BLASTX 7.6.2
Query= UN83976 /QuerySize=875
(874 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsi... 396 3e-108
gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protei... 396 3e-108
gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabido... 347 2e-093
gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsi... 347 2e-093
gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabid... 322 6e-086
gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT... 315 5e-084
gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putativ... 309 4e-082
gi|224105517|ref|XP_002313840.1| predicted protein [Populus tric... 285 1e-074
gi|224067280|ref|XP_002302445.1| predicted protein [Populus tric... 277 2e-072
gi|224123466|ref|XP_002330321.1| predicted protein [Populus tric... 277 2e-072
gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, p... 277 3e-072
gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, p... 274 2e-071
gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotian... 273 2e-071
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plu... 268 1e-069
gi|224137382|ref|XP_002327112.1| predicted protein [Populus tric... 267 3e-069
gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana ta... 265 1e-068
gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis] 262 5e-068
gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis] 262 5e-068
gi|225444438|ref|XP_002266857.1| PREDICTED: hypothetical protein... 248 1e-063
gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Plat... 242 6e-062
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 396 bits (1016), Expect = 3e-108
Identities = 208/274 (75%), Positives = 221/274 (80%), Gaps = 26/274 (9%)
Frame = +2
Query: 125 MQTANNCPDSSSAAAATPAGTTP--------PPPSQQQQQQWQQHQQWMAAMAM------ 262
MQT NN + S T AGTTP PPP QQQQQQWQQ QQWMAAM
Sbjct: 1 MQTPNNNGSTDSVLPPTSAGTTPPPPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAM 60
Query: 263 -MQQQQQMMMYPPHHQYAPYNQAA--AYPQFQYA------PPYHQQQQQKRGGSSGDDVK 415
M QQQQMMMY PH QYAPYNQAA +PQFQYA +HQ QQQ RGGS GDDVK
Sbjct: 61 AMMQQQQMMMY-PHPQYAPYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVK 119
Query: 416 TLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQS 595
TLW+GDLLHWMDETYLHTCFSHTN+VSSVKVIRNKQT QSEGYGFVEFLSRSAAEE LQS
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 596 YSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAA-YQ 772
+SGVTMPNAEQPFRLNWASFSTGEKRASE NGPDLS+FVGDLAPDV+D +L+ETFA Y
Sbjct: 180 FSGVTMPNAEQPFRLNWASFSTGEKRASE-NGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238
Query: 773 SVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
SVKGAKVVIDSNTGRSKGYGFVRFGDE+ERS+A+
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAM 272
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis
thaliana]
Length = 468
Score = 396 bits (1016), Expect = 3e-108
Identities = 208/274 (75%), Positives = 221/274 (80%), Gaps = 26/274 (9%)
Frame = +2
Query: 125 MQTANNCPDSSSAAAATPAGTTP--------PPPSQQQQQQWQQHQQWMAAMAM------ 262
MQT NN + S T AGTTP PPP QQQQQQWQQ QQWMAAM
Sbjct: 1 MQTPNNNGSTDSVLPPTSAGTTPPPPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAM 60
Query: 263 -MQQQQQMMMYPPHHQYAPYNQAA--AYPQFQYA------PPYHQQQQQKRGGSSGDDVK 415
M QQQQMMMY PH QYAPYNQAA +PQFQYA +HQ QQQ RGGS GDDVK
