BLASTX 7.6.2
Query= UN83077 /QuerySize=736
(735 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297793149|ref|XP_002864459.1| ATP binding protein [Arabidopsi... 399 3e-109
gi|79330970|ref|NP_001032083.1| TCP-1/cpn60 chaperonin family pr... 399 3e-109
gi|110736632|dbj|BAF00280.1| RuBisCO subunit binding-protein bet... 399 3e-109
gi|10178220|dbj|BAB11583.1| RuBisCO subunit binding-protein beta... 399 3e-109
gi|15231255|ref|NP_187956.1| TCP-1/cpn60 chaperonin family prote... 356 3e-096
gi|15222729|ref|NP_175945.1| RuBisCO large subunit-binding prote... 352 5e-095
gi|297853250|ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subs... 352 5e-095
gi|134104|sp|P21241.1|RUBB_BRANA RecName: Full=RuBisCO large sub... 348 5e-094
gi|1762130|gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tu... 346 3e-093
gi|255564820|ref|XP_002523404.1| rubisco subunit binding-protein... 337 9e-091
gi|110349923|emb|CAJ19275.1| beta chaperonin 60 [Solanum commers... 334 8e-090
gi|224052861|ref|XP_002297617.1| predicted protein [Populus tric... 333 2e-089
gi|225435794|ref|XP_002285746.1| PREDICTED: hypothetical protein... 332 5e-089
gi|224073124|ref|XP_002303983.1| predicted protein [Populus tric... 330 1e-088
gi|2506277|sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subu... 326 2e-087
gi|225442531|ref|XP_002284134.1| PREDICTED: hypothetical protein... 325 5e-087
gi|226493641|ref|NP_001146890.1| ruBisCO large subunit-binding p... 323 2e-086
gi|195630027|gb|ACG36615.1| ruBisCO large subunit-binding protei... 322 5e-086
gi|115466004|ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japo... 320 1e-085
gi|222634842|gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryz... 320 1e-085
>gi|297793149|ref|XP_002864459.1| ATP binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 399 bits (1024), Expect = 3e-109
Identities = 213/226 (94%), Positives = 219/226 (96%), Gaps = 2/226 (0%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLSSLV--SSNSFGKSLSFAQRKARFPKICAAKELHFNKD 237
MASTFSATSSMGS LAPPSN+LSS V SS+SFGKS +FAQRKARFPKI AAK+LHFNKD
Sbjct: 1 MASTFSATSSMGSCLAPPSNRLSSFVSISSSSFGKSQTFAQRKARFPKIYAAKQLHFNKD 60
Query: 238 GTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 417
GTAI+KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVEL+DPVENI
Sbjct: 61 GTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELDDPVENI 120
Query: 418 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVA 597
GAKLVRQAASKTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKTTKALVA
Sbjct: 121 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVA 180
Query: 598 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT
Sbjct: 181 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 226
>gi|79330970|ref|NP_001032083.1| TCP-1/cpn60 chaperonin family protein
[Arabidopsis thaliana]
Length = 597
Score = 399 bits (1023), Expect = 3e-109
Identities = 213/226 (94%), Positives = 219/226 (96%), Gaps = 2/226 (0%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLSSLV--SSNSFGKSLSFAQRKARFPKICAAKELHFNKD 237
MASTFSATSSMGSSLAPPSN+LSS V SS+SFG++ S AQRKARFPKI AAK+LHFNKD
Sbjct: 1 MASTFSATSSMGSSLAPPSNRLSSFVSISSSSFGRTQSIAQRKARFPKIYAAKQLHFNKD 60
Query: 238 GTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 417
GTAI+KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
Sbjct: 61 GTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 120
Query: 418 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVA 597
GAKLVRQAASKTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKTTKALVA
Sbjct: 121 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVA 180
Query: 598 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT
Sbjct: 181 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 226
>gi|110736632|dbj|BAF00280.1| RuBisCO subunit binding-protein beta subunit
precursor [Arabidopsis thaliana]
Length = 597
