 |
Information for unigene UN00033
| FASTA Sequence |
| Unigene ID: UN00033 | Length: 1303 |
SSR | | GGGTATCCAATGGGACGTTACTTACCTGCTTAAGTTTCTCAACAGTGTGTTGTTGGGATTCAGAATTTCAAACTCATATCCTTTTG
GGGGTTCTCTCGTTTCCATCCGCCTAAAATCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTCTCTATCCGCTCGCTCATCCAGGTTT
GGATTACAAAATGTTTGGTTTGAAGAAGCCCCTGGAAACACGACTCCCCAAGCATAATAAGCCTTCTCCTTCGGCTTCCAATCCTT
TTGATTCAGATGATGATATCAAACACACCTTGAAGCCATCTAACAAGATCTCCCCTCAGCCTTCTTCTCTACCTACCAAGAAGAAG
AGTCACAGCTTCAACCCTTTTGACGACGATGATGGCGAGGAGGAGGAGGTTGAGAAAAGATTCACTTCACCATCGAATTCGAACCC
CTCTTTCAAGAATCATTTCCGTGACTCGGGTGGTGTTGAGAACCAGTCGGTTCAACAACTCCAGAGCTACGCTGTGTACAAGTCTG
AGGAGACAACCAAGACGGTGCAAGGGTGTTTGAAAGTAGCGCAAGGGATGAGATCAGACGCTACCAGAACTTTGTTCATGCTGAAT
GAGCAAGGCGAGAAGATCACGAGGACTCACCTCAAGGCTGTTGACATCGATCGTGATCTCAGTCGGGGTGAGAAACTTCTTGGTAG
CCTCGGAGGCATTTTCTCAAGGACTTGGAAGCCTAAAAAGACTCGCTCCATTACCGGTCCTGTCATCACTAGAGGTGAATCCCCTA
AGAGAAGAGTTAACAACTTAGAGACTAGAGAAAAGCTGGGACTGAACCATCTACCCAAACCACATTCAAGAAGAACCCGTGAACCT
CTCCCTGAATCCGCTGATGCTTATCAGAAAATAGAGATGGAGAAAGCAAAGCAGGACGATGGACTTGCAGATTTGAGTGATCTACT
CGGTGAACTAAAGAACATGGCTGTTGATATGGGAACTGAAATCGAAAGGCAAAACAATGGACTTGATCATCTTCAAGACGATGTCG
ACGAGCTTAACTTCAGAGTGAAACAATCTAACCAACGAGCTCGCCGTTTACTCCGCAAGTAAAACCAGCCCATCCCCAAGAACCTG
TTCAGCTTCTCTTTTCTCTGTTTTTTGAATCTTATCAGAACATATAGATTTTAATAAAGTTTGAGACATTTGATTCCAGAAAACTG
CATCAAGTTTATTTAGATATGGAATTACAACTCTTTATCACCAGCATTTAGATACAACTAGAGCTTTCCCCGGGCTACGCCCGGGC
TGTTTCACAAATT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34130 unnamed protein product [Thellungiella halophila] | 1047 | 1e-111 |
| XP_002864724 synaptosomal-associated protein 33 [Arabidopsis lyrata subsp. lyrata] | 998 | 7e-106 |
| NP_200929 SNAP25 homologous protein SNAP33 [Arabidopsis thaliana] | 990 | 6e-105 |
| AAM62553 snap25a [Arabidopsis thaliana] | 981 | 6e-104 |
| XP_002514694 synaptosomal associated protein, putative [Ricinus communis] | 934 | 2e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7P9 SNAP25 homologous protein SNAP33 | 993 | 1e-106 |
| Q9SD96 SNAP25 homologous protein SNAP29 | 801 | 2e-084 |
| Q9LMG8 Putative SNAP25 homologous protein SNAP30 | 680 | 2e-070 |
| Q17QQ3 Synaptosomal-associated protein 25 | 128 | 2e-006 |
| P60878 Synaptosomal-associated protein 25 | 128 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RLS5 Synaptosomal associated protein, putative | 937 | 6e-099 |
| B9IE11 Predicted protein | 917 | 1e-096 |
| B9I2W3 Predicted protein | 829 | 2e-086 |
| C6TJG5 Putative uncharacterized protein | 775 | 3e-080 |
| C6T858 Putative uncharacterized protein | 701 | 1e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61210.1 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33); SNAP receptor/ protein binding | 994 | 7e-108 |
| AT5G07880.1 SNAP29; SNAP receptor | 802 | 1e-085 |
| AT1G13890.1 SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30); SNAP receptor | 681 | 1e-071 |
| AT3G09740.1 SYP71 (SYNTAXIN OF PLANTS 71); protein transporter | 120 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
