BLASTX 7.6.2
Query= UN83438 /QuerySize=854
(853 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/... 364 5e-101
TAIR9_protein||AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PR... 285 3e-077
TAIR9_protein||AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PR... 220 9e-058
TAIR9_protein||AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PR... 194 7e-050
TAIR9_protein||AT4G15475.1 | Symbols: | F-box family protein (F... 66 3e-011
TAIR9_protein||AT5G01720.1 | Symbols: | F-box family protein (F... 53 2e-007
>TAIR9_protein||AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/ASK1
INTERACTING PROTEIN 2); ubiquitin-protein ligase |
chr5:26831677-26833260 REVERSE
Length = 528
Score = 364 bits (933), Expect = 5e-101
Identities = 188/227 (82%), Positives = 197/227 (86%), Gaps = 12/227 (5%)
Frame = -3
Query: 851 AERCKLLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKL 672
AERCKLLRKLHIDGWRTN+IGDEGLL+VA+HCLNLQELVLIGVNATH S++AIASNCEKL
Sbjct: 309 AERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKL 368
Query: 671 ERLALCGSGTIGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCK 492
ERLALCGSGTIGDTEIACIA+KCGALRKFCIKGC VSD GIEALA GCPNLVKLKVKKCK
Sbjct: 369 ERLALCGSGTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPNLVKLKVKKCK 428
Query: 491 VVTGEIGEWLREQRRTLVVSMDGDETEATVAVDGESETAVVEEARV---GGAAEIVGSGN 321
VVTGEIG+WLREQRRTLVVSMDGDETEA V VDGE ET VVEE RV GG +GS N
Sbjct: 429 VVTGEIGDWLREQRRTLVVSMDGDETEAVVVVDGEVET-VVEEPRVAQAGGIVAEIGSSN 487
Query: 320 GGGGGSNNGGSRLATIRSKFGFFAGRNLVSCRFRRWSHPNNDNGSSS 180
GG GGSRLA IRSK GF AGRNLV+C FRRWSH NDN SSS
Sbjct: 488 GG------GGSRLAMIRSKLGFLAGRNLVTCTFRRWSH--NDNASSS 526
>TAIR9_protein||AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PROTEINE 2);
ubiquitin-protein ligase | chr3:18572788-18574356 FORWARD
Length = 523
Score = 285 bits (728), Expect = 3e-077
Identities = 142/213 (66%), Positives = 166/213 (77%), Gaps = 2/213 (0%)
Frame = -3
Query: 848 ERCKLLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLE 669
ERCKLLRKLHIDGWR +IGD+GL++VA+HCLNLQELVLIGV+AT+ S+SAIASNC+KLE
Sbjct: 304 ERCKLLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLE 363
Query: 668 RLALCGSGTIGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCKV 489
RLALCGSGTIGD EI CIA+KC LRKFCIKGC +SD+G++ALA GCP LVKLKVKKC +
Sbjct: 364 RLALCGSGTIGDAEIGCIAEKCVTLRKFCIKGCLISDVGVQALALGCPKLVKLKVKKCSL 423
Query: 488 VTGEIGEWLREQRRTLVVSMDGDETEATVAVDGESETAVVEEARVGGAAEIVGSGNGGGG 309
VTGE+ EWLRE+R TLVVSMD DET VDG + V E V A V G+GG G
Sbjct: 424 VTGEVREWLRERRMTLVVSMDDDETNGVGLVDGGDQR--VLETVVEEEAPPVIDGDGGLG 481
Query: 308 GSNNGGSRLATIRSKFGFFAGRNLVSCRFRRWS 210
+ G LA +++K G AGRNLV+C RRWS
Sbjct: 482 VAGGGRLGLAILKTKLGLLAGRNLVACTLRRWS 514
>TAIR9_protein||AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PROTEINE 3);
ubiquitin-protein ligase | chr4:4197847-4199511 REVERSE
Length = 555
Score = 220 bits (560), Expect = 9e-058
Identities = 118/215 (54%), Positives = 147/215 (68%), Gaps = 11/215 (5%)
Frame = -3
Query: 851 AERCKLLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKL 672
