Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN84962


BLASTX 7.6.2

Query= UN84962 /QuerySize=766
        (765 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G26580.1 | Symbols:  | FUNCTIONS IN: molecular...    214   5e-056
TAIR9_protein||AT2G03470.1 | Symbols:  | myb family transcriptio...     51   6e-007
TAIR9_protein||AT2G03470.2 | Symbols:  | myb family transcriptio...     51   6e-007

>TAIR9_protein||AT1G26580.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        cellular_component unknown; EXPRESSED IN: 24 plant structures;
        EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein
        match is: myb family transcription factor / ELM2 domain-containing
        protein (TAIR:AT2G03470.1); Has 82 Blast hits to 82 proteins in 12
        species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 78;
        Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
        chr1:9185620-9187213 FORWARD

          Length = 494

 Score =  214 bits (544), Expect = 5e-056
 Identities = 121/201 (60%), Positives = 138/201 (68%), Gaps = 38/201 (18%)
 Frame = -3

Query: 763 RRRATQNRSLILDIDSDDDEWHGGYGGSLGTQYVEEDEEEEEDSAIESPLHQGTDKFNEK 584
           RRRA QNR+ ILDIDSDDDEWHG YGGS GT+YVEED   EEDSAIESPLHQGT    +K
Sbjct: 301 RRRAIQNRAFILDIDSDDDEWHGCYGGSSGTRYVEED---EEDSAIESPLHQGT----KK 353

Query: 583 VHPFHQEEGEEDVSVS--DNDDVDTREGG------------AEHVDRYSG*NEERLKVED 446
           V+P H EEGEEDVS S  D DD DT+EGG             E++DR+SG N ERL VED
Sbjct: 354 VYPLHHEEGEEDVSHSSNDEDDDDTKEGGTGLYDEHKMSSTVEYMDRFSGNNGERLNVED 413

Query: 445 DSYTTFELAHDALNSAWTNCTKKDETGVGEHQRKSKECSD------------TKVPTNGK 302
           DS T+FELA +A+     NC +KDET  GE Q+K K+C+D              VPTNGK
Sbjct: 414 DSCTSFELARNAV-----NCAEKDETVPGEQQKKLKDCNDPIDTKVWDASRCLNVPTNGK 468

Query: 301 DLQPTRSIMEEIFGHGSWGSK 239
           DLQPTR IMEEIFG+G W +K
Sbjct: 469 DLQPTRRIMEEIFGNGCWENK 489

>TAIR9_protein||AT2G03470.1 | Symbols:  | myb family transcription factor / ELM2
        domain-containing protein | chr2:1045694-1047130 REVERSE

          Length = 451

 Score =  51 bits (121), Expect = 6e-007
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
 Frame = -3

Query: 763 RRRATQNRSLILDIDSDDDEWHGGYGGSLGTQYVEEDEEEEEDSAIESPLHQGTDKFNEK 584
           RRR  QNR   LD+DSDDDEW   Y     T+ ++E++     S+ E    +     N+ 
Sbjct: 277 RRRGIQNRFKALDVDSDDDEWQVEYNIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSND- 335

Query: 583 VHPFHQEEGEEDVSVSDNDDVDT----REGGAEHVD 488
                +EE E+D S +D   VDT    R+G  E V+
Sbjct: 336 --DDEEEEEEDDSSSNDAHCVDTDKASRDGFGEEVN 369

>TAIR9_protein||AT2G03470.2 | Symbols:  | myb family transcription factor / ELM2
        domain-containing protein | chr2:1045694-1047130 REVERSE

          Length = 450

 Score =  51 bits (121), Expect = 6e-007
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
 Frame = -3

Query: 763 RRRATQNRSLILDIDSDDDEWHGGYGGSLGTQYVEEDEEEEEDSAIESPLHQGTDKFNEK 584
           RRR  QNR   LD+DSDDDEW   Y     T+ ++E++     S+ E    +     N+ 
Sbjct: 276 RRRGIQNRFKALDVDSDDDEWQVEYNIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSND- 334

Query: 583 VHPFHQEEGEEDVSVSDNDDVDT----REGGAEHVD 488
                +EE E+D S +D   VDT    R+G  E V+
Sbjct: 335 --DDEEEEEEDDSSSNDAHCVDTDKASRDGFGEEVN 368

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0