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Information for unigene UN00093

FASTA Sequence
Unigene ID: UN00093Length: 1071  SNP
GCCATGGAGATCGAAGACGAGGAAGCTGAGAAACCCGAGGGATGGTTAGGTGATGAGCCTGAGGAGGTCGACGACCCAGAGGCGAC
CAAACCTGAAGATTGGGATGATGAGGAAGATGGTATGTGGGAGGCTCCAAAGGTTGATAACCCCAAGTGTGAAACAGCACCTGGTT
GCGGTGAGTGGAAGAGACCCACGAAGAAGAACCCTGCTTACAAGGGCAAGTGGAGTGCGCCTATGATTGACAACCCTGCTTACAAG
GGGATCTGGAAGCCCAGAGACATCCCTAACCCTGACTACTTTGAGCTAGACCGACCTGATTTCGAACCCATTGCGGCGATCGGTAT
TGAGATCTGGACGATGCAAGACGGTATCTTGTTTGACAACATGTTGATAGCGAAAGACGAGAAGGTCGCTGAGATTTACAGACAGA
CTACTTGGAAGCCGAAGTTCGATGTTGAGAAAGAGAAACAAAAGGCGGAAGAGGAGGCTGCTAGCTCTGCAGGTGGTCTCAAGAGC
TACCAGAAGGTTGTGTTCGACCTCTTGAACAAGGTTGCTGACATATCTTTCCTAAGTGCCTACAAGTCTAAGATCACTGAGCTGAT
TGAGAAAGCAGAGGAACAACCAAACTTAACCATTGGTGTTCTTGTCTCCATTGTCGTTGTTTTCTTCTCTCTCTTCATCAAGCTTA
TCTTCGGTGGCAAAAAGGCGGCGCCGGCAGCAGCTGTGGAGAAAAAGAAGAAGAAACCAGAAGTAGGAGAGAGCTCAAGCTCAAAG
AGTGAAGATGAGACGGAGAAGAAGGAAGAAACCGCTGCTCCTCGCAAAAGGCAACCCAGACGTGATAATTAAAAATAGTGGTTTTT
AGAATGTTTTCGAGATGTTGAAATTATTTTTGATTGTTACTTGTGTTATGGTCGGATTTTCTTTTCTGCTGTAAAACCAAGTTGGG
ATTAGCTAAATTGTAGTTTCTGTTACTTCTTTGTTTAGTTTCTCACAAATTGGGGTGGATACATTTGCCATTGTAGAGTTATTCGA
GTTGAGAAGTCATCTATTCACTGAACTCGGTTTATTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK84429 putative papillar cell-specific calnexin [Brassica napus]13373e-145
XP_002866454 calnexin 1 [Arabidopsis lyrata subsp. lyrata]12988e-141
XP_002866455 hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp. lyrata]12988e-141
NP_200987 calnexin 1 [Arabidopsis thaliana]12971e-140
NP_196351 calnexin2 [Arabidopsis thaliana]11572e-124

Swiss-Prot top hits (Blast detail)Scoree value
P29402 Calnexin homolog 112975e-142
Q38798 Calnexin homolog 211578e-126
Q39817 Calnexin homolog11075e-120
O82709 Calnexin homolog10637e-115
Q39994 Calnexin homolog9435e-101

TrEMBL top hits (Blast detail)Scoree value
Q7XAF7 Putative papillar cell-specific calnexin13372e-145
B7FLQ0 Putative uncharacterized protein11419e-123
Q5NT70 Calnexin11042e-118
Q4W5U7 Calnexin-like protein11014e-118
B6TNF1 Calnexin10711e-114

Arabidopsis top hits (Blast detail)Scoree value
AT5G61790.1 calnexin 1 (CNX1)13324e-147
AT5G07340.1 calnexin, putative11756e-129
AT1G56340.1 CRT1 (CALRETICULIN 1); calcium ion binding / unfolded protein binding3342e-031
AT1G56340.2 CRT1 (CALRETICULIN 1); calcium ion binding / unfolded protein binding3314e-031
AT1G09210.1 calreticulin 2 (CRT2)3181e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  29%
 
191  14%
 
113  43%
 
121  14%

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