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Information for unigene UN00041
| FASTA Sequence |
| Unigene ID: UN00041 | Length: 1053 |
SSR | | GGATTCATTGCTTGCTGTGAAGAAAACATAGTGAGAGAGAGAGACAAAAATGGCGACGGTACCTCTGTTCACCCAGTTTCCATGCA
AAACTCTAGCTCCAAGCTCCTCCAACTCTAAACTCTAACGTATCTGTGGCGGAGAGAGAGTAGCAGAAGAAGCCATCGAATCAGTG
GAAGAGACGGAGCGGCTGAAGAGATCGCTAGCGGATTCTTTGTACGGGACAGATCGAGGTCTTAGCGCATCGAGCGAGACGAGAGC
CGAGATCAGTGAGCTAATCACGCAGCTCGAGTCCAACAACCCTAATCCAGCTCCGAACGATGCTCTGTTTCTCCTCAGCGGCAAAT
GGATTCTCGCTTACACGTCGTTCGTTGGTCTGTTCCCGTTGCTCTCACGTAGAATCTCACCGTTGGTCAAAGTGGATGAGATCTCA
CAAACCATCGACTCCGACAGCTTCACTGTACAAAACTCTGTCCGGTTCGCTGGTCCCCTTGCTACGACATCGTTTAGCACCAACGC
TAAGTTCGAAGTCCAAAGTCCAAAACGTGTCCAGATCAAGTTTGAGCAAGGTGTTATCGGGACTCCTCAGCTAACGGATTCGATAG
AGATCCCCGAGTTCGTGGAGGTTCTTGGTCAGAAAATCGATCTCAACCCCATTAGAGGATTACTCACGTCTGTCCAGGACACGGCT
TCTTCAGTGGCGAGAACCATTTCAAGCCAACCACCGTTGAAATTCTCTTTGCCTGCAGACAGAGCGCAGTCGTGGCTGCTCACGAC
TTATCTCGACAAAGACCTTCGGATCTCGAGAGGCGATGGTGGAAGCATTTTTGTGCTTATCAAAGAAGGCAGCTCTCTCTTAAACC
CTTAAAAAACATTGTAAAGTAAAATCTATATAGAACCATGTCTGTATTTAATAGTTAAGTGTTATTGTTGGAGAGTTATGATATGA
TGGTTGTTGTGTATTCAGGGTTTAAATGTTTGATAATTTTGGCTTATAAAGTTGTAAAAGGTCTCTGATACAGTATGTTATTATTG
CACAAACCGATTTTGTTACAG
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| GenBank top hits (Blast detail) | Score | e value |
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| Q94FZ9 RecName: Full=Plastid lipid-associated protein 1, chloroplastic; Flags: Precursor | 1113 | 2e-119 |
| AAK57561 plastid-lipid associated protein PAP1 [Brassica rapa subsp. campestris] | 1109 | 7e-119 |
| NP_192311 putative plastid-lipid-associated protein 1 [Arabidopsis thaliana] | 1100 | 7e-118 |
| AAD03693 fibrillin [Brassica napus] | 1098 | 1e-117 |
| XP_002872677 plastid lipid-associated protein 1, chloroplast precursor [Arabidopsis lyrata subsp. lyrata] | 1098 | 1e-117 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94FZ9 Plastid lipid-associated protein 1, chloroplastic | 1113 | 1e-120 |
| O81439 Probable plastid-lipid-associated protein 1, chloroplastic | 1100 | 3e-119 |
| O49629 Probable plastid-lipid-associated protein 2, chloroplastic | 1076 | 2e-116 |
| Q94KU6 Plastid lipid-associated protein 2, chloroplastic | 1061 | 1e-114 |
| P80471 Light-induced protein, chloroplastic | 921 | 2e-098 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9ZSZ9 Fibrillin (Fragment) | 1098 | 9e-118 |
| A5AKB1 Putative uncharacterized protein | 926 | 8e-098 |
| A9PJU9 Putative uncharacterized protein | 926 | 8e-098 |
| B9N8G9 Predicted protein | 926 | 8e-098 |
| A9CSJ8 Putative plastid lipid-associated protein (Fragment) | 921 | 3e-097 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G04020.1 FIB (FIBRILLIN); structural molecule | 1101 | 2e-120 |
| AT4G22240.1 plastid-lipid associated protein PAP, putative | 1077 | 1e-117 |
| AT2G35490.1 plastid-lipid associated protein PAP, putative | 605 | 7e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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