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Information for unigene UN00120
| FASTA Sequence |
| Unigene ID: UN00120 | Length: 1372 |
SSR | | GGCTCTCTCACTACTTTGCGCTTGTCTTTCTCTCTCTCTCTCTTCGAACTTTGGTTTTTGCTCTGTTTATTCACCAATGGCTACTG
TGTGGAGAAGGTTGATCAAGAGAGAGACGATCCCTCGTATCAGCCAAAGCACGAGGAAGCTCTTCTCCACCGAAGCATCTTCTTCT
TTCGCTGAGAGACTCAGAAACCTTCCCAAAGATTTCCCCTCCACTCAGGCTAAACGCGATGCTTCTCTGCTCATTGGAAGAACTCC
TCTCGTGTTTCTCAACAGAGTCACTGAAGGATGTGAAGCTTATATTGCAGCCAAGCAAGAACATTTCCAGCCTACTTGTAGCATCA
AGGACAGACCAGCTTTAGCTATGGTTGCAGATGCAGAGAAGAAAAATCTTATCACTCCTGGAAAAACAACATTGATAGAACCTACT
TCAGGAAACATGGGAATAAGTATGGCTTTCATGGCGGCTATGAAAGGGTACAGGATTATAATGACAATGCCTTCTTACACCAGTTT
GGAGAGGAGAGTGACTATGAGATCATTTGGTGCTGAGCTTGTCCTCACTGATCCAACCAAAGGAATGGGTGGAACCGTTAAGAAAG
CTTATGATCTCCTTGAGAGTACTCCTGATGCTCACATGTTGCAACAGTTTGCTAATCCAGCAAACACTCAGATTCATTTTGATACA
ACTGGTCCTGAGATTTGGGAAGATACACTTGGGAATGTTGATATCTTTGTGATGGGAATTGGTAGTGGGGGCACTGTCTCTGGTGT
TGGCCAATACCTTAAGTCTAAAAACCCTAATGTCAAGATATATGGAGTGGAGCCTGCTGAAAGCAACATACTCAACGGTGGCAAGC
CAGGTCCACATGCTATCACAGGCAATGGGGTTGGATTTAAACCGGATATATTGGATATGGATGTTATGGAGAGTGTTCTTGAGGTT
AGTAGTGAGGATGCTATAAAGATGGCTAGAGAATTGGCATTGAAAGAAGGTCTCATGGTTGGAATATCCTCTGGGGCTAACACTGT
GGCAGCAATTAGACTGGCCAAAATGCCAGAGAACAAAGGCAAACTAATTGTGACTATTCATGCGAGCTTTGGAGAGAGATATCTGT
CATCTGTTCTGTTTGATGAGATTAGGAAAGAAGCAGAAGCGATGAAGCCAGTTTCAGTGGACTGATTTGGTTTTGGTTTGGGTTGA
TATGAAGAAAAACTCTTTACTATATAATCTTCATCTTGCGGCACAAGATTGTGACACAACCCACCAAAAAGTGTCATAAATAATAT
ATGCTTGTTTTATATTGATGTTGAATACTGGAAGAATAATTATGTTAATGTTTGATATTGAAAATAAAAGCTTTTTCTGGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191703 cysteine synthase C1 [Arabidopsis thaliana] | 1726 | 3e-190 |
| XP_002876613 beta-substituted ala synthase 3_1 [Arabidopsis lyrata subsp. lyrata] | 1721 | 1e-189 |
| XP_002301362 predicted protein [Populus trichocarpa] | 1519 | 3e-166 |
| ABK95519 unknown [Populus trichocarpa] | 1513 | 1e-165 |
| XP_002320141 predicted protein [Populus trichocarpa] | 1498 | 8e-164 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P32260 Cysteine synthase, chloroplastic/chromoplastic | 1084 | 3e-117 |
| O81155 Cysteine synthase, chloroplastic/chromoplastic | 1056 | 6e-114 |
| Q9XEA8 Cysteine synthase | 1044 | 1e-112 |
| Q43725 Cysteine synthase, mitochondrial | 1042 | 2e-112 |
| Q00834 Cysteine synthase | 1034 | 2e-111 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S757 Cysteine synthase | 1726 | 2e-190 |
| B9GQA5 Cysteine synthase | 1519 | 2e-166 |
| A9PGL6 Cysteine synthase | 1513 | 1e-165 |
| B9I8L3 Cysteine synthase (Fragment) | 1498 | 5e-164 |
| A5AEP0 Cysteine synthase | 1497 | 7e-164 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G61440.1 CYSC1 (CYSTEINE SYNTHASE C1); L-3-cyanoalanine synthase/ cysteine synthase | 1727 | 8e-193 |
| AT3G61440.2 CYSC1 (CYSTEINE SYNTHASE C1); L-3-cyanoalanine synthase/ cysteine synthase | 1327 | 2e-146 |
| AT3G59760.1 OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase | 1043 | 2e-113 |
| AT3G59760.3 OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase | 1042 | 2e-113 |
| AT4G14880.1 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase | 1017 | 2e-110 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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