Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN00017

FASTA Sequence
Unigene ID: UN00017Length: 776 SSR 
GTCCGACAATCCGACCCTAGCTCCCTCACATCGTTAACCAGCGTCGTTCAGCAGCTTGAAGCTAAGCTAGGGTTAGACCTCACGGA
GAAGACTAGCTTCATCAGAGACCAGATCAATCTCCTCCTCCGTCCTCACCCACCACCCTCCTCCTCCTCTGCTTCCGCTTCCGCAT
CAACCGCACAACCTCCTCCTCCTCCGCCGTCTCAGCAGCTGCATTTCGGCGTCAATGTTCCGGGGAAAGGTCATTTTGCACTTCAA
CATCCGTCTCAATTCTCTGCTTCGCATTCTCAACAATACCCTCCTCATTTCGCTCTCCAGCCTCCTCCTCCTCCTTACCACTCTTA
TGACCTTAATTTCCGGCAGCCGTATCCGCCTTACATGCCGCCTATGCAGCACCAGCAGCACCAGCTACAGTCTCCGCGGCAAGGAC
CCTCTGTGCTGGTTTCACAAGCCTCTAAAGAAAGTGCTCCAGCTGGAACTAAAAGAAAGGGTGGTCCTGGAGGGTTGAACAAAGTG
TGTAGGGTCTCTCCAGAGCTTGAAGTTGTTGTTGGTGAACCTGCTCTTCCCAGAACTGGGATTGTGAGGCAGTTGTGGGCTTACAT
AAGGAAGAACAACCTCCAAGACCCGAGTAACAAGCGGAAGATCATATGTGATGATGCGTTGCGTGTGGTTTTTGAGTGTGATTGCA
CTGACATGTTCAAGATGAATAAGTTGCTTGCTAAGCATATCCTCCCGCTTGATCATCAAAGAATCTGGTCAAGCGAGCGGGCGAAA
GC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567661 SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana]5512e-054
CAA16786 putative protein [Arabidopsis thaliana]5512e-054
AAM61516 unknown [Arabidopsis thaliana]5512e-054
CAN72895 hypothetical protein VITISV_022315 [Vitis vinifera]5216e-051
CBI33113 unnamed protein product [Vitis vinifera]5208e-051

Swiss-Prot top hits (Blast detail)Scoree value
O74503 Upstream activation factor subunit spp271843e-013
Q08747 Upstream activation factor subunit UAF301736e-012
Q05024 Protein TRI11639e-011

TrEMBL top hits (Blast detail)Scoree value
O49641 Putative uncharacterized protein AT4g223605511e-054
Q8LFA6 Putative uncharacterized protein5511e-054
Q93YR5 Putative uncharacterized protein At4g223605511e-054
A5BZV2 Putative uncharacterized protein5214e-051
A9PEA5 Putative uncharacterized protein4784e-046

Arabidopsis top hits (Blast detail)Scoree value
AT4G22360.1 SWIB complex BAF60b domain-containing protein9891e-107
AT1G49520.1 SWIB complex BAF60b domain-containing protein2632e-023
AT3G19080.1 SWIB complex BAF60b domain-containing protein2524e-022
AT2G14880.1 SWIB complex BAF60b domain-containing protein1862e-014
AT4G34290.1 SWIB complex BAF60b domain-containing protein1852e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
91  50%

Unigene MembersMember information