BLASTX 7.6.2
Query= UN84286 /QuerySize=719
(718 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5LBA7|RLMF_BACFN Ribosomal RNA large subunit methyltransfera... 144 7e-034
sp|Q64RQ5|RLMF_BACFR Ribosomal RNA large subunit methyltransfera... 144 7e-034
sp|Q15VI3|RLMF_PSEA6 Ribosomal RNA large subunit methyltransfera... 130 1e-029
sp|A5FHX5|RLMF_FLAJ1 Ribosomal RNA large subunit methyltransfera... 117 9e-026
sp|Q86W50|MET10_HUMAN Putative methyltransferase METT10D OS=Homo... 104 8e-022
sp|Q6GR37|MET10_XENLA Putative methyltransferase METT10D OS=Xeno... 104 1e-021
sp|Q9CQG2|MET10_MOUSE Putative methyltransferase METT10D OS=Mus ... 102 2e-021
sp|Q5ZIA0|MET10_CHICK Putative methyltransferase METT10D OS=Gall... 102 4e-021
sp|Q6DC64|MET10_DANRE Putative methyltransferase METT10D OS=Dani... 81 7e-015
sp|Q7K3B9|MET10_DROME Putative methyltransferase METT10D homolog... 76 2e-013
sp|Q290Z2|MET10_DROPS Putative methyltransferase METT10D homolog... 75 3e-013
sp|A6W2M9|RLMF_MARMS Ribosomal RNA large subunit methyltransfera... 72 3e-012
sp|A3QJF9|RLMF_SHELP Ribosomal RNA large subunit methyltransfera... 69 2e-011
sp|B1KP42|RLMF_SHEWM Ribosomal RNA large subunit methyltransfera... 69 4e-011
sp|Q4ZXI1|RLMF_PSEU2 Ribosomal RNA large subunit methyltransfera... 67 8e-011
sp|Q08A02|RLMF_SHEFN Ribosomal RNA large subunit methyltransfera... 66 2e-010
sp|A6H0G2|RLMF_FLAPJ Ribosomal RNA large subunit methyltransfera... 66 2e-010
sp|Q87Q26|RLMF_VIBPA Ribosomal RNA large subunit methyltransfera... 66 2e-010
sp|Q48MF3|RLMF_PSE14 Ribosomal RNA large subunit methyltransfera... 65 3e-010
>sp|Q5LBA7|RLMF_BACFN Ribosomal RNA large subunit methyltransferase F
OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rlmF PE=3
SV=1
Length = 305
Score = 144 bits (362), Expect = 7e-034
Identities = 82/238 (34%), Positives = 131/238 (55%), Gaps = 23/238 (9%)
Frame = +2
Query: 26 LLLHDHSLTWW-IPDGQLCPTVPNRSNYIHWINDLL------SSSHILPTPSSSSIVKGF 184
LL+ + + +W IP LCP +P R++YIH+I DL+ S+ + ++ +
Sbjct: 58 LLISYYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISDESTGLKTAVPNTRQYRCL 117
Query: 185 DIGTGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSNPHVSDLIEIRDSREEEEE 364
DIG GANCIYP++G + +GW+FVGSD+ V+++ A K V NP ++ IE+R R + +
Sbjct: 118 DIGVGANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQR-DSRK 176
Query: 365 VLVGVVKDSETFDFCMCNPPFFETFEEA--GLNPKTSC-------------GGTRAEMVC 499
+ G++ +E FD +CNPPF + EEA G K S GG E+ C
Sbjct: 177 IFEGIIAPNEYFDVTLCNPPFHSSKEEAEDGTLRKLSSLKGKKVTKAQLNFGGNANELWC 236
Query: 500 DGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVKTTEFVQG 673
+GGE F+ +I++S ++ W+TS++ K+ NL L +KL + + E QG
Sbjct: 237 EGGEFRFLLTMIEESRNYRKNCGWFTSLVSKEKNLGKLTAKLKSTDIAEHRIIEMHQG 294
