Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN84740


BLASTX 7.6.2

Query= UN84740 /QuerySize=553
        (552 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabi...    212   3e-053
gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]     212   3e-053
gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT...    200   1e-049
gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fraga...     59   3e-007
gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunu...     54   8e-006

>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis
        thaliana]

          Length = 373

 Score =  212 bits (538), Expect = 3e-053
 Identities = 125/180 (69%), Positives = 132/180 (73%), Gaps = 23/180 (12%)
 Frame = +1

Query:   4 DKKLISSPSSATSIYDTRSNNSNHHHHHPPSSSDEISLFLRHIIDRSSPLPSYYSPATMT 183
           DKKLISS SS++S+YDTR    NHH HHPPSSSDEIS FLRHI DRSSPLPSYYSPAT T
Sbjct:  18 DKKLISS-SSSSSVYDTR---INHHLHHPPSSSDEISQFLRHIFDRSSPLPSYYSPATTT 73

Query: 184 T-----AVH--GEPHAGNSICFVSPQ-------TSKRSAGFSEVLVGSGVGSSSAAACYG 321
           T      VH  G+PHA NS   VS          SKR   FSEVL+G   GS SAAAC+G
Sbjct:  74 TTASLIGVHGSGDPHADNSRSLVSHHPPSDSVLMSKRVGDFSEVLIGG--GSGSAAACFG 131

Query: 322 FSGGGGGGGNNIAQGNSSGTRVSSSSVGASGNETDEYDCESEEGVEAVVDDELPSKSGPS 501
           FS   GGG NN  QGNSSGTRVSSSSVGASGNETDEYDCESEEG EAVVD+   SKSGPS
Sbjct: 132 FS---GGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPS 188

>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]

          Length = 415

 Score =  212 bits (538), Expect = 3e-053
 Identities = 125/180 (69%), Positives = 132/180 (73%), Gaps = 23/180 (12%)
 Frame = +1

Query:   4 DKKLISSPSSATSIYDTRSNNSNHHHHHPPSSSDEISLFLRHIIDRSSPLPSYYSPATMT 183
           DKKLISS SS++S+YDTR    NHH HHPPSSSDEIS FLRHI DRSSPLPSYYSPAT T
Sbjct:  18 DKKLISS-SSSSSVYDTR---INHHLHHPPSSSDEISQFLRHIFDRSSPLPSYYSPATTT 73

Query: 184 T-----AVH--GEPHAGNSICFVSPQ-------TSKRSAGFSEVLVGSGVGSSSAAACYG 321
           T      VH  G+PHA NS   VS          SKR   FSEVL+G   GS SAAAC+G
Sbjct:  74 TTASLIGVHGSGDPHADNSRSLVSHHPPSDSVLMSKRVGDFSEVLIGG--GSGSAAACFG 131

Query: 322 FSGGGGGGGNNIAQGNSSGTRVSSSSVGASGNETDEYDCESEEGVEAVVDDELPSKSGPS 501
           FS   GGG NN  QGNSSGTRVSSSSVGASGNETDEYDCESEEG EAVVD+   SKSGPS
Sbjct: 132 FS---GGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPS 188

>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119
        [Arabidopsis lyrata subsp. lyrata]

          Length = 354

 Score =  200 bits (506), Expect = 1e-049
 Identities = 114/172 (66%), Positives = 121/172 (70%), Gaps = 27/172 (15%)
 Frame = +1

Query:  28 SSATSIYDTRSNNSNHHHHHPPSSSDEISLFLRHIIDRSSPLPSYYSPATMTT------- 186
           SS++S+YDT   N   HHHHPPSSSDEIS FLRHI DRSSPLPSYYSPAT TT       
Sbjct:   9 SSSSSVYDTTRIN---HHHHPPSSSDEISQFLRHIFDRSSPLPSYYSPATTTTPTSMIGV 65

Query: 187 AVHGEPHAGNSICFVSPQ-------TSKRSAGFSEVLVGSGVGSSSAAACYGFSGGGGGG 345
            VHG+PHA NS   VS          SKR   FSEVL+G G       AC+GFS   GGG
Sbjct:  66 QVHGDPHADNSRSLVSHHPPSDSVLMSKRVGDFSEVLIGGG-------ACFGFS---GGG 115

Query: 346 GNNIAQGNSSGTRVSSSSVGASGNETDEYDCESEEGVEAVVDDELPSKSGPS 501
            NN AQGNSSGTRVSSSSVGASGNETDEYDCESEEG EAVVD+   SKSGPS
Sbjct: 116 NNNNAQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPS 167

>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x
        ananassa]

          Length = 298

 Score =  59 bits (141), Expect = 3e-007
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = +1

Query: 370 SSGTRVSSSSVGASGNETDEYDCESEEGVEAVVDDELPSKSGPSRS 507
           +SG  VSSSSVGAS NE DEYDCESEEG+EA+V++      G S S
Sbjct:  95 ASGPNVSSSSVGASENEADEYDCESEEGLEALVEEAAVKSGGRSSS 140

>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]

          Length = 386

 Score =  54 bits (129), Expect = 8e-006
 Identities = 29/41 (70%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = +1

Query: 385 VSSSSVGASGNETDEYDCESEEGVEAVVDDELPSKSGPSRS 507
           VSSSS GAS NETDEYDCESEEG+EA+V +E   K G  RS
Sbjct: 113 VSSSSFGASENETDEYDCESEEGLEALV-EEAAGKPGCGRS 152

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,456,871,604,025
Number of Sequences: 15229318
Number of Extensions: 1456871604025
Number of Successful Extensions: 434980938
Number of sequences better than 0.0: 0