BLASTX 7.6.2
Query= UN83976 /QuerySize=875
(874 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 80 2e-014
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 78 8e-014
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 76 2e-013
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 76 2e-013
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 70 1e-011
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 66 2e-010
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 66 2e-010
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 66 2e-010
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 63 3e-009
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 57 1e-007
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 57 1e-007
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 57 2e-007
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 57 2e-007
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 57 2e-007
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ... 57 2e-007
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis G... 56 3e-007
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 54 1e-006
sp|P40561|SGN1_YEAST RNA-binding protein SGN1 OS=Saccharomyces c... 54 2e-006
sp|P41891|GAR2_SCHPO Protein gar2 OS=Schizosaccharomyces pombe G... 52 6e-006
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 80 bits (196), Expect = 2e-014
Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Frame = +2
Query: 413 KTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQ 592
+TL++G+L + E + FS S K+I + + ++ Y FVEF A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMI--TEHTSNDPYCFVEFYEHRDAAAALA 66
Query: 593 SYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAAYQ 772
+ +G + E ++NWA+ + +K+ + N+ +FVGDL+P++T + FA +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKDTSNH---FHVFVGDLSPEITTEDIKSAFAPFG 121
Query: 773 SVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
+ A+VV D TG+SKGYGFV F ++ + A+
Sbjct: 122 KISDARVVKDMATGKSKGYGFVSFYNKLDAENAI 155
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 78 bits (190), Expect = 8e-014
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Frame = +2
Query: 386 RGGSSGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLS 565
+G S + L++G+L + +D L F V +VI N++T +S G+GFV +
Sbjct: 46 QGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMST 105
Query: 566 RSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENN-GPDLSLFVGDLAPDVTDT 742
AE+ ++ +G M + +N A+ +RA + P ++VG+L DV +
Sbjct: 106 VEEAEKAVELLNGYDMDGRQ--LTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTS 163
Query: 743 LLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
L + F+ + V A+VV D TGRS+G+GFV ESE + A+
Sbjct: 164 RLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 207
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 76 bits (186), Expect = 2e-013
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Frame = +2
Query: 413 KTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQ 592
KTL++G+L + E + FS + K+I + T+ ++ Y FVEF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 593 SYSGVTMPNAEQPFRLNWASFSTGEKR--------ASENNGPDLSLFVGDLAPDVTDTLL 748
+ +G + E ++NWA+ + +K+ +++ + +FVGDL+P++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 749 METFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
FA + + A+VV D TG+SKGYGFV F ++ + A+
Sbjct: 123 KAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 164
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 76 bits (186), Expect = 2e-013
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Frame = +2
Query: 413 KTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEVLQ 592
KTL++G+L + E + FS + K+I + T+ ++ Y FVEF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 593 SYSGVTMPNAEQPFRLNWASFSTGEKR--------ASENNGPDLSLFVGDLAPDVTDTLL 748
+ +G + E ++NWA+ + +K+ +++ + +FVGDL+P++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 749 METFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
FA + + A+VV D TG+SKGYGFV F ++ + A+
Sbjct: 123 KAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 164
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 70 bits (171), Expect = 1e-011
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Frame = +2
Query: 521 QTSQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDL 700
Q + ++ Y FVEF A L + +G + E ++NWA+ + +K+ + N+
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNH---F 114
Query: 701 SLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
+FVGDL+P++T + FA + + A+VV D TG+SKGYGFV F ++ + A+
Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAI 172
>sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1
SV=2
Length = 530
Score = 66 bits (160), Expect = 2e-010
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Frame = +2
Query: 407 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEV 586
D +T++ L + L FS +V V++I ++ + +S+G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 587 L----QSYSGV-TMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLM 751
+ Q GV + A Q + A+ + ++ S GP + L+VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA--GP-MRLYVGSLHFNITEDMLR 267
Query: 752 ETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
F + ++ ++++DS TGRSKGYGF+ F D KAL
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1
SV=1
Length = 530
Score = 66 bits (160), Expect = 2e-010
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Frame = +2
Query: 407 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEV 586
D +T++ L + L FS +V V++I ++ + +S G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLA 210
Query: 587 L----QSYSGV-TMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLM 751