Score = 399 bits (1023), Expect = 3e-109
Identities = 213/226 (94%), Positives = 219/226 (96%), Gaps = 2/226 (0%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLSSLV--SSNSFGKSLSFAQRKARFPKICAAKELHFNKD 237
MASTFSATSSMGSSLAPPSN+LSS V SS+SFG++ S AQRKARFPKI AAK+LHFNKD
Sbjct: 1 MASTFSATSSMGSSLAPPSNRLSSFVSISSSSFGRTQSIAQRKARFPKIYAAKQLHFNKD 60
Query: 238 GTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 417
GTAI+KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
Sbjct: 61 GTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 120
Query: 418 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVA 597
GAKLVRQAASKTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKTTKALVA
Sbjct: 121 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVA 180
Query: 598 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT
Sbjct: 181 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 226
>gi|10178220|dbj|BAB11583.1| RuBisCO subunit binding-protein beta subunit
precursor; chaperonin, 60 kDa [Arabidopsis thaliana]
Length = 596
Score = 399 bits (1023), Expect = 3e-109
Identities = 213/226 (94%), Positives = 219/226 (96%), Gaps = 2/226 (0%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLSSLV--SSNSFGKSLSFAQRKARFPKICAAKELHFNKD 237
MASTFSATSSMGSSLAPPSN+LSS V SS+SFG++ S AQRKARFPKI AAK+LHFNKD
Sbjct: 1 MASTFSATSSMGSSLAPPSNRLSSFVSISSSSFGRTQSIAQRKARFPKIYAAKQLHFNKD 60
Query: 238 GTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 417
GTAI+KLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
Sbjct: 61 GTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 120
Query: 418 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVA 597
GAKLVRQAASKTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKTTKALVA
Sbjct: 121 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVA 180
Query: 598 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT
Sbjct: 181 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 226
>gi|15231255|ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis
thaliana]
Length = 596
Score = 356 bits (911), Expect = 3e-096
Identities = 191/226 (84%), Positives = 205/226 (90%), Gaps = 2/226 (0%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLSSL--VSSNSFGKSLSFAQRKARFPKICAAKELHFNKD 237
MASTF+ATSS+GS LAP + KLSS +SS+SFG+ + R++R +CAAKELHFNKD
Sbjct: 1 MASTFTATSSLGSLLAPNAIKLSSATSISSSSFGRRHNVCVRRSRPAIVCAAKELHFNKD 60
Query: 238 GTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 417
GT IRKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
Sbjct: 61 GTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI 120
Query: 418 GAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVA 597
GAKLVRQAA+KTNDLAGDGTTTSVVLAQG I EGVKVVAAGANPVLITRGIEKT KALV
Sbjct: 121 GAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVN 180
Query: 598 ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ELK MSKEVEDSELADVAAVSAGNN+EVG+MIAEAM+KVGRKGVVT
Sbjct: 181 ELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVT 226
>gi|15222729|ref|NP_175945.1| RuBisCO large subunit-binding protein subunit beta
[Arabidopsis thaliana]
Length = 600
Score = 352 bits (901), Expect = 5e-095
Identities = 191/230 (83%), Positives = 202/230 (87%), Gaps = 6/230 (2%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAP----PSNKLSSLVSSNSFGKSLSFAQRKARFPK--ICAAKELH 225
MASTF+ATSS+GS +AP KL S +SS+SFG+ S R R +CAAKELH
Sbjct: 1 MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSSFGRRQSVCPRPRRSSSAIVCAAKELH 60
Query: 226 FNKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 405
FNKDGT IR+LQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
Sbjct: 61 FNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 120
Query: 406 VENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTK 585
VENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQG I EGVKVVAAGANPVLITRGIEKT K
Sbjct: 121 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK 180
