BLASTX 7.6.2
Query= UN83626 /QuerySize=351
(350 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea] 169 2e-040
gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 p... 117 7e-025
gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thal... 111 5e-023
gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidop... 111 5e-023
gi|225444665|ref|XP_002277239.1| PREDICTED: hypothetical protein... 55 3e-006
gi|224142779|ref|XP_002324728.1| predicted protein [Populus tric... 55 3e-006
gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 ... 54 4e-006
gi|224068502|ref|XP_002326133.1| predicted protein [Populus tric... 54 7e-006
gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ri... 54 7e-006
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 169 bits (426), Expect = 2e-040
Identities = 85/105 (80%), Positives = 92/105 (87%), Gaps = 7/105 (6%)
Frame = +1
Query: 46 MVEPLPITRRRFLSSHRSLVTVFWIAAFASLFIWQSRGR----GGSSLYRGGGGLSSVFW 213
MVEPLPITRRRFLSSH+SLVTVFWIAAFASLFIWQSRGR GG+SLYR G LSSVFW
Sbjct: 1 MVEPLPITRRRFLSSHKSLVTVFWIAAFASLFIWQSRGRGGGGGGASLYRVNGSLSSVFW 60
Query: 214 WTTTTTLTTTRATNSGEFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
WT T TTT ++++GEFPRLRP +FNLTDFGAVGDGVTVNTEAF
Sbjct: 61 WTAT---TTTTSSDAGEFPRLRPVSFNLTDFGAVGDGVTVNTEAF 102
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein
[Arabidopsis lyrata subsp. lyrata]
Length = 487
Score = 117 bits (291), Expect = 7e-025
Identities = 66/98 (67%), Positives = 72/98 (73%), Gaps = 13/98 (13%)
Frame = +1
Query: 55 PLPITRRRFLSSHRSLVTVFWIAAFASLFIWQSRGRGGSSLYRGGGGLSSVFWWTTTTTL 234
PLP RRFLSSH+SLVTVFWIA FASLFIWQ G ++LY G SVFW ++TTT
Sbjct: 4 PLP---RRFLSSHKSLVTVFWIATFASLFIWQF-GGVSTNLYTG----FSVFWSSSTTTT 55
Query: 235 TTTRATNSGEFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
SGEFP+LRP FNLTDFGAVGDGVTVNTEAF
Sbjct: 56 AA-----SGEFPKLRPVVFNLTDFGAVGDGVTVNTEAF 88
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 111 bits (275), Expect = 5e-023
Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 9/92 (9%)
Frame = +1
Query: 73 RRFLSSHRSLVTVFWIAAFASLFIWQSRGRGGSSLYRGGGGLSSVFWWTTTTTLTTTRAT 252
RRFLSSH+SL+TVFWIA FASLFIWQ G ++LY G S+FW +++TT T
Sbjct: 3 RRFLSSHKSLITVFWIATFASLFIWQF-GGVSTNLYSG----FSLFWSSSSTTTTVF--- 54
Query: 253 NSGEFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
SG FP+LRP FNLTDFGAVGDGVT+NTEAF
Sbjct: 55 -SGGFPKLRPVVFNLTDFGAVGDGVTINTEAF 85
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 111 bits (275), Expect = 5e-023
Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 9/92 (9%)
Frame = +1
Query: 73 RRFLSSHRSLVTVFWIAAFASLFIWQSRGRGGSSLYRGGGGLSSVFWWTTTTTLTTTRAT 252
RRFLSSH+SL+TVFWIA FASLFIWQ G ++LY G S+FW +++TT T
Sbjct: 3 RRFLSSHKSLITVFWIATFASLFIWQF-GGVSTNLYSG----FSLFWSSSSTTTTVF--- 54
Query: 253 NSGEFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
SG FP+LRP FNLTDFGAVGDGVT+NTEAF
Sbjct: 55 -SGGFPKLRPVVFNLTDFGAVGDGVTINTEAF 85
>gi|225444665|ref|XP_002277239.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 493
Score = 55 bits (130), Expect = 3e-006
Identities = 29/52 (55%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 199 SSVFWWTTTTT--LTTTRATNSGEFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
+SVF W L T R + PRLRP +NLTDFG VGD VTVNTEAF
Sbjct: 43 ASVFVWQRNIVEGLLTFRRAPARPLPRLRPAVYNLTDFGGVGDSVTVNTEAF 94
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 55 bits (130), Expect = 3e-006
Identities = 30/53 (56%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 199 SSVFWWTTTTTLTTTRATNSG---EFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
+SVF W A G P+LRP AFNLTDFGAVGDGVT+NTEAF
Sbjct: 44 ASVFLWQRNAVRGGFAAFWHGPVRPIPKLRPVAFNLTDFGAVGDGVTLNTEAF 96
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis
vinifera]
Length = 509
Score = 54 bits (129), Expect = 4e-006
Identities = 29/52 (55%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 199 SSVFWWTTTTT--LTTTRATNSGEFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
+SVF W L T R + PRLRP +NLTDFG VGD VTVNTEAF
Sbjct: 43 ASVFVWQRNIVEGLLTFRRAPARPLPRLRPAVYNLTDFGGVGDXVTVNTEAF 94
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 54 bits (127), Expect = 7e-006
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 268 PRLRPFAFNLTDFGAVGDGVTVNTEAF 348
P+LRP AFNLTDFGAVGDG TVNTEAF
Sbjct: 70 PQLRPVAFNLTDFGAVGDGATVNTEAF 96
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus
communis]
Length = 494
Score = 54 bits (127), Expect = 7e-006
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +1
Query: 199 SSVFWWTTTTT----LTTTRATNSGEFPRLRPFAFNLTDFGAVGDGVTVNTEAF 348
+SVF W +A+ P+LRP AFNLTDFG VGDGVT+NTEAF
Sbjct: 42 ASVFVWQRNVVGDGFAVFFKASPMRPMPKLRPVAFNLTDFGGVGDGVTLNTEAF 95
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,367,538,151,842
Number of Sequences: 15229318
Number of Extensions: 1367538151842
Number of Successful Extensions: 382998505
Number of sequences better than 0.0: 0
|
