BLASTX 7.6.2
Query= UN84194 /QuerySize=757
(756 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12180.1 | Symbols: | cornichon family protei... 119 2e-027
TAIR9_protein||AT1G12390.1 | Symbols: | cornichon family protei... 76 2e-014
TAIR9_protein||AT1G12340.1 | Symbols: | FUNCTIONS IN: molecular... 74 7e-014
TAIR9_protein||AT4G12090.1 | Symbols: | cornichon family protei... 69 3e-012
TAIR9_protein||AT1G62880.1 | Symbols: | cornichon family protei... 67 8e-012
>TAIR9_protein||AT3G12180.1 | Symbols: | cornichon family protein |
chr3:3883464-3884570 FORWARD
Length = 147
Score = 119 bits (298), Expect = 2e-027
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +1
Query: 445 VICLTDLEADYLNPFETSSRINRLILPEFILQASLCILFLITWHWVFFLVALPVTCYHAM 624
VICLTDLEADYLNPFETS+RINRL++PEFILQ SLC+LFL+TWHWVFFLVA+PVT YHAM
Sbjct: 26 VICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAM 85
Query: 625 L 627
L
Sbjct: 86 L 86
Score = 53 bits (126), Expect = 2e-007
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 43 MGWDLFLWILSFFVSLALVASVFYQV 120
M WDLFLWI+SFFVSLALVASVFYQV
Sbjct: 1 MAWDLFLWIVSFFVSLALVASVFYQV 26
>TAIR9_protein||AT1G12390.1 | Symbols: | cornichon family protein |
chr1:4220347-4221481 FORWARD
Length = 138
Score = 76 bits (185), Expect = 2e-014
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Frame = +1
Query: 418 YFFLCVCV*VI-----CLTDLEADYLNPFETSSRINRLILPEFILQASLCILFLITWHWV 582
+FFL V +I CL DLE DY+NP++++SRIN ++LPEFI+Q LC+ +L+T HW
Sbjct: 11 FFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWF 70
Query: 583 FFLVALPVTCYH 618
L+ LP Y+
Sbjct: 71 MTLLCLPYLYYN 82
>TAIR9_protein||AT1G12340.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: intracellular signaling cascade; LOCATED IN:
membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage; CONTAINS
InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis
thaliana protein match is: cornichon family protein (TAIR:AT1G12390.1);
Has 463 Blast hits to 463 proteins in 125 species: Archae - 0; Bacteria
- 0; Metazoa - 278; Fungi - 110; Plants - 41; Viruses - 0; Other
Eukaryotes - 34 (source: NCBI BLink). | chr1:4197396-4198032 FORWARD
Length = 130
Score = 74 bits (181), Expect = 7e-014
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1
Query: 445 VICLTDLEADYLNPFETSSRINRLILPEFILQASLCILFLITWHWVFFLVALPVTCYH 618
++CL DLE DY+NP++++SRIN ++LPEFI+Q LC+ +L+T HW L+ LP Y+
Sbjct: 17 LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYN 74
>TAIR9_protein||AT4G12090.1 | Symbols: | cornichon family protein |
chr4:7242165-7242924 REVERSE
Length = 136
Score = 69 bits (167), Expect = 3e-012
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Frame = +1
Query: 418 YFFLCVCV*VI-----CLTDLEADYLNPFETSSRINRLILPEFILQASLCILFLITWHWV 582
+ FL + ++ CL DLE D +NP++ SSRINR++LPEF LQ LC+ +++T HW
Sbjct: 11 FLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWF 70
Query: 583 FFLVALPVTCYHAML 627
+++LP Y+ L
Sbjct: 71 MAVLSLPHLFYNIRL 85
>TAIR9_protein||AT1G62880.1 | Symbols: | cornichon family protein |
chr1:23292125-23293307 FORWARD
Length = 138
Score = 67 bits (163), Expect = 8e-012
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +1
Query: 445 VICLTDLEADYLNPFETSSRINRLILPEFILQASLCILFLITWHWVFFLVALPVTCYH 618
+I L DLE DY+NP++++SRIN ++LPE ILQ LC+ +L+T HW L+ +P Y+
Sbjct: 25 LISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYN 82
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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