>sp|Q64RQ5|RLMF_BACFR Ribosomal RNA large subunit methyltransferase F
OS=Bacteroides fragilis GN=rlmF PE=3 SV=1
Length = 305
Score = 144 bits (362), Expect = 7e-034
Identities = 79/238 (33%), Positives = 130/238 (54%), Gaps = 23/238 (9%)
Frame = +2
Query: 26 LLLHDHSLTWW-IPDGQLCPTVPNRSNYIHWINDLL------SSSHILPTPSSSSIVKGF 184
LL+ + + +W IP LCP +P R++YIH+I DL+ S+ + ++ +
Sbjct: 58 LLISCYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISDESTGLKTAIPNARQYRCL 117
Query: 185 DIGTGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSNPHVSDLIEIRDSREEEEE 364
DIG GANCIYP++G + +GW+FVGSD+ V+++ A K V NP ++ IE+R R + +
Sbjct: 118 DIGVGANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQR-DSRK 176
Query: 365 VLVGVVKDSETFDFCMCNPPFFETFEEAG---------------LNPKTSCGGTRAEMVC 499
+ G++ +E FD +CNPPF + EEA + + GG E+ C
Sbjct: 177 IFEGIIAPNEYFDVTLCNPPFHSSKEEAEDGTLRKLSSLKGKKVTKARLNFGGNANELWC 236
Query: 500 DGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVKTTEFVQG 673
+GGE F+ +I++S ++ W+TS++ K+ NL L +KL + + E QG
Sbjct: 237 EGGELRFLLTMIEESRNYRKNCGWFTSLVSKEKNLGKLTAKLKSTDIAEHRIIEMHQG 294
>sp|Q15VI3|RLMF_PSEA6 Ribosomal RNA large subunit methyltransferase F
OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rlmF PE=3
SV=1
Length = 330
Score = 130 bits (326), Expect = 1e-029
Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Frame = +2
Query: 2 ATRELTRVLLLHDHSLTWW-IPDGQLCPTVPNRSNYIHWINDLLSSSHILPTPSSSSIVK 178
+ + L LL+H + L W IP+G LCP VP R++YIH + DLL+ + P+ + ++
Sbjct: 69 SVKALNAALLIHYYGLNMWDIPEGYLCPPVPGRADYIHGLADLLAKDNKGVVPTGNRVI- 127
Query: 179 GFDIGTGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSNPHVSDLIEIRDSREEE 358
G DIG GAN IYP++G+ +GW FVGSD+ DVAL+ A +NP + L+ +R + ++
Sbjct: 128 GLDIGVGANAIYPIIGSQTYGWDFVGSDIDDVALKSATTLANNNPKLKPLLAVR-KQHDK 186
Query: 359 EEVLVGVVKDSETFDFCMCNPPFFETFEEAGL 454
+ G+++ + F F +CNPPF ++ EEA +
Sbjct: 187 AYIFAGIIQPDDHFTFSLCNPPFHKSAEEAAM 218
>sp|A5FHX5|RLMF_FLAJ1 Ribosomal RNA large subunit methyltransferase F
OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
GN=rlmF PE=3 SV=1
Length = 316
Score = 117 bits (292), Expect = 9e-026
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Frame = +2
Query: 2 ATRELTRVLLLHDHSL-TWWIPDGQLCPTVPNRSNYIHWINDLLSSSHILPTPSSSSIVK 178
A + L + LL + + W IP LCP +P R++YIH++ DLL+ ++ P +S++
Sbjct: 55 AVKTLNKALLQTYYDIQNWDIPKNYLCPPIPGRADYIHYLADLLAETNNGKIPEGNSVM- 113
Query: 179 GFDIGTGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSNPHVSDLIEIRDSREEE 358
G DIGTGAN IYP+LG S++ WSFV +D+ ++E A K + +NP + D + ++ + E
Sbjct: 114 GLDIGTGANLIYPILGNSIYNWSFVATDIYKTSIENASKIIEANPRLIDAVSLQ-QQTEP 172
Query: 359 EEVLVGVVKDSETFDFCMCNPPFFETFEEAGLNPKTS 469
+ ++ + F F MCNPPF + EEA N TS
Sbjct: 173 RFIFKNIIIPEDRFTFTMCNPPFHASAEEA--NKSTS 207