Query: 586 ALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ALV ELKKMSKEVEDSELADVAAVSAGNN E+GNMIAEAM+KVGRKGVVT
Sbjct: 181 ALVTELKKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVT 230
>gi|297853250|ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata]
Length = 600
Score = 352 bits (901), Expect = 5e-095
Identities = 191/230 (83%), Positives = 202/230 (87%), Gaps = 6/230 (2%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAP----PSNKLSSLVSSNSFGKSLSFAQRKARFPK--ICAAKELH 225
MASTF+ATSS+GS +AP KL + +SS+SFG+ S R R +CAAKELH
Sbjct: 1 MASTFTATSSIGSMVAPNGHKSDKKLMNKLSSSSFGRRQSVCPRPRRSGSAIVCAAKELH 60
Query: 226 FNKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 405
FNKDGT IRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
Sbjct: 61 FNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 120
Query: 406 VENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTK 585
VENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQG I EGVKVVAAGANPVLITRGIEKT K
Sbjct: 121 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK 180
Query: 586 ALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ALV ELKKMSKEVEDSELADVAAVSAGNN E+GNMIAEAM+KVGRKGVVT
Sbjct: 181 ALVTELKKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVT 230
>gi|134104|sp|P21241.1|RUBB_BRANA RecName: Full=RuBisCO large subunit-binding
protein subunit beta, chloroplastic; AltName: Full=60 kDa chaperonin
subunit beta; AltName: Full=CPN-60 beta; Flags: Precursor
Length = 588
Score = 348 bits (892), Expect = 5e-094
Identities = 191/236 (80%), Positives = 207/236 (87%), Gaps = 18/236 (7%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSN----KLSSLVSSNSFGKSLSFAQRKARFPK--------IC 207
MASTF+ATSS+GS +AP ++ KL + +SS+SFG+ R+ FPK +C
Sbjct: 1 MASTFTATSSIGSMVAPNAHKTDKKLMNKLSSSSFGR------RQNVFPKLRRSSPAVVC 54
Query: 208 AAKELHFNKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVARE 387
AAKELHFNKDGT IRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVARE
Sbjct: 55 AAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVARE 114
Query: 388 VELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRG 567
VELEDPVENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQG I EGVKVVAAGANPVLITRG
Sbjct: 115 VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRG 174
Query: 568 IEKTTKALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
IEKT KALVAELKKMSKEVEDSELADVAAVSAGNN E+G+MIAEAM++VGRKGVVT
Sbjct: 175 IEKTAKALVAELKKMSKEVEDSELADVAAVSAGNNAEIGSMIAEAMSRVGRKGVVT 230
>gi|1762130|gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tuberosum]
Length = 599
Score = 346 bits (885), Expect = 3e-093
Identities = 191/229 (83%), Positives = 203/229 (88%), Gaps = 5/229 (2%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAP--PSNKLSSL--VSSNSFGKSLSFAQRKARFPKI-CAAKELHF 228
MASTF+ SS G AP SNKLSS+ +SS SFG + A RK+R P I AAKELHF
Sbjct: 1 MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVALRKSRRPTILAAAKELHF 60
Query: 229 NKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPV 408
NKDG+AI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYG+P+IVNDGVTVAREVELEDPV
Sbjct: 61 NKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVELEDPV 120
Query: 409 ENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKA 588
ENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKT KA
Sbjct: 121 ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKA 180
Query: 589 LVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
LVAELK MSKEVEDSELADVAAVSAGNN EVG+MIAEAM+KVGRKGVVT
Sbjct: 181 LVAELKNMSKEVEDSELADVAAVSAGNNLEVGSMIAEAMSKVGRKGVVT 229
>gi|255564820|ref|XP_002523404.1| rubisco subunit binding-protein beta subunit,
rubb, putative [Ricinus communis]
Length = 605
Score = 337 bits (864), Expect = 9e-091
Identities = 178/218 (81%), Positives = 197/218 (90%), Gaps = 3/218 (1%)
Frame = +1
Query: 91 SMGSSLAPPSNKLSSL--VSSNSFGKSLSFAQRKARFPKICA-AKELHFNKDGTAIRKLQ 261