Sbjct: 61 AMMQQQQMMMY-PHPQYAPYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVK 119
Query: 416 TLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQS 595
TLW+GDLLHWMDETYLHTCFSHTN+VSSVKVIRNKQT QSEGYGFVEFLSRSAAEE LQS
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 596 YSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAA-YQ 772
+SGVTMPNAEQPFRLNWASFSTGEKRASE NGPDLS+FVGDLAPDV+D +L+ETFA Y
Sbjct: 180 FSGVTMPNAEQPFRLNWASFSTGEKRASE-NGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238
Query: 773 SVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
SVKGAKVVIDSNTGRSKGYGFVRFGDE+ERS+A+
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAM 272
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 347 bits (888), Expect = 2e-093
Identities = 182/264 (68%), Positives = 201/264 (76%), Gaps = 17/264 (6%)
Frame = +2
Query: 125 MQTANNCPDSSSAAAATPAGTTPPPPSQQQQQQWQQHQQWMAAM-------AMMQQQQQM 283
MQT N + + + ATP PPP QQ QQQ QQ QQWMAAM MM QQQQM
Sbjct: 1 MQTTNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 60
Query: 284 MMYPPHHQYAPYNQA---AAYPQFQYAPPYHQQQQQKRGG---SSGDDVKTLWIGDLLHW 445
+MYP HQY PYNQ +PQ Y Q Q Q+ SGDDVKTLW+GDLLHW
Sbjct: 61 LMYP--HQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHW 118
Query: 446 MDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAE 625
MDETYLH+CFSHT +VSSVKVIRNK TSQSEGYGFVEFLSR+AAEEVLQ+YSG MPN++
Sbjct: 119 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 178
Query: 626 QPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFA-AYQSVKGAKVVID 802
QPFR+NWASFSTGEKRA E NGPDLS+FVGDL+PDVTD LL ETF+ Y SVK AKVVID
Sbjct: 179 QPFRINWASFSTGEKRAVE-NGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVID 237
Query: 803 SNTGRSKGYGFVRFGDESERSKAL 874
SNTGRSKGYGFVRFGDE+ERS+AL
Sbjct: 238 SNTGRSKGYGFVRFGDENERSRAL 261
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 347 bits (888), Expect = 2e-093
Identities = 182/264 (68%), Positives = 201/264 (76%), Gaps = 17/264 (6%)
Frame = +2
Query: 125 MQTANNCPDSSSAAAATPAGTTPPPPSQQQQQQWQQHQQWMAAM-------AMMQQQQQM 283
MQT N + + + ATP PPP QQ QQQ QQ QQWMAAM MM QQQQM
Sbjct: 1 MQTTNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 60
Query: 284 MMYPPHHQYAPYNQA---AAYPQFQYAPPYHQQQQQKRGG---SSGDDVKTLWIGDLLHW 445
+MYP HQY PYNQ +PQ Y Q Q Q+ SGDDVKTLW+GDLLHW
Sbjct: 61 LMYP--HQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHW 118
Query: 446 MDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAE 625
MDETYLH+CFSHT +VSSVKVIRNK TSQSEGYGFVEFLSR+AAEEVLQ+YSG MPN++
Sbjct: 119 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 178
Query: 626 QPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFA-AYQSVKGAKVVID 802
QPFR+NWASFSTGEKRA E NGPDLS+FVGDL+PDVTD LL ETF+ Y SVK AKVVID
Sbjct: 179 QPFRINWASFSTGEKRAVE-NGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVID 237
Query: 803 SNTGRSKGYGFVRFGDESERSKAL 874
SNTGRSKGYGFVRFGDE+ERS+AL
Sbjct: 238 SNTGRSKGYGFVRFGDENERSRAL 261
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata
subsp. lyrata]
Length = 435
Score = 322 bits (824), Expect = 6e-086
Identities = 168/231 (72%), Positives = 184/231 (79%), Gaps = 9/231 (3%)
Frame = +2
Query: 200 PSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAA---AYPQFQYAPPY-- 364
P QQQQQ Q+ AA MM QQQQMMMYP HQY PYNQ +PQ Y
