY+QGDKF+I P
Sbjct: 62 KLSNVKIPHFNAPIYLQNKTQIGRVDEIFGPINESLFSIKMREGIVATSYSQGDKFFISP 121
Query: 331 AKLLPLARFLPQPKGQSGG-GRG----RGRGAPRGRGGFSSRGAPRGRG-GFSSRGAPRG 170
KLLPL+RFLPQPKGQSGG G G RGRG PRGRG F RGAPRG GF RG P
Sbjct: 122 EKLLPLSRFLPQPKGQSGGRGEGRVPPRGRGPPRGRGNFRGRGAPRGASRGFQPRGGP-- 179
Query: 169 RGGFSSRG 146
RGGF RG
Sbjct: 180 RGGFRGRG 187
>gi|225441619|ref|XP_002281927.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 188
Score = 258 bits (657), Expect = 1e-066
Identities = 134/181 (74%), Positives = 143/181 (79%), Gaps = 8/181 (4%)
Frame = -2
Query: 664 GRGGG--GRFGGGGGRGGGGRFGGG-GGYRDEGPPSEVIEVATFVHACEGDAVTKLSQEK 494
GRGGG GR GG GGR GGGRFGGG GG+RDEGPPSEV+EV+TF+HACEGDAVT+L+ K
Sbjct: 6 GRGGGFRGRDGGRGGRFGGGRFGGGRGGFRDEGPPSEVVEVSTFLHACEGDAVTRLTNAK 65
Query: 493 IPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYIDPAKLLPL 314
IPYFNAPIYL+NKTQIGKVDEIFGPINES FSIKMMEGIVATSY+ GDKF+IDPAKLLPL
Sbjct: 66 IPYFNAPIYLQNKTQIGKVDEIFGPINESYFSIKMMEGIVATSYSSGDKFFIDPAKLLPL 125
Query: 313 ARFLPQPKGQSGGGRGRGRGAPRGRGGFSSRGAPRGRGGFSSRGAPRGRGGFSSRGGRGR 134
RFLPQPKG GRG RG G RG RG GGF RG PRG G RGGRG
Sbjct: 126 ERFLPQPKGHPQAAFRGGRGGGRGGG----RGGGRGGGGFRGRGGPRGGRG-PPRGGRGG 180
Query: 133 G 131
G
Sbjct: 181 G 181
>gi|224144798|ref|XP_002325418.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 258 bits (657), Expect = 1e-066
Identities = 138/185 (74%), Positives = 148/185 (80%), Gaps = 13/185 (7%)
Frame = -2
Query: 673 GGGGRGG--GGRFGGGGGRGGGGRFG---GGGGYRDEGPPSEVIEVATFVHACEGDAVTK 509
GGG RGG GG GG GGRGG GR G GGGG+RDEGPPSEV+EV++F+HACEGDAVTK
Sbjct: 6 GGGFRGGRDGGFRGGRGGRGGPGRGGRGFGGGGFRDEGPPSEVVEVSSFLHACEGDAVTK 65
Query: 508 LSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYIDPA 329
L+ EKIPYFNAPI+L+NKTQIGKVDEIFGPINES FSIKMMEGIVATSYA G+KFYIDP
Sbjct: 66 LTNEKIPYFNAPIFLQNKTQIGKVDEIFGPINESHFSIKMMEGIVATSYAPGEKFYIDPN 125
Query: 328 KLLPLARFLPQPKGQS----GGGRGRGRGAPRGRGGFSSRGAPRGRGGFSSRGAPRGRGG 161
KLLPLARFL QPKGQ+ GGRG GRG GRGGFS RG RGRG RG GRGG
Sbjct: 126 KLLPLARFLSQPKGQAQAAGRGGRGGGRGGRGGRGGFSGRG--RGRG--PPRGGGFGRGG 181
Query: 160 FSSRG 146
F RG
Sbjct: 182 FRGRG 186
>gi|168050935|ref|XP_001777912.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 192
Score = 257 bits (654), Expect = 2e-066
Identities = 134/189 (70%), Positives = 148/189 (78%), Gaps = 8/189 (4%)
Frame = -2
Query: 688 GGRFGGGGGRGGGGRFGGGGGRGGGGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAVTK 509
GGR GGGG RGGG R GG GG GG G FGG GGY DEGPP EV+EVA+++HACEG+AVTK
Sbjct: 7 GGRGGGGGFRGGGARGGGRGGFGGRGGFGGRGGY-DEGPPEEVVEVASYLHACEGEAVTK 65
Query: 508 LSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYIDPA 329
L+ EKIPYFNAPIYLENK+QIGKV+EIFGPINE++FS+KM EGI+ATSY GDKFYIDPA
Sbjct: 66 LTNEKIPYFNAPIYLENKSQIGKVEEIFGPINEAMFSVKMQEGIIATSYKPGDKFYIDPA 125
Query: 328 KLLPLARFLPQPKGQS-GGGRGRGRGAPRGRGGFSSRGAPRGRGGFSSRGAP--RGRGGF 158
KLLPL RFLPQPKG + GGGRG G GRGG +RG GRGGF RG RG G
Sbjct: 126 KLLPLTRFLPQPKGSTPGGGRGGRGGGRGGRGG--ARGG--GRGGFGGRGGGGFRGARGR 181
Query: 157 SSRGGRGRG 131
S G RGRG
Sbjct: 182 SGGGFRGRG 190
>gi|168036489|ref|XP_001770739.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 184
Score = 245 bits (624), Expect = 7e-063
Identities = 128/178 (71%), Positives = 142/178 (79%), Gaps = 6/178 (3%)
Frame = -2
Query: 688 GGRFGGGGGRGGGGRFGGGGGRGG-GGRFGGGGGYRDEGPPSEVIEVATFVHACEGDAVT 512
GGR GGGG RGG G G GGRGG GGR GG GGY DEGPP EV+EVA+++HACEG+AVT
Sbjct: 7 GGRGGGGGFRGGSGG-GFRGGRGGFGGRGGGRGGY-DEGPPEEVVEVASYLHACEGEAVT 64
Query: 511 KLSQEKIPYFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYAQGDKFYIDP 332
KL+ EKIPYFNAPIYLENKTQ+GKV+EIFGPINE++FS+KM EGI+ATSY GDKF+IDP
Sbjct: 65 KLTNEKIPYFNAPIYLENKTQVGKVEEIFGPINEAMFSVKMQEGIIATSYKPGDKFFIDP 124
Query: 331 AKLLPLARFLPQPKGQSGGGRGRGRGAPRGRGGFSSRGAPRGRGGFSSRGAPRGRGGF 158
AKLLPLARFLPQPKG GG G RG+ RG G RGA G GGF RG RG GGF
Sbjct: 125 AKLLPLARFLPQPKGGGRGGFG-ARGSGRGGSGGGFRGARGGGGGF--RGGARGGGGF 179
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,352,524,086,339
Number of Sequences: 15229318
Number of Extensions: 1352524086339
Number of Successful Extensions: 374284986
Number of sequences better than 0.0: 0
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