Score = 69 bits (167), Expect = 3e-011
Identities = 34/90 (37%), Positives = 51/90 (56%)
Frame = +2
Query: 440 EEAGLNPKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLIS 619
E+ NP + GG AE+ C+GGE F+T++I +S + W+T+++ KK NL +
Sbjct: 217 EKKNTNPVLNFGGQNAELWCNGGEIGFITQMIYESVKYASQVLWFTTLVSKKENLSSIYK 276
Query: 620 KLWGVGVTVVKTTEFVQGQTSRWGLAWSFV 709
L V VKT E QGQ + +AWSF+
Sbjct: 277 TLKKVNAVSVKTIEMSQGQKNSRIVAWSFL 306
>sp|Q86W50|MET10_HUMAN Putative methyltransferase METT10D OS=Homo sapiens
GN=METT10D PE=1 SV=2
Length = 562
Score = 104 bits (258), Expect = 8e-022
Identities = 80/239 (33%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Frame = +2
Query: 2 ATRELTRVLLLHDHSLTWWIPDGQLCPTVPNRSNYIHWINDLLSSSHILPTPSSSSIVKG 181
A R LT LL D L+ IP +L PTVP R NYIHW+ DL+ + I G
Sbjct: 51 AVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIG 110
Query: 182 FDIGTGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSN----PHVSDLIEIRDSR 349
+ L F + V + A + E+N S+ V + D+
Sbjct: 111 TGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDAL 170
Query: 350 EEEEEVLVGVVKDSETFDFCMCNPPFFETFEEAGLNPKTSCGGTRAEMVCDGGEQAFVTR 529
+EE E++ + F + P + G E++ +GGE FV R
Sbjct: 171 KEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKR 230
Query: 530 IIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVKTTEFVQGQTSRWGLAWSF 706
II DS LK+R +WY+ MLGKK +L L +L GV V TEF QG+T RW LAWSF
Sbjct: 231 IIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSF 289
>sp|Q6GR37|MET10_XENLA Putative methyltransferase METT10D OS=Xenopus laevis
GN=mett10d PE=2 SV=1
Length = 547
Score = 104 bits (257), Expect = 1e-021
Identities = 80/235 (34%), Positives = 107/235 (45%), Gaps = 4/235 (1%)
Frame = +2
Query: 14 LTRVLLLHDHSLTWWIPDGQLCPTVPNRSNYIHWINDLLSSSHILPTPSSSSIVKGFDIG 193
LT LL D LT IP +L PTVP R NYIHW+ DL++ T I G
Sbjct: 55 LTCTLLKEDFGLTIDIPLERLIPTVPLRLNYIHWVEDLINYHDSDKTALRRGIDIGTGAS 114
Query: 194 TGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSN----PHVSDLIEIRDSREEEE 361
+ L F + V + A + E+N S+ V + D+ +EE
Sbjct: 115 CIYPLLGATLNGWYFLATEVDDICYNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEES 174
Query: 362 EVLVGVVKDSETFDFCMCNPPFFETFEEAGLNPKTSCGGTRAEMVCDGGEQAFVTRIIQD 541
E++ + F + P + G E++ +GGE FV RII D
Sbjct: 175 EIIYDFCMCNPPFFANQLEAQGVNSRNPHRSPPSSVNTGGITEIMAEGGELEFVKRIIHD 234
Query: 542 SAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVKTTEFVQGQTSRWGLAWSF 706
S LK+R +WY+ MLGKK +L L +L GV V TEF QG+T RW LAWSF
Sbjct: 235 SLKLKKRLRWYSCMLGKKCSLAPLKEELRLQGVPKVAHTEFYQGRTMRWALAWSF 289
>sp|Q9CQG2|MET10_MOUSE Putative methyltransferase METT10D OS=Mus musculus
GN=Mett10d PE=1 SV=1
Length = 553
Score = 102 bits (254), Expect = 2e-021
Identities = 79/235 (33%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