++ A SN+LSS +S ++FG+ + R++R PKICA AK+LHFNKDG+AI+KLQ
Sbjct: 18 NVDKKFASTSNRLSSFASISGSAFGRRQNVVLRRSRSPKICAMAKDLHFNKDGSAIKKLQ 77
Query: 262 AGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQA 441
GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELEDPVENIGAKLVRQA
Sbjct: 78 TGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 137
Query: 442 ASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAELKKMSKE 621
A+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKT+KALV ELK MSKE
Sbjct: 138 AAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVTELKSMSKE 197
Query: 622 VEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
VEDSELADVAAVSAGNNYEVGNMIAEAM++VGRKGVVT
Sbjct: 198 VEDSELADVAAVSAGNNYEVGNMIAEAMSRVGRKGVVT 235
>gi|110349923|emb|CAJ19275.1| beta chaperonin 60 [Solanum commersonii]
Length = 600
Score = 334 bits (856), Expect = 8e-090
Identities = 185/229 (80%), Positives = 199/229 (86%), Gaps = 5/229 (2%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAP--PSNKLSSL--VSSNSFGKSLSFAQRKA-RFPKICAAKELHF 228
MASTF+ SS G AP SNKLSS+ +SS SFG + A RK+ R + AAKELHF
Sbjct: 1 MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVALRKSRRLTILAAAKELHF 60
Query: 229 NKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPV 408
NKDG+AI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYG+P+IVNDGVTVAREVELEDPV
Sbjct: 61 NKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVELEDPV 120
Query: 409 ENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKA 588
+NIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKT KA
Sbjct: 121 KNIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKA 180
Query: 589 LVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
LVAELK MSKEVEDSEL DVAAVSAGNN EVG+MIAE M+ VGRKGVVT
Sbjct: 181 LVAELKNMSKEVEDSELPDVAAVSAGNNLEVGSMIAEPMSTVGRKGVVT 229
>gi|224052861|ref|XP_002297617.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 333 bits (853), Expect = 2e-089
Identities = 181/227 (79%), Positives = 199/227 (87%), Gaps = 4/227 (1%)
Frame = +1
Query: 67 ASTFSATS--SMGSSLAPPSNKLSSL--VSSNSFGKSLSFAQRKARFPKICAAKELHFNK 234
A T +A + ++ A SNKLSS +S++ FG+ + ++R K+ AAKELHFNK
Sbjct: 11 AGTLAAPNARALDKKFAFSSNKLSSFASISASRFGRPQNVVLPRSRSLKVNAAKELHFNK 70
Query: 235 DGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVEN 414
DG+AIRKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELEDPVEN
Sbjct: 71 DGSAIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVEN 130
Query: 415 IGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALV 594
IGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKTT+ALV
Sbjct: 131 IGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTRALV 190
Query: 595 AELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ELK MSKEVEDSELADVAAVSAGNNYEVGNMIAEAM+KVGRKGVVT
Sbjct: 191 NELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVT 237
>gi|225435794|ref|XP_002285746.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 608
Score = 332 bits (849), Expect = 5e-089
Identities = 181/230 (78%), Positives = 203/230 (88%), Gaps = 5/230 (2%)
Frame = +1
Query: 55 VGNMASTFSATSSMGSSLAPPSNKLSSL--VSSNSFGKSLSFAQRKARFPKICA-AKELH 225
VG++A+ M LA S++LSS +SS+SFG+ + R+ R P+I A AK+L+
Sbjct: 11 VGSLAA--PGGRGMDKKLATSSDRLSSFASISSSSFGRRQNVVLRRTRSPRINAMAKDLY 68
Query: 226 FNKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 405
FNKDG+AI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELEDP
Sbjct: 69 FNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDP 128
Query: 406 VENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTK 585
VENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKTTK
Sbjct: 129 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTK 188
Query: 586 ALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
+LVAELK +SKEVEDSELADVAAVSAGNN+EVGNMIAEAM+KVGRKGVVT
Sbjct: 189 SLVAELKLISKEVEDSELADVAAVSAGNNHEVGNMIAEAMSKVGRKGVVT 238
