BLASTX 7.6.2
Query= UN83928 /QuerySize=694
(693 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G06930.1 | Symbols: | LOCATED IN: chloroplast... 279 1e-075
TAIR9_protein||AT3G57780.1 | Symbols: | EXPRESSED IN: 20 plant ... 144 5e-035
TAIR9_protein||AT2G42320.1 | Symbols: | nucleolar protein gar2-... 141 4e-034
TAIR9_protein||AT2G42320.2 | Symbols: | nucleolar protein gar2-... 141 4e-034
TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular... 111 7e-025
TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular... 100 1e-021
TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein | chr5:... 97 8e-021
>TAIR9_protein||AT5G06930.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
15 plant structures; EXPRESSED DURING: 7 growth stages; BEST
Arabidopsis thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3144 Blast hits to 1363 proteins in 247
species: Archae - 2; Bacteria - 721; Metazoa - 835; Fungi - 297; Plants
- 80; Viruses - 10; Other Eukaryotes - 1199 (source: NCBI BLink). |
chr5:2145139-2147849 FORWARD
Length = 724
Score = 279 bits (713), Expect = 1e-075
Identities = 139/183 (75%), Positives = 152/183 (83%)
Frame = +1
Query: 4 RLLTDIFEIDDDHSEERGDETFKPFHLLNELSDLLMLPKEMLVDSSTRDEVCPSIGLSLI 183
RLLTDIF ID + +RGDETFKPFHLLNELSDLLMLPKEM VDSSTRDEVCPSIGLSLI
Sbjct: 540 RLLTDIFGIDVEQKMQRGDETFKPFHLLNELSDLLMLPKEMFVDSSTRDEVCPSIGLSLI 599
Query: 184 KRILCNFTPDEFCPYPVPGTVLEELNAQSIIERRSSSGDATRDFPRQVDPVEYCLPSSAQ 363
KRI+CNFTPDEFCPYPVPGTVLEELNAQSI+E RS S D R FPRQV+PV Y PS +
Sbjct: 600 KRIVCNFTPDEFCPYPVPGTVLEELNAQSILENRSLSRDTARGFPRQVNPVSYSPPSCSH 659
Query: 364 LTDMVAEFSDNLKVSMIQNIVYNNNEEVETSRSPPYYKIIKGVEEKDNLSFSPTNERYRL 543
LTD+VAEFS LK+SM Y++NE+VET RSPPYY +IKG KDNL+ S TNERYRL
Sbjct: 660 LTDIVAEFSVKLKLSMTHKNGYSSNEKVETPRSPPYYNVIKGAVAKDNLNLSETNERYRL 719
Query: 544 LGE 552
LGE
Sbjct: 720 LGE 722
>TAIR9_protein||AT3G57780.1 | Symbols: | EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3024
Blast hits to 2177 proteins in 255 species: Archae - 2; Bacteria - 181;
Metazoa - 988; Fungi - 289; Plants - 172; Viruses - 72; Other
Eukaryotes - 1320 (source: NCBI BLink). | chr3:21399766-21402326
REVERSE
Length = 671
Score = 144 bits (363), Expect = 5e-035
Identities = 84/156 (53%), Positives = 104/156 (66%), Gaps = 10/156 (6%)
Frame = +1
Query: 10 LTDIFEIDDDHSEERGD--ETFKPFHLLNELSDLLMLPKEMLVDSSTRDEVCPSIGLSLI 183
L ++F I+ S E D E+ K F LLNELSDLLMLPK+ML+D STR+EVCPSI L+LI
Sbjct: 476 LAEMFSINTRDSVEENDPIESEKSFSLLNELSDLLMLPKDMLMDRSTREEVCPSISLALI 535
Query: 184 KRILCNFTPDEFCPYPVPGTVLEELNAQSIIERRSSSGDATRDFPRQVDPVEYCLPSSAQ 363
KRILCNFTPDEFCP VPG VLEELN +SI E++ S FP PV Y PSS
Sbjct: 536 KRILCNFTPDEFCPDDVPGAVLEELNNESISEQKLSG----VSFPYAASPVSYTPPSSTN 591
Query: 364 LTDM--VAEFSDNLKVSMIQNIVYNNNEEVETSRSP 465
+ ++ ++ S N VSMIQ Y +++E+E SP
Sbjct: 592 VAEVGDISRMSRN--VSMIQRKGYTSDDELEELDSP 625
>TAIR9_protein||AT2G42320.1 | Symbols: | nucleolar protein gar2-related |
chr2:17628102-17630657 FORWARD
Length = 670
Score = 141 bits (355), Expect = 4e-034
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 18/179 (10%)
Frame = +1
Query: 31 DDDHSEERGDETFKPFHLLNELSDLLMLPKEMLVDSSTRDEVCPSIGLSLIKRILCNFTP 210
+DDH E K F LLNELSDLLMLPK+ML++ S R+E+CPSI L LIKRILCNFTP
Sbjct: 503 EDDHVES------KAFVLLNELSDLLMLPKDMLMEISIREEICPSISLPLIKRILCNFTP 556
Query: 211 DEFCPYPVPGTVLEELN-AQSIIERRSSSGDATRDFPRQVDPVEYCLPSSAQLTDMVAEF 387
DEFCP VPG VLEELN A+SI +R+ S FP V Y PS+ + + VAE
Sbjct: 557 DEFCPDQVPGAVLEELNAAESIGDRKLSEA----SFPYAASSVSYMPPSTMDIAEKVAEA 612