Frame = +2
Query: 14 LTRVLLLHDHSLTWWIPDGQLCPTVPNRSNYIHWINDLLSSSHILPTPSSSSIVKGFDIG 193
LT LL D L+ IP +L PTVP R NYIHW+ DL+ T I G
Sbjct: 55 LTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKTTLRRGIDIGTGAS 114
Query: 194 TGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSN----PHVSDLIEIRDSREEEE 361
+ L F + V + A + E+N S+ V + D+ +EE
Sbjct: 115 CIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEES 174
Query: 362 EVLVGVVKDSETFDFCMCNPPFFETFEEAGLNPKTSCGGTRAEMVCDGGEQAFVTRIIQD 541
E++ + F + P + G E++ +GGE FV RII D
Sbjct: 175 EIVYDFCMCNPPFFANQLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHD 234
Query: 542 SAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVKTTEFVQGQTSRWGLAWSF 706
S LK+R +WY+ MLGKK +L L +L GV V TEF QG+T RW LAWSF
Sbjct: 235 SLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTFTEFCQGRTMRWALAWSF 289
>sp|Q5ZIA0|MET10_CHICK Putative methyltransferase METT10D OS=Gallus gallus
GN=METT10D PE=2 SV=1
Length = 558
Score = 102 bits (252), Expect = 4e-021
Identities = 79/235 (33%), Positives = 105/235 (44%), Gaps = 4/235 (1%)
Frame = +2
Query: 14 LTRVLLLHDHSLTWWIPDGQLCPTVPNRSNYIHWINDLLSSSHILPTPSSSSIVKGFDIG 193
LT LL D LT IP +L PTVP R NYIHW+ DL+ I G
Sbjct: 55 LTCTLLKEDFGLTIDIPLERLIPTVPLRLNYIHWVEDLIGHQDADKRVLRRGIDIGTGAS 114
Query: 194 TGANCIYPLLGASLFGWSFVGSDVTDVALEWAEKNVRSN----PHVSDLIEIRDSREEEE 361
+ L F + V + A + E+N S+ V + D+ +EE
Sbjct: 115 CIYPLLGSTLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEES 174
Query: 362 EVLVGVVKDSETFDFCMCNPPFFETFEEAGLNPKTSCGGTRAEMVCDGGEQAFVTRIIQD 541
E++ + F + P + G E++ +GGE FV RII D
Sbjct: 175 EIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHD 234
Query: 542 SAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVKTTEFVQGQTSRWGLAWSF 706
S LK+R +WY+ MLGKK +L L +L GV V TEF QG+T RW LAWSF
Sbjct: 235 SLQLKKRLRWYSCMLGKKCSLAPLKEELKIQGVPKVTHTEFCQGRTMRWALAWSF 289
>sp|Q6DC64|MET10_DANRE Putative methyltransferase METT10D OS=Danio rerio
GN=mett10d PE=2 SV=1
Length = 471
Score = 81 bits (198), Expect = 7e-015
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2
Query: 458 PKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVG 637
P + G E++ +GGE FV R+I DS LK+R +WY+ MLGKK +L L +L G
Sbjct: 202 PSSINTGGVTEIMAEGGELEFVKRVIHDSLQLKKRLRWYSCMLGKKCSLAPLKDELRKQG 261
Query: 638 VTVVKTTEFVQGQTSRWGLAWSF 706
V V TEF QG+T RW LAWSF
Sbjct: 262 VAKVTHTEFCQGRTMRWALAWSF 284
>sp|Q7K3B9|MET10_DROME Putative methyltransferase METT10D homolog OS=Drosophila
melanogaster GN=CG7544 PE=2 SV=1
Length = 305
Score = 76 bits (186), Expect = 2e-013
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = +2
Query: 458 PKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVG 637
