Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN83942


BLASTX 7.6.2

Query= UN83942 /QuerySize=657
        (656 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|18407524|ref|NP_566123.1| uncharacterized protein [Arabidopsi...    191   8e-047
gi|297828533|ref|XP_002882149.1| hypothetical protein ARALYDRAFT...    191   8e-047
gi|21593546|gb|AAM65513.1| unknown [Arabidopsis thaliana]              189   4e-046

>gi|18407524|ref|NP_566123.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 169

 Score =  191 bits (484), Expect = 8e-047
 Identities = 112/178 (62%), Positives = 130/178 (73%), Gaps = 19/178 (10%)
 Frame = -3

Query: 654 MAKNSESSSSSKNQDQETKKENRVCEKIFRAMTSPVRTVRRLSTKPSPNHYQAEPVGVKF 475
           MAKNS S SSSK      K+ENRVCEKIFRA+TSPVRTVRR+STK SP    AE V VKF
Sbjct:   1 MAKNSSSQSSSKK-----KQENRVCEKIFRAVTSPVRTVRRISTKSSP----AEAVRVKF 51

Query: 474 SETSS--QAAKPTSKMEPLITRVETKLKTDERFSDYIKKAKLKIREVTNEGD-------N 322
           +ETS+  +AAKP +K+EP+I RV+T +KTDERF++YIKKAKLKIR +TN GD        
Sbjct:  52 AETSARPRAAKPITKVEPVIARVDTTIKTDERFTEYIKKAKLKIRAMTNVGDMMKEDAWE 111

Query: 321 AELETSETEAHDLHRQCHVLPTGSSGRRSSDHFSEYIRKAKMKL-RSSTIARANPTYK 151
              ET +T    LH    +   GSSGRRSSD FSEYI+KAKMKL  SSTIARANPT+K
Sbjct: 112 TSDETDQTRHDHLHHHVPISHVGSSGRRSSDQFSEYIKKAKMKLSSSSTIARANPTFK 169

>gi|297828533|ref|XP_002882149.1| hypothetical protein ARALYDRAFT_484001
        [Arabidopsis lyrata subsp. lyrata]

          Length = 163

 Score =  191 bits (484), Expect = 8e-047
 Identities = 108/167 (64%), Positives = 127/167 (76%), Gaps = 11/167 (6%)
 Frame = -3

Query: 633 SSSSKNQDQETKKENRVCEKIFRAMTSPVRTVRRLSTKPSPNHYQAEPVGVKFSETSSQA 454
           + +S     + K+ENRVCEK FRA+TSPVRTVRR+STKPSP    AE V VKF+ET +QA
Sbjct:   2 AKNSSESSSKKKQENRVCEKFFRAVTSPVRTVRRISTKPSP----AEAVRVKFAETPTQA 57

Query: 453 AKPTSKMEPLITRVETKLKTDERFSDYIKKAKLKIREVTNEGDNAE---LETSETE--AH 289
           AKP +KM+P+I RVET +KTDERF+DYIKKAKLKIR +TN GD  +    ETSET+   H
Sbjct:  58 AKPITKMKPVIARVETSIKTDERFTDYIKKAKLKIRAMTNVGDMMKEDAWETSETDQTRH 117

Query: 288 DLHRQCHVLPTGSSGRRSSDHFSEYIRKAKMKLR-SSTIARANPTYK 151
           D H    +   GSSG RSSD FSEYI+KAKMKLR SSTIARANPT+K
Sbjct: 118 DHHHHVPISHVGSSG-RSSDQFSEYIKKAKMKLRSSSTIARANPTFK 163

>gi|21593546|gb|AAM65513.1| unknown [Arabidopsis thaliana]

          Length = 169

 Score =  189 bits (478), Expect = 4e-046
 Identities = 111/178 (62%), Positives = 129/178 (72%), Gaps = 19/178 (10%)
 Frame = -3

Query: 654 MAKNSESSSSSKNQDQETKKENRVCEKIFRAMTSPVRTVRRLSTKPSPNHYQAEPVGVKF 475
           MAKNS S SSSK      K+ENRVCEKIFRA+TSPVRTVRR+STK SP    AE V VKF
Sbjct:   1 MAKNSSSQSSSKK-----KQENRVCEKIFRAVTSPVRTVRRISTKSSP----AEAVRVKF 51

Query: 474 SETSS--QAAKPTSKMEPLITRVETKLKTDERFSDYIKKAKLKIREVTNEGD-------N 322
           +ETS+  +AAKP +K+EP+I RV+T +KTDERF++YIKKAKLKIR +TN GD        
Sbjct:  52 AETSARPRAAKPITKVEPVIARVDTTIKTDERFTEYIKKAKLKIRAMTNVGDMMKEDAWE 111

Query: 321 AELETSETEAHDLHRQCHVLPTGSSGRRSSDHFSEYIRKAKMKL-RSSTIARANPTYK 151
              ET +T     H    +   GSSGRRSSD FSEYI+KAKMKL  SSTIARANPT+K
Sbjct: 112 TSDETDQTRHDHRHHHVPISHVGSSGRRSSDQFSEYIKKAKMKLSSSSTIARANPTFK 169

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,396,843,342,477
Number of Sequences: 15229318
Number of Extensions: 1396843342477
Number of Successful Extensions: 400319785
Number of sequences better than 0.0: 0