BLASTX 7.6.2
Query= UN83450 /QuerySize=676
(675 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 4e-027
TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 4e-027
TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 4e-027
TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 4e-027
TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2... 71 5e-013
TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2... 71 5e-013
>TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270098
FORWARD
Length = 121
Score = 118 bits (294), Expect = 4e-027
Identities = 55/60 (91%), Positives = 56/60 (93%), Gaps = 1/60 (1%)
Frame = -2
Query: 665 MAMVSGRRFTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QPQGADGFYD 489
MAMVSGRR TLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Score = 48 bits (112), Expect = 6e-006
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -2
Query: 488 GEVDVADLLPESFDFDDMEDLFVAD--EFD 405
G +DVADLLPESFDFDDMED F D EFD
Sbjct: 69 GHIDVADLLPESFDFDDMEDFFDTDAAEFD 98
>TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 118 bits (294), Expect = 4e-027
Identities = 55/60 (91%), Positives = 56/60 (93%), Gaps = 1/60 (1%)
Frame = -2
Query: 665 MAMVSGRRFTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QPQGADGFYD 489
MAMVSGRR TLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Score = 82 bits (200), Expect = 3e-016
Identities = 39/51 (76%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = -2
Query: 383 GLGKDGEMVRRSRGNRSPKLIVEPAKYAEKPAKWANQRV-AVPRNIPQPR* 234
G GK+GEMV++S GNRSP+ IVEPAKYAEKPAKW NQRV A PRNI QPR*
Sbjct: 114 GFGKNGEMVKKSSGNRSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR* 164
Score = 48 bits (112), Expect = 6e-006
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -2
Query: 488 GEVDVADLLPESFDFDDMEDLFVAD--EFD 405
G +DVADLLPESFDFDDMED F D EFD
Sbjct: 69 GHIDVADLLPESFDFDDMEDFFDTDAAEFD 98
>TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 118 bits (294), Expect = 4e-027
Identities = 55/60 (91%), Positives = 56/60 (93%), Gaps = 1/60 (1%)
Frame = -2
Query: 665 MAMVSGRRFTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QPQGADGFYD 489
MAMVSGRR TLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Score = 82 bits (200), Expect = 3e-016
Identities = 39/51 (76%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = -2
Query: 383 GLGKDGEMVRRSRGNRSPKLIVEPAKYAEKPAKWANQRV-AVPRNIPQPR* 234
G GK+GEMV++S GNRSP+ IVEPAKYAEKPAKW NQRV A PRNI QPR*
Sbjct: 114 GFGKNGEMVKKSSGNRSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR* 164
Score = 48 bits (112), Expect = 6e-006
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -2
Query: 488 GEVDVADLLPESFDFDDMEDLFVAD--EFD 405
G +DVADLLPESFDFDDMED F D EFD
Sbjct: 69 GHIDVADLLPESFDFDDMEDFFDTDAAEFD 98
>TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 118 bits (294), Expect = 4e-027
Identities = 55/60 (91%), Positives = 56/60 (93%), Gaps = 1/60 (1%)
Frame = -2
Query: 665 MAMVSGRRFTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QPQGADGFYD 489
MAMVSGRR TLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Score = 82 bits (200), Expect = 3e-016
Identities = 39/51 (76%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = -2
Query: 383 GLGKDGEMVRRSRGNRSPKLIVEPAKYAEKPAKWANQRV-AVPRNIPQPR* 234
G GK+GEMV++S GNRSP+ IVEPAKYAEKPAKW NQRV A PRNI QPR*
Sbjct: 114 GFGKNGEMVKKSSGNRSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR* 164
Score = 48 bits (112), Expect = 6e-006
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -2
Query: 488 GEVDVADLLPESFDFDDMEDLFVAD--EFD 405
G +DVADLLPESFDFDDMED F D EFD
Sbjct: 69 GHIDVADLLPESFDFDDMEDFFDTDAAEFD 98
>TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 144
Score = 71 bits (173), Expect = 5e-013
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Frame = -2
Query: 662 AMVSGRRFTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWISQPQ-----GADG 498
A + R TLNP+AP+F P R+VEDFSP+WW LVTTS W+ D+W+S G D
Sbjct: 3 ATIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDD 62
Query: 497 FYDGEVDVADLLPES 453
F E + +++ S
Sbjct: 63 FSVMEEEFEEMIASS 77
>TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 142
Score = 71 bits (173), Expect = 5e-013
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Frame = -2
Query: 662 AMVSGRRFTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWISQPQ-----GADG 498
A + R TLNP+AP+F P R+VEDFSP+WW LVTTS W+ D+W+S G D
Sbjct: 3 ATIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDD 62
Query: 497 FYDGEVDVADLLPES 453
F E + +++ S
Sbjct: 63 FSVMEEEFEEMIASS 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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