>gi|224073124|ref|XP_002303983.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 330 bits (846), Expect = 1e-088
Identities = 176/208 (84%), Positives = 191/208 (91%), Gaps = 2/208 (0%)
Frame = +1
Query: 118 SNKLSSL--VSSNSFGKSLSFAQRKARFPKICAAKELHFNKDGTAIRKLQAGVNKLADLV 291
SNKLSS +S++ FG+ + ++R K+ AAKELHFNKDG+AI+KLQ GVNKLADLV
Sbjct: 30 SNKLSSFASISASRFGRPQNVVLPRSRPLKVNAAKELHFNKDGSAIKKLQTGVNKLADLV 89
Query: 292 GVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGD 471
GVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELEDPVENIGAKLVRQAA+KTNDLAGD
Sbjct: 90 GVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149
Query: 472 GTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAELKKMSKEVEDSELADVA 651
GTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKTT+ALV ELK MSKEVEDSELADVA
Sbjct: 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTRALVNELKLMSKEVEDSELADVA 209
Query: 652 AVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
AVSAGNNYEVGNMIAEAM+KVGRKGVVT
Sbjct: 210 AVSAGNNYEVGNMIAEAMSKVGRKGVVT 237
>gi|2506277|sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding
protein subunit beta, chloroplastic; AltName: Full=60 kDa chaperonin
subunit beta; AltName: Full=CPN-60 beta; Flags: Precursor
Length = 595
Score = 326 bits (835), Expect = 2e-087
Identities = 180/225 (80%), Positives = 198/225 (88%), Gaps = 2/225 (0%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLSSLVSSNSFGKSLSFAQRKARFPKICA-AKELHFNKDG 240
MASTFSAT+S +L+ + S +++ + RK R K+ A AKELHFNKDG
Sbjct: 1 MASTFSATTS-SCNLSSSAAISSFPLAAGKRNANKVVLPRKNRNVKVSAMAKELHFNKDG 59
Query: 241 TAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIG 420
+AI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELEDPVENIG
Sbjct: 60 SAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIG 119
Query: 421 AKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAE 600
AKLVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPVLITRGIEKT+KALVAE
Sbjct: 120 AKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVAE 179
Query: 601 LKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
LKKMSKEVEDSELADVAAVSAGNN+EVGNMIAEA++KVGRKGVVT
Sbjct: 180 LKKMSKEVEDSELADVAAVSAGNNHEVGNMIAEALSKVGRKGVVT 224
>gi|225442531|ref|XP_002284134.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 609
Score = 325 bits (832), Expect = 5e-087
Identities = 180/225 (80%), Positives = 195/225 (86%), Gaps = 4/225 (1%)
Frame = +1
Query: 73 TFSATSSMGSSLAPPSNKLSSL--VSSNSF-GKSLSFAQRKARFPKICA-AKELHFNKDG 240
T S++ +M S +LSS +S+NSF G+ S +K PK+ A AKEL+FNKDG
Sbjct: 15 TSSSSHTMDKKFLGSSRRLSSFASISANSFEGRKQSMVLQKRCSPKVRAMAKELYFNKDG 74
Query: 241 TAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIG 420
+AI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVAREVELEDPVENIG
Sbjct: 75 SAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIG 134
Query: 421 AKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAE 600
A+LVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPV ITRGIE TTKALVAE
Sbjct: 135 ARLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVQITRGIENTTKALVAE 194
Query: 601 LKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
LK MSKEVEDSELADVAAVSAGNNYEVG MIAEAM +VGRKGVVT
Sbjct: 195 LKLMSKEVEDSELADVAAVSAGNNYEVGYMIAEAMGQVGRKGVVT 239
>gi|226493641|ref|NP_001146890.1| ruBisCO large subunit-binding protein subunit
beta [Zea mays]
Length = 604
Score = 323 bits (827), Expect = 2e-086
Identities = 176/230 (76%), Positives = 192/230 (83%), Gaps = 6/230 (2%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLS------SLVSSNSFGKSLSFAQRKARFPKICAAKELH 225
MAS F S+ G AP L+ SLVS + R+ ++ AAKELH
Sbjct: 1 MASAFGTASTCGIKHAPAGVALAAPMKHLSLVSPSLVSLPRKMRPRRKYNFRVNAAKELH 60
Query: 226 FNKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 405
FNKDG+AIRK+Q GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELEDP
Sbjct: 61 FNKDGSAIRKMQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDP 120