Sbjct: 34 PPQQQQQWMAAAMQYPAAAMMMMQQQQMMMYP--HQYVPYNQGPYQHHHPQLHQYGSYQQ 91
Query: 365 HQQQQQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGY 544
HQQQ + SGDDVKTLW+GDLLHWMDETYLH+CFSHT +VSSVKVIRNK TSQSEGY
Sbjct: 92 HQQQHKPLDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGY 151
Query: 545 GFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLA 724
GF+EFLSR+AAEEVLQ+YSG MPN++QPFR+NWASFSTGEKRA E NGPDLS+FVGDL+
Sbjct: 152 GFIEFLSRAAAEEVLQNYSGSLMPNSDQPFRINWASFSTGEKRAVE-NGPDLSIFVGDLS 210
Query: 725 PDVTDTLLMET-FAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
PDVTD LL ET F Y SVK AKVVIDSNTGRSKGYGFVRFGDE+ERS+AL
Sbjct: 211 PDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRAL 261
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095
[Arabidopsis lyrata subsp. lyrata]
Length = 450
Score = 315 bits (807), Expect = 5e-084
Identities = 161/208 (77%), Positives = 175/208 (84%), Gaps = 4/208 (1%)
Frame = +2
Query: 260 MMQQQQQMMMY--PPHHQYAPYNQAAAYPQFQYAPPYHQQQQQKRGGSSGDDVKTLWIGD 433
MM Q Y + Q+ + AAAY Q Q QQ+QQ RGGS GDDVKTLW+GD
Sbjct: 71 MMYPHHQYAPYNQAAYQQHPQFQYAAAYQQQQQHHQSQQQKQQPRGGSGGDDVKTLWVGD 130
Query: 434 LLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQSYSGVTM 613
LLHWMDETYLHTCFSHTN+VSSVKVIRNKQT QSEGYGFVEFLSRSAAEE LQS+SGVTM
Sbjct: 131 LLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTM 190
Query: 614 PNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAA-YQSVKGAK 790
PNAEQPFRLNWASFSTGEKRASE NGPDLS+FVGDLAPDV+D +L+ETFA Y SVKGAK
Sbjct: 191 PNAEQPFRLNWASFSTGEKRASE-NGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAK 249
Query: 791 VVIDSNTGRSKGYGFVRFGDESERSKAL 874
VVIDSNTGRSKGYGFVRFGDE+ERS+A+
Sbjct: 250 VVIDSNTGRSKGYGFVRFGDENERSRAM 277
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis
thaliana]
Length = 392
Score = 309 bits (791), Expect = 4e-082
Identities = 160/216 (74%), Positives = 176/216 (81%), Gaps = 10/216 (4%)
Frame = +2
Query: 248 AAMAMMQQQQQMMMYPPHHQYAPYNQA---AAYPQFQYAPPYHQQQQQKRGG---SSGDD 409
AA MM QQQQM+MYP HQY PYNQ +PQ Y Q Q Q+ SGDD
Sbjct: 6 AAAMMMMQQQQMLMYP--HQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDD 63
Query: 410 VKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVL 589
VKTLW+GDLLHWMDETYLH+CFSHT +VSSVKVIRNK TSQSEGYGFVEFLSR+AAEEVL
Sbjct: 64 VKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVL 123
Query: 590 QSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFA-A 766
Q+YSG MPN++QPFR+NWASFSTGEKRA E NGPDLS+FVGDL+PDVTD LL ETF+
Sbjct: 124 QNYSGSVMPNSDQPFRINWASFSTGEKRAVE-NGPDLSVFVGDLSPDVTDVLLHETFSDR 182
Query: 767 YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
Y SVK AKVVIDSNTGRSKGYGFVRFGDE+ERS+AL
Sbjct: 183 YPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRAL 218
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 285 bits (727), Expect = 1e-074
Identities = 148/227 (65%), Positives = 174/227 (76%), Gaps = 8/227 (3%)
Frame = +2
Query: 206 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPP---HHQYAPYNQAAAYPQFQYAPPYHQQQ 376
QQQQQQW Q+ AA AM+ QQQMMMYP HH A Y+Q Q Q + +QQ
Sbjct: 9 QQQQQQWMAAMQYPAA-AMVMMQQQMMMYPQQQHHHYMAYYHQQQQQYQKQQQQYHQKQQ 67
Query: 377 QQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVE 556
+Q + S ++ KT+W+GDLLHWMDETYLH CFSHT +VSSVK+IRNKQT Q EGYGFVE
Sbjct: 68 KQLQQQGSNEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVE 127