+ Q GV + A Q + A+ + ++ S GP + L+VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA--GP-MRLYVGSLHFNITEDMLR 267
Query: 752 ETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
F + ++ ++++DS TGRSKGYGF+ F D KAL
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2
SV=1
Length = 524
Score = 66 bits (160), Expect = 2e-010
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Frame = +2
Query: 407 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEV 586
D +T++ L + L FS +V V++I ++ + +S+G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 587 L----QSYSGV-TMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLM 751
+ Q GV + A Q + A+ + ++ S GP + L+VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA--GP-MRLYVGSLHFNITEDMLR 267
Query: 752 ETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
F + ++ ++++DS TGRSKGYGF+ F D KAL
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23
PE=1 SV=1
Length = 439
Score = 63 bits (151), Expect = 3e-009
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Frame = +2
Query: 407 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLSRSAAEEV 586
D +T++ L + L FS +V V++I ++ + +S+G +VEF +
Sbjct: 164 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 223
Query: 587 L----QSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLME 754
+ Q GV P Q + + + NG + L+VG L ++T+ +L
Sbjct: 224 IGLTGQRLLGV--PIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRG 281
Query: 755 TFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
F + + ++ DS+TGRSKGYGF+ F D +AL
Sbjct: 282 IFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 57 bits (136), Expect = 1e-007
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = +2
Query: 695 DLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
D +F GDL +V D +L F+ Y S AKVV D TG++KGYGFV F D ++ +A+
Sbjct: 302 DFRIFCGDLGNEVNDDILARAFSRYPSFLKAKVVRDKRTGKTKGYGFVSFKDPNDYVRAM 361
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 57 bits (136), Expect = 1e-007
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +2
Query: 647 ASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKG 826
A S ++ E D +F GDL +V D +L F+ Y S AKV+ D TG++KG
Sbjct: 276 AGTSWEDQSLLEWESDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKG 335
Query: 827 YGFVRFGDESERSKAL 874
YGFV F D ++ +A+
Sbjct: 336 YGFVSFKDPNDYVRAM 351
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 57 bits (135), Expect = 2e-007
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 680 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESE 859
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 343 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 402
Query: 860 RSKAL 874
+A+
Sbjct: 403 YVRAM 407
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 57 bits (135), Expect = 2e-007
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 680 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESE 859
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 375 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 434
Query: 860 RSKAL 874
+A+
Sbjct: 435 YVRAM 439
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 57 bits (135), Expect = 2e-007
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 680 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESE 859
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 369 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 428
Query: 860 RSKAL 874
+A+
Sbjct: 429 YVRAM 433
>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 57 bits (135), Expect = 2e-007
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 680 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESE 859
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 369 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 428
Query: 860 RSKAL 874
+A+
Sbjct: 429 YVRAM 433
>sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2
SV=1
Length = 392
Score = 56 bits (133), Expect = 3e-007
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +2
Query: 695 DLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKA 871
D +F GDL +V D +L F+ Y S AKV+ D TG++KGYGFV F D ++ +A
Sbjct: 292 DFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRA 350
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 54 bits (128), Expect = 1e-006
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 704 LFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSKAL 874
LF+G L+ D L + FA + V AKV++D TGRS+G+GFV F DE + A+
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
>sp|P40561|SGN1_YEAST RNA-binding protein SGN1 OS=Saccharomyces cerevisiae
GN=SGN1 PE=1 SV=1
Length = 250
Score = 54 bits (127), Expect = 2e-006
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +2
Query: 656 STGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGF 835
S EK A + S+FVG++ PDVT + + F +K ++ D NTG KGYG+
Sbjct: 50 SKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGY 109
Query: 836 VRFGDESERSKAL 874
+ F + R KAL
Sbjct: 110 IEFESPAYREKAL 122
>sp|P41891|GAR2_SCHPO Protein gar2 OS=Schizosaccharomyces pombe GN=gar2 PE=1
SV=2
Length = 500
Score = 52 bits (122), Expect = 6e-006
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 671 RASENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVVIDSNTGRSKGYGFVRFGD 850
+ S+++ ++FVG L+ +V D L + F Y ++ GA+V++D +GRSKGYG+V F +
Sbjct: 254 KPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDF-E 312
Query: 851 ESERSKA 871
E +KA
Sbjct: 313 TPEAAKA 319
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,925,890,923
Number of Sequences: 518415
Number of Extensions: 264925890923
Number of Successful Extensions: 1710380856
Number of sequences better than 0.0: 0
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