BLASTX 7.6.2
Query= UN84267 /QuerySize=655
(654 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=S... 193 8e-049
sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp... 75 3e-013
sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A OS=Synec... 73 2e-012
sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus el... 51 6e-006
>sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=Spinacia
oleracea GN=RPS1 PE=1 SV=1
Length = 411
Score = 193 bits (490), Expect = 8e-049
Identities = 98/144 (68%), Positives = 124/144 (86%), Gaps = 4/144 (2%)
Frame = +2
Query: 125 SPQNNKKSSSFSPLPTIVAAVAMSSGQTRERLELKKMFEDAYERCRTSPMEGVAFTVDDF 304
SP++ K FSP IV+AVA+S+ QTRER +LK++FEDAYERCR +PMEGV+FT+DDF
Sbjct: 27 SPKHTLK-PRFSP---IVSAVAVSNAQTRERQKLKQLFEDAYERCRNAPMEGVSFTIDDF 82
Query: 305 AAAIEQYDFNSEIGTRVKGTVFKTEANGALVDISAKSSAYLLVEHACIHRIKHVEEAGIV 484
A+++YDFNSE+G+RVKGTVF T+ANGALVDI+AKSSAYL + ACI+RIK+VEEAGI+
Sbjct: 83 HTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGII 142
Query: 485 PGMVEEFVIIGENESDDSLAVELK 556
PG+ EEFVIIGENE+DDSL + L+
Sbjct: 143 PGVREEFVIIGENEADDSLILSLR 166
Score = 69 bits (168), Expect = 2e-011
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +3
Query: 543 LLSLRTIQYELAWERCRQLQSEDVIVKAKVIGANKGG 653
+LSLR IQYELAWERCRQLQ+EDV+VK K++GANKGG
Sbjct: 162 ILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGG 198
>sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4
Length = 307
Score = 75 bits (183), Expect = 3e-013
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +2
Query: 269 PMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTEANGALVDISAKSSAYLLVEHACI 448
P + FT +DFAA ++QYD++ G V GTVF E GAL+DI AK++A+L V+ I
Sbjct: 7 PAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQEMSI 66
Query: 449 HRIKHVEEAGIVPGMVEEFVIIGENESDDSLAVELK 556
+R++ EE + P + EF I+ + D L + ++
Sbjct: 67 NRVESPEEV-LQPSEMREFFILSDENEDGQLTLSIR 101
>sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A OS=Synechocystis sp.
(strain PCC 6803) GN=rps1A PE=3 SV=1
Length = 328
Score = 73 bits (177), Expect = 2e-012
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 281 VAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTEANGALVDISAKSSAYLLVEHACIHRIK 460
+ FT++DFAA +++YD++ G V GTVF E+ GAL+DI AK++AY+ ++ I+R+
Sbjct: 10 IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69
Query: 461 HVEEAGIVPGMVEEFVIIGENESDDSLAVELK 556
EE + P EF I+ + D L + ++
Sbjct: 70 DPEEV-LQPNETREFFILTDENEDGQLTLSIR 100
>sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus elongatus (strain
PCC 7942) GN=rpsA PE=3 SV=1
Length = 295
Score = 51 bits (120), Expect = 6e-006
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +2
Query: 266 SPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTEANGALVDISAKSSAYLLVEHAC 445
SP + DDFA A+E +S+ G V+G V + +GA +DI K+ A+L A
Sbjct: 2 SPSAANTPSYDDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAA 61
Query: 446 IHRIKHVEEAGIVPGMVEEFVIIGENESDDSLAVELK 556
+H + + EA + EF++I + D + V L+
Sbjct: 62 LHAVLDL-EAHLPKDEELEFLVIRDQNEDGQVTVSLR 97
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 265,990,074,601
Number of Sequences: 518415
Number of Extensions: 265990074601
Number of Successful Extensions: 1725758359
Number of sequences better than 0.0: 0
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