BLASTX 7.6.2
Query= UN83989 /QuerySize=408
(407 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8W206|CSN6A_ARATH COP9 signalosome complex subunit 6a OS=Ara... 217 2e-056
sp|Q8W1P0|CSN6B_ARATH COP9 signalosome complex subunit 6b OS=Ara... 202 4e-052
sp|P68356|CSN6A_BRAOL COP9 signalosome complex subunit 6a (Fragm... 69 4e-012
sp|Q9VCY3|CSN6_DROME COP9 signalosome complex subunit 6 OS=Droso... 62 5e-010
sp|Q54C92|CSN6_DICDI COP9 signalosome complex subunit 6 OS=Dicty... 62 7e-010
sp|Q6NUC2|CSN6_XENLA COP9 signalosome complex subunit 6 OS=Xenop... 61 1e-009
sp|Q07G98|CSN6_XENTR COP9 signalosome complex subunit 6 OS=Xenop... 61 1e-009
sp|Q7L5N1|CSN6_HUMAN COP9 signalosome complex subunit 6 OS=Homo ... 58 9e-009
sp|O88545|CSN6_MOUSE COP9 signalosome complex subunit 6 OS=Mus m... 58 9e-009
sp|A7TX81|CSN6_PIG COP9 signalosome complex subunit 6 OS=Sus scr... 58 9e-009
sp|O00303|EIF3F_HUMAN Eukaryotic translation initiation factor 3... 50 2e-006
sp|Q4R5B8|EIF3F_MACFA Eukaryotic translation initiation factor 3... 50 2e-006
sp|Q9DCH4|EIF3F_MOUSE Eukaryotic translation initiation factor 3... 50 2e-006
sp|A5A6I3|EIF3F_PANTR Eukaryotic translation initiation factor 3... 50 2e-006
>sp|Q8W206|CSN6A_ARATH COP9 signalosome complex subunit 6a OS=Arabidopsis
thaliana GN=CSN6A PE=1 SV=2
Length = 317
Score = 217 bits (551), Expect = 2e-056
Identities = 111/128 (86%), Positives = 116/128 (90%), Gaps = 9/128 (7%)
Frame = +1
Query: 1 MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPPGSVCSTENKASSNNNNNGEAM--- 171
MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLN PP S+C AS + +NNGEAM
Sbjct: 1 MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLN-PPASIC-----ASGHGSNNGEAMFQQ 54
Query: 172 NPRVYGCVIGVQRGRTVEIFNSFELLFDPSTETLDRSFLEKKQELYKKVFPDFYILGWYS 351
NPRVYGCVIGVQRGRTVEIFNSFELL+DPST+TLDRSFLEKKQELYKKVFPDFYILGWYS
Sbjct: 55 NPRVYGCVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYS 114
Query: 352 TGSDAEES 375
TGSDAEES
Sbjct: 115 TGSDAEES 122
>sp|Q8W1P0|CSN6B_ARATH COP9 signalosome complex subunit 6b OS=Arabidopsis
thaliana GN=CSN6B PE=1 SV=2
Length = 317
Score = 202 bits (513), Expect = 4e-052
Identities = 100/128 (78%), Positives = 111/128 (86%), Gaps = 9/128 (7%)
Frame = +1
Query: 1 MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPPGSVCSTENKASSNNNNNGEAM--- 171
MAPSSSSGLTFKLHPLV++NISDH+TRVKTQLNPP S A+ N +NN +AM
Sbjct: 1 MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAASC------ATGNGSNNADAMLLQ 54
Query: 172 NPRVYGCVIGVQRGRTVEIFNSFELLFDPSTETLDRSFLEKKQELYKKVFPDFYILGWYS 351
NPRVYGCVIG+QRGRTVEIFNSFEL+FDP+ +TLDRSFLEKKQELYKKVFPDFY+LGWYS
Sbjct: 55 NPRVYGCVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWYS 114
Query: 352 TGSDAEES 375
TGSDA ES
Sbjct: 115 TGSDATES 122
>sp|P68356|CSN6A_BRAOL COP9 signalosome complex subunit 6a (Fragments)
OS=Brassica oleracea GN=CSN6A PE=1 SV=1
Length = 66
Score = 69 bits (168), Expect = 4e-012