Query: 557 FLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVT 736
F S +AAE+VLQSYSG MPN +QPFRLNWASF+ GE+RA + G DLS+FVGDLA DVT
Sbjct: 128 FYSHAAAEKVLQSYSGSMMPNTDQPFRLNWASFA-GERRA--DAGSDLSIFVGDLAADVT 184
Query: 737 DTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
D +L ETFA Y SVKGAKVV DSNTGRSKGYGFVRFGDE+E+++A+
Sbjct: 185 DAMLQETFATKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTRAI 231
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 277 bits (708), Expect = 2e-072
Identities = 145/235 (61%), Positives = 175/235 (74%), Gaps = 12/235 (5%)
Frame = +2
Query: 182 GTTPPPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQ---Y 352
G PPPP QQQQW Q +AAM M Q PP Y A AY Q+Q +
Sbjct: 22 GQQPPPP--PQQQQWMPMQYPVAAMVMQHMPPQHYGLPPPQHYM---AATAYHQYQHHHH 76
Query: 353 APPYHQQQQQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQ 532
P QQQQQ+R GSSGD+ KT+ IGDL HWMDE YLHTCF+ T +++S+KVIR+KQT
Sbjct: 77 LPHVQQQQQQQREGSSGDN-KTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGL 135
Query: 533 SEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFV 712
SEGYGFVEF + + AE+VLQ+Y G+ MPN EQPFRLNWA+FSTG+KR+ +N PDLS+FV
Sbjct: 136 SEGYGFVEFFTHATAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRS--DNTPDLSIFV 193
Query: 713 GDLAPDVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
GDLA DVTD+LL ETFA+ YQSVK AKVV D+NTGRSKGYGFVRFGD++ER++A+
Sbjct: 194 GDLAADVTDSLLQETFASKYQSVKSAKVVFDANTGRSKGYGFVRFGDDTERTQAM 248
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 277 bits (707), Expect = 2e-072
Identities = 143/214 (66%), Positives = 166/214 (77%), Gaps = 8/214 (3%)
Frame = +2
Query: 248 AAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQY---APPYHQ-QQQQKRGGSSGDDVK 415
AAMAMMQQQ M + HH Y Y Q + QY YHQ QQ+Q + S ++ K
Sbjct: 6 AAMAMMQQQMMMYPHQQHHHYMAYYQQQQHQHQQYQNKQQQYHQKQQKQLQQQGSNEEAK 65
Query: 416 TLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQS 595
T+W+GDLLHWMDE YLH CFSHT +VSSVK+IRNKQT Q EGYGFVEF SR+AAE+VLQS
Sbjct: 66 TIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKVLQS 125
Query: 596 YSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAA-YQ 772
YSG MPN EQPFRLNWASF+ GE+RA + G DLS+FVGDLA DVTD++L ETFA Y
Sbjct: 126 YSGSMMPNTEQPFRLNWASFA-GERRA--DPGSDLSIFVGDLAADVTDSMLQETFAGKYP 182
Query: 773 SVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
SVKGAKVVIDSNTGRSKGYGFVRFGDE+E+++A+
Sbjct: 183 SVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAM 216
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative
[Ricinus communis]
Length = 438
Score = 277 bits (706), Expect = 3e-072
Identities = 144/229 (62%), Positives = 172/229 (75%), Gaps = 7/229 (3%)
Frame = +2
Query: 194 PPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYP-PHHQYAPYNQAAAYPQFQYAPPYHQ 370
P QQQQQQW Q+ AA AM+ QQ MMMYP HH Y Y Q Q+ H+
Sbjct: 34 PHMQQQQQQQWMAAMQYPAA-AMVMMQQHMMMYPQQHHPYMGYYQQQQQYHKQHYQKQHK 92
Query: 371 QQQQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGF 550
QQQ++ + +D KT+W+GDLLHWMDETYLH+CFSHT +V+SVKVIRNKQT Q EGYGF
Sbjct: 93 PQQQQQHVPT-EDSKTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGF 151
Query: 551 VEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPD 730
+EF S + AE+VLQ+Y+G MPNA+QPFRLNWASF+ GE+R G DLS+FVGDLA D
Sbjct: 152 IEFYSHATAEKVLQNYNGSMMPNADQPFRLNWASFA-GERRT--ETGSDLSIFVGDLAAD 208
