BLASTX 7.6.2
Query= UN83291 /QuerySize=833
(832 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30690260|ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase... 61 2e-007
gi|79328737|ref|NP_001031943.1| DEAD-box ATP-dependent RNA helic... 61 2e-007
gi|3047077|gb|AAC13590.1| contains similarity to the conserved C... 61 2e-007
gi|3775987|emb|CAA09196.1| RNA helicase [Arabidopsis thaliana] 61 2e-007
gi|22135801|gb|AAM91087.1| At5g26740 [Arabidopsis thaliana] 61 2e-007
gi|297812857|ref|XP_002874312.1| RNA helicase [Arabidopsis lyrat... 61 2e-007
gi|334187954|ref|NP_001190402.1| DEAD-box ATP-dependent RNA heli... 61 2e-007
gi|84468310|dbj|BAE71238.1| hypothetical protein [Trifolium prat... 56 5e-006
gi|212274773|ref|NP_001130659.1| hypothetical protein LOC1001917... 55 9e-006
gi|195612018|gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays] 55 9e-006
>gi|30690260|ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis
thaliana]
Length = 747
Score = 61 bits (147), Expect = 2e-007
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I R +LGEVEYLVLDEADQMLAVGFEEAVESILE +
Sbjct: 243 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
>gi|79328737|ref|NP_001031943.1| DEAD-box ATP-dependent RNA helicase 3
[Arabidopsis thaliana]
Length = 748
Score = 61 bits (147), Expect = 2e-007
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I R +LGEVEYLVLDEADQMLAVGFEEAVESILE +
Sbjct: 243 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
>gi|3047077|gb|AAC13590.1| contains similarity to the conserved C-terminal
domain of helicases (Pfam: helicase_C.hmm, score: 90.11), similar to
DEAD-box h [Arabidopsis thaliana]
Length = 477
Score = 61 bits (147), Expect = 2e-007
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I R +LGEVEYLVLDEADQMLAVGFEEAVESILE +
Sbjct: 245 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 282
>gi|3775987|emb|CAA09196.1| RNA helicase [Arabidopsis thaliana]
Length = 748
Score = 61 bits (147), Expect = 2e-007
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I R +LGEVEYLVLDEADQMLAVGFEEAVESILE +
Sbjct: 243 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
>gi|22135801|gb|AAM91087.1| At5g26740 [Arabidopsis thaliana]
Length = 748
Score = 61 bits (147), Expect = 2e-007
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I R +LGEVEYLVLDEADQMLAVGFEEAVESILE +
Sbjct: 243 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
>gi|297812857|ref|XP_002874312.1| RNA helicase [Arabidopsis lyrata subsp.
lyrata]
Length = 748
Score = 61 bits (147), Expect = 2e-007
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I R +LGEVEYLVLDEADQMLAVGFEEAVESILE +
Sbjct: 243 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
>gi|334187954|ref|NP_001190402.1| DEAD-box ATP-dependent RNA helicase 3
[Arabidopsis thaliana]
Length = 655
Score = 61 bits (147), Expect = 2e-007
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I R +LGEVEYLVLDEADQMLAVGFEEAVESILE +
Sbjct: 150 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 187
>gi|84468310|dbj|BAE71238.1| hypothetical protein [Trifolium pratense]
Length = 402
Score = 56 bits (134), Expect = 5e-006
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I+ R +L E++YLVLDEADQMLAVGFEE VESILE +
Sbjct: 24 INGRSLQLSEIQYLVLDEADQMLAVGFEEDVESILETI 61
>gi|212274773|ref|NP_001130659.1| hypothetical protein LOC100191761 [Zea mays]
Length = 598
Score = 55 bits (132), Expect = 9e-006
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I+ +LGEV+YLVLDEADQMLAVGFEE VE+IL+Q+
Sbjct: 82 INGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQL 119
>gi|195612018|gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]
Length = 744
Score = 55 bits (132), Expect = 9e-006
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 489 ISSRQRELGEVEYLVLDEADQMLAVGFEEAVESILEQV 602
I+ +LGEV+YLVLDEADQMLAVGFEE VE+IL+Q+
Sbjct: 227 INGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQL 264
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,352,524,086,339
Number of Sequences: 15229318
Number of Extensions: 1352524086339
Number of Successful Extensions: 374284986
Number of sequences better than 0.0: 0
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