Query: 406 VENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTK 585
VENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQG+ITEGVKVVAAGANPV ITRGIEKT K
Sbjct: 121 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAK 180
Query: 586 ALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ALV+EL+KMSKEVEDSELADVAAVSAGNNYE+GNMIAEAM KVGR+GVVT
Sbjct: 181 ALVSELQKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMKKVGRQGVVT 230
>gi|195630027|gb|ACG36615.1| ruBisCO large subunit-binding protein subunit beta
[Zea mays]
Length = 605
Score = 322 bits (823), Expect = 5e-086
Identities = 175/230 (76%), Positives = 191/230 (83%), Gaps = 6/230 (2%)
Frame = +1
Query: 64 MASTFSATSSMGSSLAPPSNKLS------SLVSSNSFGKSLSFAQRKARFPKICAAKELH 225
MAS F S+ G AP L+ SLVS + R+ ++ AAKELH
Sbjct: 1 MASAFGTASTCGIKHAPAGVALAAPMKHLSLVSPSLVSLPRKMRPRRKYNFRVNAAKELH 60
Query: 226 FNKDGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 405
FNKDG+AIRK+Q GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELEDP
Sbjct: 61 FNKDGSAIRKMQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDP 120
Query: 406 VENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTK 585
VENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQG+ITEGVKVVAAGANPV ITRGIEKT K
Sbjct: 121 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAK 180
Query: 586 ALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
ALV+EL+KMSKEVEDSELADVAAVSAGNNYE+GNMI EAM KVGR+GVVT
Sbjct: 181 ALVSELQKMSKEVEDSELADVAAVSAGNNYEIGNMITEAMKKVGRQGVVT 230
>gi|115466004|ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group]
Length = 601
Score = 320 bits (820), Expect = 1e-085
Identities = 177/224 (79%), Positives = 190/224 (84%), Gaps = 6/224 (2%)
Frame = +1
Query: 79 SATSSMGSSLAPPSNKLSSLVSSNSFGKSLSFAQRKARFPKIC-----AAKELHFNKDGT 243
S M + S+K S +SS S S++ R AR + C AAKEL+FNKDG+
Sbjct: 9 STVGLMAAPTGIVSDKKPSSLSSVS-SVSVASRPRNARLQRKCNFRVKAAKELYFNKDGS 67
Query: 244 AIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA 423
AI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA
Sbjct: 68 AIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA 127
Query: 424 KLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAEL 603
KLVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPV ITRGIEKT KALV EL
Sbjct: 128 KLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEEL 187
Query: 604 KKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
KK+SKEVEDSELADVAAVSAGNNYE+GNMIAEAM+KVGRKGVVT
Sbjct: 188 KKLSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVT 231
>gi|222634842|gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryza sativa
Japonica Group]
Length = 588
Score = 320 bits (820), Expect = 1e-085
Identities = 177/224 (79%), Positives = 190/224 (84%), Gaps = 6/224 (2%)
Frame = +1
Query: 79 SATSSMGSSLAPPSNKLSSLVSSNSFGKSLSFAQRKARFPKIC-----AAKELHFNKDGT 243
S M + S+K S +SS S S++ R AR + C AAKEL+FNKDG+
Sbjct: 9 STVGLMAAPTGIVSDKKPSSLSSVS-SVSVASRPRNARLQRKCNFRVKAAKELYFNKDGS 67
Query: 244 AIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA 423
AI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA
Sbjct: 68 AIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA 127
Query: 424 KLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAEL 603
KLVRQAA+KTNDLAGDGTTTSVVLAQGLI EGVKVVAAGANPV ITRGIEKT KALV EL
Sbjct: 128 KLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEEL 187
Query: 604 KKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVT 735
KK+SKEVEDSELADVAAVSAGNNYE+GNMIAEAM+KVGRKGVVT
Sbjct: 188 KKLSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVT 231
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,352,524,086,339
Number of Sequences: 15229318
Number of Extensions: 1352524086339
Number of Successful Extensions: 374284986
Number of sequences better than 0.0: 0
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