Query: 731 VTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
VTD +L ETF++ Y SVKGAKVV D NTGRSKGYGFVRFGDE+ERS+A+
Sbjct: 209 VTDAMLQETFSSKYLSVKGAKVVTDLNTGRSKGYGFVRFGDENERSRAM 257
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative
[Ricinus communis]
Length = 443
Score = 274 bits (699), Expect = 2e-071
Identities = 137/235 (58%), Positives = 166/235 (70%), Gaps = 9/235 (3%)
Frame = +2
Query: 191 PPP---PSQQQQQQWQQHQQWMAAMAMMQQQQQMMMY---PPHHQYAPYNQAAAYPQFQY 352
PPP P QQQQQW Q AAM M Q Y PP H Y+Q + +
Sbjct: 29 PPPAPQPQSQQQQQWMAMQYPAAAMVMQHQMLPPQHYAPPPPQHYMTAYHQYHHHHPHPH 88
Query: 353 APPYHQQQQQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQ 532
P H Q Q GG G + +T+WIGDL HWMDE YLHTCF+ T ++ S+KVIRNKQT
Sbjct: 89 QPQQHHQNQGSSGGGGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGL 148
Query: 533 SEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFV 712
SEGYGFVEF + + AE+VLQ+Y+G+ MPN EQPFRLNWA+FSTG+KR+ +N PDLS+FV
Sbjct: 149 SEGYGFVEFYTHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRS--DNAPDLSIFV 206
Query: 713 GDLAPDVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
GDLA DVTD+LL ETF + Y SVK AKVV D+NTGRSKGYGFVRFGD++ER++A+
Sbjct: 207 GDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAM 261
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 273 bits (698), Expect = 2e-071
Identities = 150/232 (64%), Positives = 170/232 (73%), Gaps = 15/232 (6%)
Frame = +2
Query: 206 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPY--HQQQQ 379
QQQQQQ QQ QQWM AM QQQ M YP Q Y Q QY P Y HQQQQ
Sbjct: 65 QQQQQQQQQQQQWM-AMQQYQQQWMAMQYPA--AAMAMQQQMMYGQ-QYMPYYQQHQQQQ 120
Query: 380 QK------RGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEG 541
QK + SS +D KT+WIGDL WMDE+YLH+CFS +V SVK+IRNKQT QSE
Sbjct: 121 QKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSER 180
Query: 542 YGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDL 721
YGFVEF + +AAE+VLQSY+G MPNAEQPFRLNWA FSTGEKRA G D S+FVGDL
Sbjct: 181 YGFVEFNTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRA--ETGSDFSIFVGDL 238
Query: 722 APDVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
A DVTDT+L +TFA+ Y S+KGAKVV+D+NTG SKGYGFVRFGDESERS+A+
Sbjct: 239 ASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAM 290
>gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 268 bits (683), Expect = 1e-069
Identities = 144/231 (62%), Positives = 165/231 (71%), Gaps = 13/231 (5%)
Frame = +2
Query: 206 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPYHQQQQQK 385
QQQQQQ QQ QQ AM QQQ M YP Q Y Q QY P Y Q QQQ+
Sbjct: 11 QQQQQQHQQQQQQWLAMQQYQQQWMAMQYPA--AAMAMQQQMMYGQ-QYMPYYQQHQQQQ 67
Query: 386 RG-------GSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGY 544
+ SS +D KT+WIGDL WMDE+YLH+CFS +V SVK+IRNKQT QSE Y
Sbjct: 68 KMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERY 127
Query: 545 GFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLA 724
GFVEF + +AAE+VLQSY+G MPN EQPFRLNWA FSTGEKRA G D S+FVGDLA
Sbjct: 128 GFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRA--ETGSDFSIFVGDLA 185
Query: 725 PDVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
DVTDT+L +TFA+ Y S+KGAKVV+D+NTG SKGYGFVRFGDESERS+A+
Sbjct: 186 SDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAM 236
