RadishBase

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Information for unigene UN00063

FASTA Sequence

Unigene ID: UN00063	Length: 1129	SSR
GGCCTTTACCCGAAAAATAAATAAGACAACAAAAAAGGAGAGAAGTCGACAGTGTGAAAAACGTATCTCTCTCTCTCTTCTTCCTG CTTCCTCGGTTTCATCGACCTCTTCTGCATTTGATCTGTCTAAACAATGGCGTCACTGTCTGCACCTTACGCCAAGATCTGTGCTC CGAACCAACGGTTCGGATCTATTCCTGGAAGAACCCGATGTCAGCCGCAACTCAATGGCGTCTCCTTTCTCTCCGATGTGTCTCAG AACCAATCTACAATCTGGAGGTTGCGTGCGACAACCAATGAGGTCGTTGTCTCTAACTCAACCCCAATGACTAACGGTAACGGTAA CGGGAAAGTGAAGAGCAATGTTCCTGAATCCGCCCAACTCTCTGACTTTATGGCTAGAGTCTCTGGTCTTCTTAAGCTTGTGGATT CAAGAGATATAGTGGAACTTGAACTGAAGCAGCTCGACTGTGAGATTGTTATTCGTAAGAAGGAAGCTTTACAGCAGCAGCAACCT GCACCACCACCAGCTCCAGTTTATCACTCTATGCCTCCTCCTCCAATGGCTCCATCTCAACCAGTTGCTTCTCCTGCTTCCTCCTC AGCCCCTGAAACAGTAAAACCAGCAACCCCACCTGCCTCTTCTCATCCTCCACTCAAGAGTCCTATGGCTGGTACTTTCTACAGAT CTCCTGGACCTGGTGAACCCCCTTTTGTCAAGGTTGGTGATAAGGTGCAGAAGGGTCAAGTTGTTTGTATTATCGAAGCTATGAAA CTAATGAATGAGATTGAGGCTGAGAAATCGGGAACCATCACTGAACTACTAGCTGAAGATGGAAAACCGGTTAGCGTTGACACGCC TCTGTTTACCATCGTGCCTTGATGCGTCATTTTAGCTGGTTCAGAACATCTTCAAAGTCTTGGTTTACCTAATACGGACATGCTGA AAAATCATTTAAGTGGTTATTCCGGTCTGGTTGTTTTTCCTAAACTGTCATCTTTTGTGAGAATCACGTAACGTATTAATATGCAT GTCTTTTAGAATAATTTCGACAAAACTATTCAGTTTTATAATGTGTTGCACTATCTCCCCTTGTTTTAGTAATTCAATAAATTAAC ATTATTTTCTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
CAA62264 Biotin carboxyl carrier protein [Brassica napus]	1004	1e-106
XP_002871669 hypothetical protein ARALYDRAFT_909527 [Arabidopsis lyrata subsp. lyrata]	981	5e-104
NP_568316 biotin carboxyl carrier protein of acetyl-CoA carboxylase 2 [Arabidopsis thaliana]	957	3e-101
AAS46758 biotin carboxyl carrier protein [Brassica napus]	949	3e-100
CAA62265 Biotin carboxyl carrier protein [Brassica napus]	910	9e-096

Swiss-Prot top hits (Blast detail)	Score	e value
Q9LLC1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic	957	1e-102
Q42783 Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic	551	2e-055
Q42533 Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic	550	2e-055
P37799 Biotin carboxyl carrier protein of acetyl-CoA carboxylase	288	5e-025
P0ABE0 Biotin carboxyl carrier protein of acetyl-CoA carboxylase	264	3e-022

TrEMBL top hits (Blast detail)	Score	e value
Q39349 Biotin carboxyl carrier protein	1004	8e-107
Q6QIW2 Biotin carboxyl carrier protein	949	2e-100
Q39350 Biotin carboxyl carrier protein	910	6e-096
Q39351 Biotin carboxyl carrier protein (Fragment)	638	2e-064
A9PBA1 Putative uncharacterized protein	606	1e-060

Arabidopsis top hits (Blast detail)	Score	e value
AT5G15530.1 BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2); biotin binding	958	9e-104
AT5G16390.1 CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase/ biotin binding	551	1e-056
AT5G16390.2 CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase/ biotin binding	450	7e-045
AT4G13340.1 leucine-rich repeat family protein / extensin family protein	127	2e-007
AT1G68690.1 ATP binding / protein kinase/ protein serine/threonine kinase	117	3e-006

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	4			100%

Unigene Members	Member information