Query: 388 SDNL--KVSMIQNIVYNNNEEVETSRSPPYYKIIKGVEEKDNLSFSPT-NERYRLLGEI 555
S L VSMIQ Y ++EE+E SP + V++ + + S T N RY+LL ++
Sbjct: 613 SAKLSRNVSMIQRKGYTSDEELEELDSP----LTSIVDKASDFTGSATSNARYKLLRQV 667
>TAIR9_protein||AT2G42320.2 | Symbols: | nucleolar protein gar2-related |
chr2:17628102-17630657 FORWARD
Length = 670
Score = 141 bits (355), Expect = 4e-034
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 18/179 (10%)
Frame = +1
Query: 31 DDDHSEERGDETFKPFHLLNELSDLLMLPKEMLVDSSTRDEVCPSIGLSLIKRILCNFTP 210
+DDH E K F LLNELSDLLMLPK+ML++ S R+E+CPSI L LIKRILCNFTP
Sbjct: 503 EDDHVES------KAFVLLNELSDLLMLPKDMLMEISIREEICPSISLPLIKRILCNFTP 556
Query: 211 DEFCPYPVPGTVLEELN-AQSIIERRSSSGDATRDFPRQVDPVEYCLPSSAQLTDMVAEF 387
DEFCP VPG VLEELN A+SI +R+ S FP V Y PS+ + + VAE
Sbjct: 557 DEFCPDQVPGAVLEELNAAESIGDRKLSEA----SFPYAASSVSYMPPSTMDIAEKVAEA 612
Query: 388 SDNL--KVSMIQNIVYNNNEEVETSRSPPYYKIIKGVEEKDNLSFSPT-NERYRLLGEI 555
S L VSMIQ Y ++EE+E SP + V++ + + S T N RY+LL ++
Sbjct: 613 SAKLSRNVSMIQRKGYTSDEELEELDSP----LTSIVDKASDFTGSATSNARYKLLRQV 667
>TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384
proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi
- 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI
BLink). | chr3:289218-292557 FORWARD
Length = 922
Score = 111 bits (275), Expect = 7e-025
Identities = 70/191 (36%), Positives = 106/191 (55%), Gaps = 17/191 (8%)
Frame = +1
Query: 16 DIFEI---DDDHSEERG--DETFKPFHLLNELSDLLMLPKEMLVDSSTRDEVCPSIGLSL 180
D+F I DDD S+E +++FK F+LL LSDL+MLPK+ML++SS R EVCP G L
Sbjct: 730 DLFGIDDEDDDSSDENSYVEKSFKTFNLLKALSDLMMLPKDMLLNSSVRKEVCPMFGAPL 789
Query: 181 IKRILCNFTPDEFCPYPVPGTVLEELNAQSIIERRSSSGDATRDFPRQVDPVEYCLPSSA 360
IKR+L NF PDEFCP PVP VL+ L ++ E+ +P YC PS
Sbjct: 790 IKRVLNNFVPDEFCPDPVPDAVLKSLESEEEAEK-----SIITSYPCTAPSPVYCPPSRT 844
Query: 361 QLTDMVAEFSDNL--KVSMIQNIV----YNNNEEVETSRSPPYYKIIKGV-EEKDNLSFS 519
++ ++ F ++S I++ + Y +++E++ SP +++ +K N +
Sbjct: 845 SISTIIGNFGQPQAPQLSRIRSSITRKAYTSDDELDELSSPLAVVVLQQAGSKKINNGDA 904
Query: 520 PTNERYRLLGE 552
RY+LL E
Sbjct: 905 DETIRYQLLRE 915
>TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1224 Blast hits to 385
proteins in 102 species: Archae - 2; Bacteria - 107; Metazoa - 205;
Fungi - 107; Plants - 62; Viruses - 0; Other Eukaryotes - 741 (source:
NCBI BLink). | chr3:289218-292375 FORWARD
Length = 860
Score = 100 bits (248), Expect = 1e-021
Identities = 54/98 (55%), Positives = 69/98 (70%), Gaps = 7/98 (7%)
Frame = +1
Query: 16 DIFEI---DDDHSEERG--DETFKPFHLLNELSDLLMLPKEMLVDSSTRDEVCPSIGLSL 180
D+F I DDD S+E +++FK F+LL LSDL+MLPK+ML++SS R EVCP G L
Sbjct: 730 DLFGIDDEDDDSSDENSYVEKSFKTFNLLKALSDLMMLPKDMLLNSSVRKEVCPMFGAPL 789
Query: 181 IKRILCNFTPDEFCPYPVPGTVLEELNAQSIIERRSSS 294
IKR+L NF PDEFCP PVP VL+ L ++ + RR SS
Sbjct: 790 IKRVLNNFVPDEFCPDPVPDAVLKSLESEKL--RRVSS 825
>TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein |
chr5:17349125-17352747 FORWARD
Length = 849
Score = 97 bits (240), Expect = 8e-021
Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +1
Query: 31 DDDHSEERGDETFKPFHLLNELSDLLMLPKEMLVDSSTRDEVCPSIGLSLIKRILCNFTP 210
D++ E+ E F+ FHLLN L DL+MLP +ML D STR EVCP++G +IKR+L NF P
Sbjct: 662 DNNDKEKPECEHFRLFHLLNSLGDLMMLPFKMLADKSTRKEVCPTLGPPIIKRVLRNFVP 721
Query: 211 DEFCPYPVPGTVLEELNAQSIIERRSSSGDATRDFPRQVDPVEYCLPSSAQLTDMVAEFS 390
DEF P+ +P + + LN++ + E FP P Y +PS+ + + E +
Sbjct: 722 DEFNPHRIPRRLFDVLNSEGLTE---EDNGCITVFPSAASPTVYLMPSTDSIKRFIGELN 778
Query: 391 D 393
+
Sbjct: 779 N 779
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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