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 267 bits (680), Expect = 3e-069
Identities = 143/249 (57%), Positives = 173/249 (69%), Gaps = 17/249 (6%)
Frame = +2
Query: 149 DSSSAAAATPAGTTPPPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQ- 325
DS + PPPP QQQQW Q AAM M Q + PP H P Q
Sbjct: 7 DSQTQQEQNQRQQPPPPP---QQQQWMPIQYPAAAMVM-----QHHIIPPQHYGPPPPQH 58
Query: 326 --AAAYPQFQ---YAPPYHQQQQQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQ 490
AAAY Q+Q + P+ QQ QK+ + KT+WIGDL HWMDE YLH+CF T +
Sbjct: 59 YLAAAYHQYQPHHHHLPHVQQHTQKQQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGE 118
Query: 491 VSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEK 670
++S+KVIRNKQT SEGYGFVEFL+ + AE+VLQ+Y G+ MPN EQPFRLNWA+FSTG+K
Sbjct: 119 IASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQNYGGILMPNTEQPFRLNWATFSTGDK 178
Query: 671 RASENNGPDLSLFVGDLAPDVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFG 847
R+ +N PDLS+FVGDLA DVTD+LL ETF + Y SVK AKVV D+NTGRSKGYGFVRFG
Sbjct: 179 RS--DNAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFG 236
Query: 848 DESERSKAL 874
D+SER++A+
Sbjct: 237 DDSERTQAM 245
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 265 bits (675), Expect = 1e-068
Identities = 143/230 (62%), Positives = 165/230 (71%), Gaps = 13/230 (5%)
Frame = +2
Query: 206 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPYHQQQQQK 385
QQQQQQ QQ QQWM AM QQQ M YP ++ HQQQQQK
Sbjct: 13 QQQQQQQQQQQQWM-AMQQYQQQWMAMQYPAAAMAMRNDRCMV---SNTCLQQHQQQQQK 68
Query: 386 ------RGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYG 547
+ SS +D KT+WIGDL WMDE+YLH+CFS +V SVK+IRNKQT QSE YG
Sbjct: 69 MQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYG 128
Query: 548 FVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAP 727
FVEF + +AAE+VLQSY+G MPNAEQPFRLNWA FSTGEKRA G D S+FVGDLA
Sbjct: 129 FVEFNTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRA--ETGSDFSIFVGDLAS 186
Query: 728 DVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
DVTDT+L +TFA+ Y S+KGAKVV+D+NTG SKGYGFVRFGDESERS+A+
Sbjct: 187 DVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAM 236
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 262 bits (669), Expect = 5e-068
Identities = 139/242 (57%), Positives = 168/242 (69%), Gaps = 13/242 (5%)
Frame = +2
Query: 179 AGTTPP---PPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQ 349
AG PP P QQQQQW Q QQ M AMAM QQQQ QA Q
Sbjct: 6 AGVGPPFANPNQNQQQQQWLQQQQQM-AMAMQQQQQPPQQQANQAMAMQQQQAPMMAQQY 64
Query: 350 YA--PPYHQQQ----QQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVI 511
YA P Y QQQ Q+ S D+VKTLW+GDL WMDE YLHTCFSHT ++ S K+I
Sbjct: 65 YAQQPQYQQQQLPMVMQQHQPQSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKII 124
Query: 512 RNKQTSQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNG 691
RNK T QSEGYGF+EF++R+AAE+++Q+Y+G MPN EQ FR+NWA+FS GE+R + G
Sbjct: 125 RNKYTGQSEGYGFMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRL--DGG 182
Query: 692 PDLSLFVGDLAPDVTDTLLMETF-AAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSK 868
PD S+FVGDL DV+D +L ETF + Y SVK AKVV+D+NTGRSKGYGFVRFG+ESER++
Sbjct: 183 PDFSIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERAR 242
Query: 869 AL 874
A+
Sbjct: 243 AM 244
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 262 bits (669), Expect = 5e-068