P + G++ E+ C GGE FV RII +S K+R + +T+MLG KAN+ ++ L +
Sbjct: 213 PNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRIFTTMLGVKANVPRILDYLKELQ 272
Query: 638 VTVVKTTEFVQGQTSRWGLAWSF 706
V V TTEF QG T+RW +AWSF
Sbjct: 273 VANVSTTEFHQGHTTRWAVAWSF 295
>sp|Q290Z2|MET10_DROPS Putative methyltransferase METT10D homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA20428 PE=3 SV=2
Length = 305
Score = 75 bits (184), Expect = 3e-013
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +2
Query: 476 GTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVKT 655
G+ E+ C+GGE FV RII++S + KQR +TSMLG KA++ ++ L +T V T
Sbjct: 217 GSAEELTCEGGEVHFVQRIIEESQLNKQRVLIFTSMLGVKASVPKILDYLKERQITNVTT 276
Query: 656 TEFVQGQTSRWGLAWSFVP 712
TEF QG T+RW +AWS P
Sbjct: 277 TEFHQGHTTRWAVAWSHQP 295
>sp|A6W2M9|RLMF_MARMS Ribosomal RNA large subunit methyltransferase F
OS=Marinomonas sp. (strain MWYL1) GN=rlmF PE=3 SV=1
Length = 327
Score = 72 bits (175), Expect = 3e-012
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 458 PKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVG 637
P + GGT AE+ CDGGE FV+R++++S R W+TS++ ++ NL + L VG
Sbjct: 229 PVLNFGGTAAELWCDGGEAGFVSRMVKESVQYADRCFWFTSLVARQGNLDAIYRTLKDVG 288
Query: 638 VTVVKTTEFVQGQTSRWGLAWSFV 709
VKT E QGQ +AWSF+
Sbjct: 289 ARQVKTIEMAQGQKISRFVAWSFL 312
>sp|A3QJF9|RLMF_SHELP Ribosomal RNA large subunit methyltransferase F
OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rlmF PE=3 SV=1
Length = 398
Score = 69 bits (168), Expect = 2e-011
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +2
Query: 440 EEAGLNPKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLIS 619
E A K + GG +AE+ C+GGEQAF+ ++I++S + W+TS++ KK NLK
Sbjct: 296 EVAKSKEKLNFGGQKAELWCEGGEQAFLGQMIRESQKFGSQCLWFTSLVSKKENLKPCYR 355
Query: 620 KLWGVGVTVVKTTEFVQGQTSRWGLAWSFVPP 715
L VG V+T E QG LAW+F+ P
Sbjct: 356 LLEQVGAKRVETLEMAQGNKLTRVLAWTFLTP 387
>sp|B1KP42|RLMF_SHEWM Ribosomal RNA large subunit methyltransferase F
OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rlmF PE=3 SV=1
Length = 382
Score = 69 bits (166), Expect = 4e-011
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = +2
Query: 473 GGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVGVTVVK 652
GG +AE+ C+GGE+ F+ +I +S V + W+TS++ KK NL+ ++L VG VK
Sbjct: 291 GGQKAELWCEGGEKQFLHNMICESKVFATQCLWFTSLVSKKENLEACYTELKRVGAITVK 350
Query: 653 TTEFVQGQTSRWGLAWSFVPPA 718
T + QG LAWSF+ P+
Sbjct: 351 TIDMAQGNKLTRVLAWSFLTPS 372
>sp|Q4ZXI1|RLMF_PSEU2 Ribosomal RNA large subunit methyltransferase F
OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rlmF PE=3 SV=1
Length = 328
Score = 67 bits (163), Expect = 8e-011
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +2
Query: 458 PKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVG 637
