BLASTX 7.6.2
Query= UN82906 /QuerySize=672
(671 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G19950.1 | Symbols: | zinc finger (C3HC4-type... 283 1e-076
TAIR9_protein||AT1G55530.1 | Symbols: | zinc finger (C3HC4-type... 80 8e-016
TAIR9_protein||AT5G56340.1 | Symbols: ATCRT1 | zinc finger (C3HC... 77 6e-015
TAIR9_protein||AT1G50350.1 | Symbols: | FUNCTIONS IN: molecular... 72 3e-013
TAIR9_protein||AT3G13430.1 | Symbols: | zinc finger (C3HC4-type... 69 2e-012
TAIR9_protein||AT3G13430.2 | Symbols: | zinc finger (C3HC4-type... 69 2e-012
TAIR9_protein||AT3G56580.2 | Symbols: | zinc finger (C3HC4-type... 64 1e-010
TAIR9_protein||AT3G56580.1 | Symbols: | zinc finger (C3HC4-type... 64 1e-010
TAIR9_protein||AT3G56580.3 | Symbols: | zinc finger (C3HC4-type... 64 1e-010
TAIR9_protein||AT2G40830.2 | Symbols: RHC1A | RHC1A; protein bin... 63 2e-010
TAIR9_protein||AT2G40830.1 | Symbols: RHC1A | RHC1A; protein bin... 63 2e-010
TAIR9_protein||AT2G40830.3 | Symbols: RHC1A | RHC1A; protein bin... 63 2e-010
TAIR9_protein||AT4G26400.2 | Symbols: | zinc finger (C3HC4-type... 54 1e-007
TAIR9_protein||AT4G26400.1 | Symbols: | zinc finger (C3HC4-type... 54 1e-007
TAIR9_protein||AT5G01980.1 | Symbols: | zinc finger (C3HC4-type... 50 1e-006
>TAIR9_protein||AT3G19950.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:6942853-6943839 FORWARD
Length = 329
Score = 283 bits (722), Expect = 1e-076
Identities = 143/215 (66%), Positives = 165/215 (76%), Gaps = 16/215 (7%)
Frame = +2
Query: 62 MSSDGNLTATA-----VEKMFFCYQCNRTVNISISPTSDPFCPLCSGGFLEEYDEPNPNP 226
MSS N T +A V+KMFFCYQCN+TV ISIS ++DPFCP+C+ GFLEEY++PNPN
Sbjct: 1 MSSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQ 60
Query: 227 PPYLHPGGGGGGGGFFPMADPFSTLLPLLFGSSSSSNVAPSFFS-------PQPRSSTAQ 385
+P FFPMADPFSTLLPL+FGSS+++ F S PQ R ST Q
Sbjct: 61 SLNFNP---NSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQAR-STQQ 116
Query: 386 NNDDEAFDPVSFLQNHLQHLRSSGTHVQFVIENHPSDPSSRVPGNLGDYFFGPGLEQLIQ 565
N +AFDP +FLQNHLQ LRSSGTH +FVIENHPSDP +R+PGN GDYFFGPGLEQLIQ
Sbjct: 117 NPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQ 176
Query: 566 QLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
QLAENDPNRYGTPPASKSAI+ LPTVKVTKDM++S
Sbjct: 177 QLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKS 211
>TAIR9_protein||AT1G55530.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:20729472-20730527 REVERSE
Length = 352
Score = 80 bits (197), Expect = 8e-016
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +2
Query: 458 THVQFVIENHPSDPSSRVPGNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLP 637
T Q + + +D S G+LGDYF GPG E L+Q+LAENDPNRYGTPPA K A+E L
Sbjct: 154 TSNQTITVQNSADMDSVPAGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALA 213
Query: 638 TVKVTKDMMRS 670
TVK+ + + S
Sbjct: 214 TVKIEETLQCS 224
>TAIR9_protein||AT5G56340.1 | Symbols: ATCRT1 | zinc finger (C3HC4-type RING
finger) family protein | chr5:22818254-22819444 FORWARD
Length = 397
Score = 77 bits (189), Expect = 6e-015
Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +2
Query: 488 PSDPSSRVPG--NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDM 661
PSD + P +LGDYF GPGL+ L+Q LAENDPNR GTPPA K A+E LPTVK+ + +
Sbjct: 198 PSDQNQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL 257
Query: 662 MRS 670
S
Sbjct: 258 QCS 260
>TAIR9_protein||AT1G50350.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: zinc finger (C3HC4-type RING finger) family protein
(TAIR:AT3G19950.1); Has 18 Blast hits to 18 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:18648756-18649227 FORWARD
Length = 134
Score = 72 bits (175), Expect = 3e-013
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Frame = +2
Query: 62 MSSDGNLTATAV----EKMFFCYQCNRTVNISISPTSDPFCPLCSGGFLEEYDEPNPNPP 229
M+S GN +V EKM FCYQ ++T+ ISI+ ++DP CPLC+GGFL+EY +PNPNP
Sbjct: 1 MTSGGNSIEPSVVAEAEKMLFCYQYDQTITISITSSADP-CPLCNGGFLDEYVDPNPNPI 59
Query: 230 PYL 238
P L
Sbjct: 60 PNL 62
>TAIR9_protein||AT3G13430.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:4367754-4368701 FORWARD
Length = 316
Score = 69 bits (168), Expect = 2e-012
