BLASTX 7.6.2
Query= UN84951 /QuerySize=844
(843 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G46530.1 | Symbols: | FUNCTIONS IN: molecular... 76 3e-014
TAIR9_protein||AT1G29520.1 | Symbols: | AWPM-19-like membrane f... 68 7e-012
>TAIR9_protein||AT5G46530.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: AWPM-19-like
(InterPro:IPR008390); BEST Arabidopsis thaliana protein match is:
AWPM-19-like membrane family protein (TAIR:AT1G29520.1); Has 98 Blast
hits to 98 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink). | chr5:18875576-18876779 FORWARD
Length = 158
Score = 76 bits (185), Expect = 3e-014
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +2
Query: 119 MAEQRMQPVASLLLLLNFCMYAIVLGIGAWSMNKAISHGFHIG 247
M E +M+PVAS LL+LNFCMYAIVLGIGAWSMNKAI+HGF IG
Sbjct: 1 MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIG 43
>TAIR9_protein||AT1G29520.1 | Symbols: | AWPM-19-like membrane family protein |
chr1:10323735-10324525 FORWARD
Length = 159
Score = 68 bits (164), Expect = 7e-012
Identities = 33/52 (63%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 119 MAEQRMQPVASLLLLLNFCMYAIVLGIGAWSMNKAISHGFHIG-YLELGQDF 271
MA ++++PVAS LL+LNFCMY IVLGIG W+MN+AI HGF +G LEL F
Sbjct: 1 MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHF 52
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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