P + GG E+ CDGGE F+T++IQ+SA+L + W+++++ K +NL + S L G
Sbjct: 237 PVLNFGGQSQELWCDGGEIGFITQLIQESALLPSQVAWFSTLVSKASNLPPIHSALKKAG 296
Query: 638 VTVVKTTEFVQGQTSRWGLAWSFVPPA 718
VK E QGQ +AW+F+ A
Sbjct: 297 ALEVKVVEMGQGQKQSRFVAWTFLDKA 323
>sp|Q08A02|RLMF_SHEFN Ribosomal RNA large subunit methyltransferase F
OS=Shewanella frigidimarina (strain NCIMB 400) GN=rlmF PE=3 SV=1
Length = 360
Score = 66 bits (160), Expect = 2e-010
Identities = 34/87 (39%), Positives = 47/87 (54%)
Frame = +2
Query: 458 PKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVG 637
P + GG +AE+ C GGEQ F+ +I+ S + W+TS++ K NLK L +
Sbjct: 264 PTLNFGGQKAELWCQGGEQQFLANMIKQSRDYANQVLWFTSLVSKSDNLKPCYQLLKQLN 323
Query: 638 VTVVKTTEFVQGQTSRWGLAWSFVPPA 718
VKT E QG + LAWSF+ PA
Sbjct: 324 AVEVKTIEMTQGNKATRILAWSFLTPA 350
>sp|A6H0G2|RLMF_FLAPJ Ribosomal RNA large subunit methyltransferase F
OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rlmF
PE=3 SV=1
Length = 314
Score = 66 bits (159), Expect = 2e-010
Identities = 30/85 (35%), Positives = 49/85 (57%)
Frame = +2
Query: 455 NPKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGV 634
NP + GG E+ CDGGE F+T++I +SA + W+T+++ K+ NL + L V
Sbjct: 220 NPVLNFGGQNTELWCDGGEIGFITQMIYESAKYPMQVLWFTTLVSKRENLSSIYKTLNKV 279
Query: 635 GVTVVKTTEFVQGQTSRWGLAWSFV 709
+KT + QGQ + +AW+F+
Sbjct: 280 SAVEIKTIDMAQGQKNSRIVAWTFL 304
>sp|Q87Q26|RLMF_VIBPA Ribosomal RNA large subunit methyltransferase F OS=Vibrio
parahaemolyticus GN=rlmF PE=3 SV=1
Length = 375
Score = 66 bits (159), Expect = 2e-010
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +2
Query: 458 PKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVG 637
P + GG AE+ C+GGE AF+ R+ +S + W+T+++ KK N++ + +L +G
Sbjct: 280 PTLNFGGQNAELWCEGGEAAFIRRMANESQAFSSQVLWFTTLISKKDNVRPMRKQLEKLG 339
Query: 638 VTVVKTTEFVQGQTSRWGLAWSFV 709
V ++ E QGQ +AWSF+
Sbjct: 340 VKAIRVVEMSQGQKISRFMAWSFM 363
>sp|Q48MF3|RLMF_PSE14 Ribosomal RNA large subunit methyltransferase F
OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)
GN=rlmF PE=3 SV=2
Length = 328
Score = 65 bits (158), Expect = 3e-010
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +2
Query: 458 PKTSCGGTRAEMVCDGGEQAFVTRIIQDSAVLKQRFKWYTSMLGKKANLKLLISKLWGVG 637
P + GG E+ C+GGE FVTR+IQ+SA L + W+++++ K +NL + + L G
Sbjct: 237 PVLNFGGQSQELWCEGGEIGFVTRLIQESATLPSQVVWFSTLVSKASNLPPIQNALKKAG 296
Query: 638 VTVVKTTEFVQGQTSRWGLAWSFVPPA 718
VK E QGQ +AW+F+ A
Sbjct: 297 ALEVKVIEMGQGQKQSRFVAWTFLDKA 323
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 265,990,074,601
Number of Sequences: 518415
Number of Extensions: 265990074601
Number of Successful Extensions: 1725758359
Number of sequences better than 0.0: 0
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