BLASTX 7.6.2
Query= UN84267 /QuerySize=655
(654 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOS... 262 2e-070
>TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOSOMAL PROTEIN
S1); RNA binding / structural constituent of ribosome |
chr5:11619262-11621223 REVERSE
Length = 417
Score = 262 bits (667), Expect = 2e-070
Identities = 140/161 (86%), Positives = 147/161 (91%), Gaps = 4/161 (2%)
Frame = +2
Query: 77 SSSSSSSRLARTPSKNSPQNNKKSSSFSPLPTIVAAVAMSSGQTRERLELKKMFEDAYER 256
S SSSSRL+R SKN PQN KS+S S PTIVAAVAMSSGQT+ERLELKKMFEDAYER
Sbjct: 14 SPLSSSSRLSRRASKNFPQN--KSASVS--PTIVAAVAMSSGQTKERLELKKMFEDAYER 69
Query: 257 CRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTEANGALVDISAKSSAYLLVE 436
CRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKT+ANGALVDISAKSSAYL VE
Sbjct: 70 CRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDISAKSSAYLSVE 129
Query: 437 HACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLAVELKD 559
ACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSL + L++
Sbjct: 130 QACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRN 170
Score = 73 bits (178), Expect = 1e-013
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 543 LLSLRTIQYELAWERCRQLQSEDVIVKAKVIGANKGG 653
LLSLR IQYELAWERCRQLQ+EDVIVKAKVIGANKGG
Sbjct: 165 LLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGG 201
Score = 51 bits (120), Expect = 6e-007
Identities = 29/45 (64%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
Frame = +2
Query: 20 MASLAHQFTGLRCSPLSSSSSSSSSSRLARTPSKNSPQNNKKSSS 154
MASLA QF+GLRCSPL SSSSRL+R SKN PQN S S
Sbjct: 1 MASLAQQFSGLRCSPL------SSSSRLSRRASKNFPQNKSASVS 39
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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