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +2
Query: 494 DPSSRVPGNLGDYFFGPGLEQLIQQLAEND-PNRYGTPPASKSAIEGLPTVKVTKDMMR 667
D +S G+LGDYF GPG E L+Q+LAEND NRYGTPPA+K A+E L VK+ +++
Sbjct: 166 DTTSVPSGSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ 224
>TAIR9_protein||AT3G13430.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:4367754-4368701 FORWARD
Length = 316
Score = 69 bits (168), Expect = 2e-012
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +2
Query: 494 DPSSRVPGNLGDYFFGPGLEQLIQQLAEND-PNRYGTPPASKSAIEGLPTVKVTKDMMR 667
D +S G+LGDYF GPG E L+Q+LAEND NRYGTPPA+K A+E L VK+ +++
Sbjct: 166 DTTSVPSGSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ 224
>TAIR9_protein||AT3G56580.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 321
Score = 64 bits (153), Expect = 1e-010
Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 518 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
N GDYFFGPGLE+LI+QL+ +R G PPA KS+I+ LPT+K+T+ ++S
Sbjct: 132 NAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKS 181
>TAIR9_protein||AT3G56580.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 321
Score = 64 bits (153), Expect = 1e-010
Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 518 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
N GDYFFGPGLE+LI+QL+ +R G PPA KS+I+ LPT+K+T+ ++S
Sbjct: 132 NAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKS 181
>TAIR9_protein||AT3G56580.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 321
Score = 64 bits (153), Expect = 1e-010
Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 518 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
N GDYFFGPGLE+LI+QL+ +R G PPA KS+I+ LPT+K+T+ ++S
Sbjct: 132 NAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKS 181
>TAIR9_protein||AT2G40830.2 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 329
Score = 63 bits (151), Expect = 2e-010
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 GNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
GN GDYFFGPGLE+L +QL+ R G PPA +SAI+ LPT+K+ + +RS
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRS 185
>TAIR9_protein||AT2G40830.1 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 329
Score = 63 bits (151), Expect = 2e-010
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 GNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
GN GDYFFGPGLE+L +QL+ R G PPA +SAI+ LPT+K+ + +RS
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRS 185
>TAIR9_protein||AT2G40830.3 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 329
Score = 63 bits (151), Expect = 2e-010
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 GNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
GN GDYFFGPGLE+L +QL+ R G PPA +SAI+ LPT+K+ + +RS
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRS 185
>TAIR9_protein||AT4G26400.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 357
Score = 54 bits (127), Expect = 1e-007
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +2
Query: 521 LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
+GDYF G L+ L++ LA+ND R+G+ PA K ++ LPTVK+++ + S
Sbjct: 193 IGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESLQCS 242
>TAIR9_protein||AT4G26400.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 357
Score = 54 bits (127), Expect = 1e-007
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +2
Query: 521 LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTVKVTKDMMRS 670
+GDYF G L+ L++ LA+ND R+G+ PA K ++ LPTVK+++ + S
Sbjct: 193 IGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESLQCS 242
>TAIR9_protein||AT5G01980.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:375542-377023 FORWARD
Length = 494
Score = 50 bits (117), Expect = 1e-006
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +2
Query: 416 SFLQNHLQHLRSSGTHVQFVIENHPSDPSSRVPGNLGDYFFGPGLEQLIQQLAENDPNRY 595
SF Q ++ S ++ +E+ P + N+GDY G ++L++QLAE+D +R
Sbjct: 265 SFRQRIIERRHSLSRNIFTGLEDLDFSPYA---ANVGDYLDERGFDELLEQLAESDNSRR 321
Query: 596 GTPPASKSAIEGLPTVKVTKD 658
G PPAS S + LP V + ++
Sbjct: 322 GAPPASVSCVRNLPRVIIAEE 342
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|
