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Information for unigene UN00117
| FASTA Sequence |
| Unigene ID: UN00117 | Length: 1397 |
SSR | | AGACATAGACCAGATCGAAGTGGCTTGCTTTAGCTCAGCTCCACTACACTGATCACAGCTCAGAGGTGATCTCCAGCAGGAGAAGC
AGTAGGAGGAGGAGGAGGAAGAGCAGCAATCGCTTCTTCTGCGCGCGTGGAAGCAAATGCTTCACATGTTTTCTTGAGCCAGTTGA
GGCCCATGGTAAGAAAACACCGGTACCATTACCGGTTCCCATCACACTGGGACTTGATAGTACCATTGGTTGAACCGGCGGTGGTG
CCATTATGACCATTGGTGGATGAAGGACTCCGAGCTTTGGCATCATTTCAAGTGAATGATCATAGCCATTTAGGTATGGAGTCGGG
GCCATTGAGTAGTGACATGGTTGTTGTTGCCACATTGTCATTACACCATCGTTGTGAGGACTGTTGTGGTGTATTTCAGGACGTAC
ACGAAAGAATGTGATGCTTACTCTTTTGGTTTGTGATGGGCACATTACATGCCTTGACATGTCTGCACTGTTTCCTCTCATCACCA
ACAGAGATCCTTGTTTGAGAGGAAGAGTTAAAGGTCCCTGAAGTTGCCTTCGTTGTCACTAGAGAGAATACGTCCAAAGGCCATTG
TGGATTCAGAGAGAACAAGAGTGGAGATTGGTTGTTCTAGATGAGGTGGTTTCAGGAAAGGCTGTGAGTGTTCACCCTCTTCAAAG
AAGTTGATGACACATCCATTTGGTCTCTTGTATTCTGGGATGAGTCTCCATGTGACAAAATGATCAATGACACTCTCGAGAAGTGG
TGGAATTGGCTCGATGTTAACTGCAAAAAGTCTCTCCCGGTCAAGCAACCACTAGCATCAAAACCATTTAGACTGAGTCCTGCAGA
TCAAAGCGATGATTCCTTACCAGAGTTGGTGTTTTCATCCTTCACATGGCCAAAGATTGGGACACCAAGCTGAACCAGCTCTCTCT
TGTTCCCTTTTATCTGTTTGTTGAACAGGATAAAGGTCTCACCTGTATTCATGATCATGAGTAAGCACCAGAAAACTCTTTAGAAA
GTCATGTGATAGGGTAAGAAAAAGTGACCTGAAAGCTTCCCGTTTTGGCCAGCTTCTCGGAGATCAGCGACAAGGTCTATAAGTTT
GGTTAACTCATCTTCTTTTAGTAACTCTTCATACATCTTTAGTCCTTTCACAACATTCACCTGTAAAAAAGATTCAATGAGCACTC
ATTTTACACCTCAAATGTTCCATCAGAAGATCTCATTAAATTAAGGTGAAAAAGAAAAACGAATTTCACTACTCACAGTGTGGCCT
TTCACTTGCTCTTTAGCTTGGAAACCTTTGATAAGTTTGATCTCAGTTGACCTTGCATCACAATCTTCATGGTTCTGACATATAAT
CTGTGGAGTATCCGCAGCAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192203 oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] | 626 | 1e-062 |
| XP_002874886 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 626 | 1e-062 |
| XP_002524804 conserved hypothetical protein [Ricinus communis] | 365 | 2e-032 |
| XP_002271361 PREDICTED: hypothetical protein [Vitis vinifera] | 356 | 2e-031 |
| CBI32322 unnamed protein product [Vitis vinifera] | 356 | 2e-031 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZT92 Putative uncharacterized protein AT4g02940 | 626 | 7e-063 |
| B9SFN5 Putative uncharacterized protein | 365 | 1e-032 |
| B9IA10 Predicted protein | 353 | 3e-031 |
| Q9ZU81 Putative uncharacterized protein At2g48080 | 343 | 5e-030 |
| B8AY31 Putative uncharacterized protein | 291 | 5e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 626 | 4e-065 |
| AT2G48080.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 343 | 3e-032 |
| AT1G14710.1 hydroxyproline-rich glycoprotein family protein | 185 | 5e-014 |
| AT1G14710.2 hydroxyproline-rich glycoprotein family protein | 185 | 5e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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