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +1
Query: 208 RGRTVEIFNSFELLFDPSTETLDRSFLEKKQELYKKV 318
+GRTVEIFNSFELL DP+T+TLDRSFLEKKQELYKK+
Sbjct: 1 KGRTVEIFNSFELLLDPTTQTLDRSFLEKKQELYKKM 37
>sp|Q9VCY3|CSN6_DROME COP9 signalosome complex subunit 6 OS=Drosophila
melanogaster GN=CSN6 PE=1 SV=1
Length = 341
Score = 62 bits (150), Expect = 5e-010
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Frame = +1
Query: 178 RVYGCVIGVQRGRTVEIFNSFELLFD--PSTETLDRSFLEKKQELYKKVFPDFYILGWYS 351
+VYG +IG Q+GR +EI NSFEL D +++ + KK++ YK+VF D +GWY+
Sbjct: 80 QVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWYT 139
Query: 352 TGSD 363
TG +
Sbjct: 140 TGDN 143
>sp|Q54C92|CSN6_DICDI COP9 signalosome complex subunit 6 OS=Dictyostelium
discoideum GN=csn6 PE=1 SV=1
Length = 309
Score = 62 bits (149), Expect = 7e-010
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Frame = +1
Query: 124 TENKASSNNNNNGEAMNPRVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKK 297
T K SN + N RV G ++GVQ GR VEI NSFE+++ + LD +L KK
Sbjct: 43 TRTKVQSNYQD-----NCRVIGVILGVQNGRNVEICNSFEMVYATVDKQLVLDIEYLRKK 97
Query: 298 QELYKKVFPDFYILGWYSTGSDAEE 372
Y+++FP + +LGWYSTGS +
Sbjct: 98 ---YEQLFPLYDLLGWYSTGSQVSK 119
>sp|Q6NUC2|CSN6_XENLA COP9 signalosome complex subunit 6 OS=Xenopus laevis
GN=cops6 PE=2 SV=1
Length = 318
Score = 61 bits (146), Expect = 1e-009
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 178 RVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYKKVFPDFYILGWYS 351
+V G +IG Q GR +E+ NSFELL + E T+++ + K+E +K+VF D LGWY+
Sbjct: 58 QVIGALIGKQEGRNIEVMNSFELLSQINDEKITINKEYYYTKEEQFKQVFKDMEFLGWYT 117
Query: 352 TGSDAEES 375
TG + S
Sbjct: 118 TGGTPDPS 125
>sp|Q07G98|CSN6_XENTR COP9 signalosome complex subunit 6 OS=Xenopus tropicalis
GN=cops6 PE=2 SV=1
Length = 319
Score = 61 bits (146), Expect = 1e-009
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 178 RVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYKKVFPDFYILGWYS 351
+V G +IG Q GR +E+ NSFELL + E T+++ + K+E +K+VF D LGWY+
Sbjct: 59 QVIGALIGKQEGRNIEVMNSFELLSQINEEKITINKEYYYTKEEQFKQVFKDMEFLGWYT 118
Query: 352 TGSDAEES 375
TG + S
Sbjct: 119 TGGTPDPS 126
>sp|Q7L5N1|CSN6_HUMAN COP9 signalosome complex subunit 6 OS=Homo sapiens
GN=COPS6 PE=1 SV=1
Length = 327
Score = 58 bits (139), Expect = 9e-009
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 178 RVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYKKVFPDFYILGWYS 351
+V G +IG Q GR +E+ NSFELL E +D+ + K+E +K+VF + LGWY+
Sbjct: 67 QVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYT 126
Query: 352 TGSDAEES 375
TG + S
Sbjct: 127 TGGPPDPS 134
>sp|O88545|CSN6_MOUSE COP9 signalosome complex subunit 6 OS=Mus musculus
GN=Cops6 PE=1 SV=1
Length = 324
Score = 58 bits (139), Expect = 9e-009
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 178 RVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYKKVFPDFYILGWYS 351
+V G +IG Q GR +E+ NSFELL E +D+ + K+E +K+VF + LGWY+