Identities = 139/242 (57%), Positives = 168/242 (69%), Gaps = 13/242 (5%)
Frame = +2
Query: 179 AGTTPP---PPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQ 349
AG PP P QQQQQW Q QQ M AMAM QQQQ QA Q
Sbjct: 6 AGVGPPFANPNQNQQQQQWLQQQQQM-AMAMQQQQQPPQQQANQAMAMQQQQAPMMAQQY 64
Query: 350 YA--PPYHQQQ----QQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVI 511
YA P Y QQQ Q+ S D+VKTLW+GDL WMDE YLHTCFSHT ++ S K+I
Sbjct: 65 YAQQPQYQQQQLPMVMQQHQPQSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKII 124
Query: 512 RNKQTSQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNG 691
RNK T QSEGYGF+EF++R+AAE+++Q+Y+G MPN EQ FR+NWA+FS GE+R + G
Sbjct: 125 RNKYTGQSEGYGFMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRL--DGG 182
Query: 692 PDLSLFVGDLAPDVTDTLLMETF-AAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSK 868
PD S+FVGDL DV+D +L ETF + Y SVK AKVV+D+NTGRSKGYGFVRFG+ESER++
Sbjct: 183 PDFSIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERAR 242
Query: 869 AL 874
A+
Sbjct: 243 AM 244
>gi|225444438|ref|XP_002266857.1| PREDICTED: hypothetical protein, partial
[Vitis vinifera]
Length = 265
Score = 248 bits (631), Expect = 1e-063
Identities = 133/233 (57%), Positives = 159/233 (68%), Gaps = 17/233 (7%)
Frame = +2
Query: 191 PPPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPYHQ 370
PPP QQQQ W QQ M Q PP HQ AP Q +P Q P H
Sbjct: 14 PPPTMDQQQQPWMMMQQPPPQMWAQQP-------PPPHQVAPPPQ---HPPQQPQPHPHP 63
Query: 371 QQQ----QKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSE 538
QQQ Q +S D+V+TLWIGDL +WMDE Y++ CF+HT +V+SVK+IRNKQT+Q E
Sbjct: 64 QQQMPQYQPAQPASADEVRTLWIGDLQYWMDENYINGCFAHTGEVTSVKLIRNKQTNQLE 123
Query: 539 GYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGD 718
GYGF+EF+SR+AAE +LQ+Y+G MPN EQ FRLNWASF GEKR +N PD ++FVGD
Sbjct: 124 GYGFIEFISRAAAERILQTYNGSLMPNVEQNFRLNWASFGVGEKR--PDNTPDFTIFVGD 181
Query: 719 LAPDVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
LA DVTD +L ETF Y SVKGAKVV D T R+KGYGFVRFGDESE+ +A+
Sbjct: 182 LASDVTDYMLQETFRVHYPSVKGAKVVTDRLTSRTKGYGFVRFGDESEQLRAM 234
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x
acerifolia]
Length = 216
Score = 242 bits (617), Expect = 6e-062
Identities = 121/183 (66%), Positives = 146/183 (79%), Gaps = 7/183 (3%)
Frame = +2
Query: 341 QFQYAPPYHQQQ----QQKRGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKV 508
Q Y P +HQQQ QQ++ ++ KT+W+GDL +WMD YL+ CF+HT +V S+KV
Sbjct: 1 QQHYMPYHHQQQHTQHQQQQQQGLTEENKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKV 60
Query: 509 IRNKQTSQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENN 688
IRNKQT QSEGYGFVEF SR AAE+VLQ+Y+G MPN EQPFRLNWASFS GE+R+
Sbjct: 61 IRNKQTGQSEGYGFVEFFSREAAEKVLQNYNGTAMPNTEQPFRLNWASFSMGERRSEA-- 118
Query: 689 GPDLSLFVGDLAPDVTDTLLMETFAA-YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERS 865
G D S+FVGDL+ DVTDTLL ETFA+ Y SVKGAKVVID+NTGRSKGYGFVRFGD++ERS
Sbjct: 119 GSDHSIFVGDLSSDVTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERS 178
Query: 866 KAL 874
+A+
Sbjct: 179 RAI 181
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,396,843,342,477
Number of Sequences: 15229318
Number of Extensions: 1396843342477
Number of Successful Extensions: 400319785
Number of sequences better than 0.0: 0
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