AERCKLLRKLHIDGW+TN+IGDEGL+ VA++C NLQELVLIGVN T S+ AI SNC L
Sbjct: 338 AERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVNPTKLSLEAIVSNCLNL 397
Query: 671 ERLALCGSGTIGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCK 492
ERLALCGS T+GDTE+ CIA+KC ALRK CIK C ++D GI+AL GCPNL+K+KVKKC+
Sbjct: 398 ERLALCGSDTVGDTELCCIAEKCLALRKLCIKNCPITDDGIKALGNGCPNLLKVKVKKCR 457
Query: 491 VVTGEIGEWLREQRRTLVVSMDGDET---EATVAVDGESETAVVEEARVGGAAEIVGSGN 321
VT + + LR++R LVV++D ET E +V G E A VE +G +
Sbjct: 458 GVTTQGADLLRKRRALLVVNLDAPETPIVEGSVGEGGAQENA-VEFPPSRLQIPTIGLAS 516
Query: 320 GGGGGSNNGGSRLATIRSKFGFFAGRNLVSCRFRR 216
G SR ++ + + GF + RN VSC RR
Sbjct: 517 G-------STSRSSSFKLRLGFLSQRNFVSCALRR 544
>TAIR9_protein||AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PROTEINE 1);
ubiquitin-protein ligase | chr1:17276103-17277659 REVERSE
Length = 519
Score = 194 bits (492), Expect = 7e-050
Identities = 107/216 (49%), Positives = 136/216 (62%), Gaps = 11/216 (5%)
Frame = -3
Query: 851 AERCKLLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKL 672
AE+CK LRKLHIDGW+ N IGDEGL+AVA+ C LQELVLIGVN T S+ +A+ C L
Sbjct: 305 AEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLAAKCLNL 364
Query: 671 ERLALCGSGTIGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCK 492
ERLALCG T GD E++CIA KC ALRK CIK C +SD+GIE LA GCP L K+K+KKCK
Sbjct: 365 ERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCK 424
Query: 491 VVTGEIGEWLREQRRTLVVSMDGDETE----ATVAVDGESETAVVEEARVGGAAEIVGSG 324
V G +WLR R L V+ D E E A+ V G S+ +E ++ ++I+ S
Sbjct: 425 GVLGGCADWLRTVRPMLSVNADTMEQEHEEAASNDVVGGSQENGIEFPQLN--SQIMASS 482
Query: 323 NGGGGGSNNGGSRLATIRSKFGFFAGRNLVSCRFRR 216
+ +G +S G F+G +LV C R+
Sbjct: 483 IASSSRNRSG-----YFKSGIGLFSGMSLVPCTSRQ 513
>TAIR9_protein||AT4G15475.1 | Symbols: | F-box family protein (FBL4) |
chr4:8845927-8848701 FORWARD
Length = 611
Score = 66 bits (159), Expect = 3e-011
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Frame = -3
Query: 842 CKLLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLERL 663
CKLL L++D + I D+GL+AVA+ C L+ L L V+ T + +A+ C LERL
Sbjct: 243 CKLLEVLYLD---SEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERL 299
Query: 662 ALCGSGTIGDTEIACIAKKCGALRKFCIKGC-AVSDLGIEALAAGCPNLVKLKVKKC 495
AL D + I K L+ + C VS G+EA+A GC L ++++ C
Sbjct: 300 ALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGC 356
>TAIR9_protein||AT5G01720.1 | Symbols: | F-box family protein (FBL3) |
chr5:267118-270391 REVERSE
Length = 666
Score = 53 bits (125), Expect = 2e-007
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = -3
Query: 818 IDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLERLALCGSGTI 639
+D R+ GLL +A C+NL E+ L + +A+ + LERL L +
Sbjct: 104 LDLSRSGSFSAAGLLRLALKCVNLVEIDLSNATEMRDADAAVVAEARSLERLKLGRCKML 163
Query: 638 GDTEIACIAKKCGALRKFCIKGC-AVSDLGIEALAAGCPNL 519
D I CIA C L +K C V DLG+ LA C ++
Sbjct: 164 TDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDI 204
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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