Sbjct: 64 QVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYT 123
Query: 352 TGSDAEES 375
TG + S
Sbjct: 124 TGGPPDPS 131
>sp|A7TX81|CSN6_PIG COP9 signalosome complex subunit 6 OS=Sus scrofa GN=COPS6
PE=2 SV=1
Length = 323
Score = 58 bits (139), Expect = 9e-009
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 178 RVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYKKVFPDFYILGWYS 351
+V G +IG Q GR +E+ NSFELL E +D+ + K+E +K+VF + LGWY+
Sbjct: 63 QVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYT 122
Query: 352 TGSDAEES 375
TG + S
Sbjct: 123 TGGPPDPS 130
>sp|O00303|EIF3F_HUMAN Eukaryotic translation initiation factor 3 subunit F
OS=Homo sapiens GN=EIF3F PE=1 SV=1
Length = 357
Score = 50 bits (119), Expect = 2e-006
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 139 SSNNNNNGEAMNPRVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYK 312
S N G A RV G ++G +VE+ N F + + S + +D F + EL+K
Sbjct: 105 SYERRNEGAA---RVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 161
Query: 313 KVFPDFYILGWYSTGSDAEE 372
KV P+ ILGWY+TG D E
Sbjct: 162 KVSPNELILGWYATGHDITE 181
>sp|Q4R5B8|EIF3F_MACFA Eukaryotic translation initiation factor 3 subunit F
OS=Macaca fascicularis GN=EIF3F PE=2 SV=1
Length = 361
Score = 50 bits (119), Expect = 2e-006
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 139 SSNNNNNGEAMNPRVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYK 312
S N G A RV G ++G +VE+ N F + + S + +D F + EL+K
Sbjct: 109 SYERRNEGAA---RVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 165
Query: 313 KVFPDFYILGWYSTGSDAEE 372
KV P+ ILGWY+TG D E
Sbjct: 166 KVSPNELILGWYATGHDITE 185
>sp|Q9DCH4|EIF3F_MOUSE Eukaryotic translation initiation factor 3 subunit F
OS=Mus musculus GN=Eif3f PE=1 SV=1
Length = 361
Score = 50 bits (119), Expect = 2e-006
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 139 SSNNNNNGEAMNPRVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYK 312
S N G A RV G ++G +VE+ N F + + S + +D F + EL+K
Sbjct: 109 SYERRNEGAA---RVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 165
Query: 313 KVFPDFYILGWYSTGSDAEE 372
KV P+ ILGWY+TG D E
Sbjct: 166 KVSPNELILGWYATGHDITE 185
>sp|A5A6I3|EIF3F_PANTR Eukaryotic translation initiation factor 3 subunit F
OS=Pan troglodytes GN=EIF3F PE=2 SV=1
Length = 361
Score = 50 bits (119), Expect = 2e-006
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 139 SSNNNNNGEAMNPRVYGCVIGVQRGRTVEIFNSFELLFDPSTE--TLDRSFLEKKQELYK 312
S N G A RV G ++G +VE+ N F + + S + +D F + EL+K
Sbjct: 109 SYERRNEGAA---RVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 165
Query: 313 KVFPDFYILGWYSTGSDAEE 372
KV P+ ILGWY+TG D E
Sbjct: 166 KVSPNELILGWYATGHDITE 185
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,925,890,923
Number of Sequences: 518415
Number of Extensions: 264925890923
Number of Successful Extensions: 1710380856
Number of sequences better than 0.0: 0
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